RNA–Protein interactions for RNA: ENST00000393952.3

LRFN4-202, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

TSL 5 BASIC

Gene LRFN4, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-202ENST00000393952 ESAMQ96AP7 390 aa23.65■■□□□ 1.38
LRFN4-202ENST00000393952 RHBDF1Q96CC6 855 aa23.65■■□□□ 1.38
LRFN4-202ENST00000393952 L3HYPDHQ96EM0 354 aa23.65■■□□□ 1.38
LRFN4-202ENST00000393952 PKP4Q99569 1192 aa23.65■■□□□ 1.38
LRFN4-202ENST00000393952 ERVK-6Q9BXR3 956 aa23.65■■□□□ 1.38
LRFN4-202ENST00000393952 TAAR2Q9P1P5 351 aa23.65■■□□□ 1.38
LRFN4-202ENST00000393952 PTBP2Q9UKA9 531 aaKnown RBP23.65■■□□□ 1.38
LRFN4-202ENST00000393952 PCOLCE2Q9UKZ9 415 aa23.65■■□□□ 1.38
LRFN4-202ENST00000393952 STX16-NPEPL1H3BU86 382 aa23.64■■□□□ 1.37
LRFN4-202ENST00000393952 STX16O14662 325 aa23.64■■□□□ 1.37
LRFN4-202ENST00000393952 KLF11O14901 512 aa23.64■■□□□ 1.37
LRFN4-202ENST00000393952 TAPBPO15533 448 aa23.64■■□□□ 1.37
LRFN4-202ENST00000393952 SHOX2O60902 331 aaPredicted RBP23.64■■□□□ 1.37
LRFN4-202ENST00000393952 EEF1DP29692 281 aaKnown RBP23.64■■□□□ 1.37
LRFN4-202ENST00000393952 HALP42357 657 aa23.64■■□□□ 1.37
LRFN4-202ENST00000393952 UNC50Q53HI1 259 aa23.64■■□□□ 1.37
LRFN4-202ENST00000393952 CDKL4Q5MAI5 379 aa23.64■■□□□ 1.37
LRFN4-202ENST00000393952 ATG16L1Q676U5 607 aa23.64■■□□□ 1.37
LRFN4-202ENST00000393952 RPS27LQ71UM5 84 aaKnown RBP23.64■■□□□ 1.37
LRFN4-202ENST00000393952 OR5K2Q8NHB8 316 aa23.64■■□□□ 1.37
LRFN4-202ENST00000393952 ZNF395Q9H8N7 513 aaPredicted RBP23.64■■□□□ 1.37
LRFN4-202ENST00000393952 SLCO1B3Q9NPD5 702 aa23.64■■□□□ 1.37
LRFN4-202ENST00000393952 ASB1Q9Y576 335 aa23.64■■□□□ 1.37
LRFN4-202ENST00000393952 H2AFYO75367 372 aaKnown RBP23.63■■□□□ 1.37
LRFN4-202ENST00000393952 GRK2P25098 689 aa23.63■■□□□ 1.37
LRFN4-202ENST00000393952 ARRB2P32121 409 aa23.63■■□□□ 1.37
LRFN4-202ENST00000393952 CCR10P46092 362 aa23.63■■□□□ 1.37
LRFN4-202ENST00000393952 NUBP1P53384 320 aa23.63■■□□□ 1.37
LRFN4-202ENST00000393952 PRKG2Q13237 762 aa23.63■■□□□ 1.37
LRFN4-202ENST00000393952 TUBB8Q3ZCM7 444 aa23.63■■□□□ 1.37
LRFN4-202ENST00000393952 DCUN1D3Q8IWE4 304 aa23.63■■□□□ 1.37
LRFN4-202ENST00000393952 LMX1AQ8TE12 382 aa23.63■■□□□ 1.37
LRFN4-202ENST00000393952 ZNF317Q96PQ6 595 aaPredicted RBP23.63■■□□□ 1.37
LRFN4-202ENST00000393952 FERD3LQ96RJ6 166 aa23.63■■□□□ 1.37
LRFN4-202ENST00000393952 TMEM79Q9BSE2 394 aa23.63■■□□□ 1.37
LRFN4-202ENST00000393952 TRIT1Q9H3H1 467 aaKnown RBP23.63■■□□□ 1.37
LRFN4-202ENST00000393952 WWOXQ9NZC7 414 aa23.63■■□□□ 1.37
LRFN4-202ENST00000393952 R4GN57 208 aa23.63■■□□□ 1.37
LRFN4-202ENST00000393952 MYO1CO00159 1063 aa23.62■■□□□ 1.37
LRFN4-202ENST00000393952 ITM2AO43736 263 aa23.62■■□□□ 1.37
LRFN4-202ENST00000393952 LYPLA1O75608 230 aaPredicted RBP23.62■■□□□ 1.37
LRFN4-202ENST00000393952 RPN2P04844 631 aa23.62■■□□□ 1.37
LRFN4-202ENST00000393952 VIMP08670 466 aaKnown RBP23.62■■□□□ 1.37
LRFN4-202ENST00000393952 MTHFD1P11586 935 aaKnown RBP23.62■■□□□ 1.37
LRFN4-202ENST00000393952 F3P13726 295 aa23.62■■□□□ 1.37
LRFN4-202ENST00000393952 HSPA7P48741 367 aa23.62■■□□□ 1.37
LRFN4-202ENST00000393952 SEC24CP53992 1094 aa23.62■■□□□ 1.37
LRFN4-202ENST00000393952 HNRNPKP61978 463 aaKnown RBP eCLIP23.62■■□□□ 1.37
LRFN4-202ENST00000393952 CFAP157Q5JU67 520 aa23.62■■□□□ 1.37
LRFN4-202ENST00000393952 FBXL8Q96CD0 374 aa23.62■■□□□ 1.37
LRFN4-202ENST00000393952 CCDC138Q96M89 665 aa23.62■■□□□ 1.37
LRFN4-202ENST00000393952 HGH1Q9BTY7 390 aa23.62■■□□□ 1.37
LRFN4-202ENST00000393952 C20orf27Q9GZN8 174 aa23.62■■□□□ 1.37
LRFN4-202ENST00000393952 ERVMER34-1Q9H9K5 563 aa23.62■■□□□ 1.37
LRFN4-202ENST00000393952 SPASTQ9UBP0 616 aa23.62■■□□□ 1.37
LRFN4-202ENST00000393952 TDRKHQ9Y2W6 561 aaKnown RBP23.62■■□□□ 1.37
LRFN4-202ENST00000393952 TRBV23OR9-2A0A075B6M9 112 aa23.61■■□□□ 1.37
LRFN4-202ENST00000393952 SUPT7LO94864 414 aa23.61■■□□□ 1.37
LRFN4-202ENST00000393952 RPS17P08708 135 aaKnown RBP23.61■■□□□ 1.37
LRFN4-202ENST00000393952 GRB7Q14451 532 aa23.61■■□□□ 1.37
LRFN4-202ENST00000393952 ELOCQ15369 112 aa23.61■■□□□ 1.37
LRFN4-202ENST00000393952 ZXDCQ2QGD7 858 aaPredicted RBP23.61■■□□□ 1.37
LRFN4-202ENST00000393952 TTC23LQ6PF05 361 aa23.61■■□□□ 1.37
LRFN4-202ENST00000393952 ATG14Q6ZNE5 492 aa23.61■■□□□ 1.37
LRFN4-202ENST00000393952 FAM47EQ6ZV65 393 aa23.61■■□□□ 1.37
LRFN4-202ENST00000393952 TBC1D21Q8IYX1 336 aa23.61■■□□□ 1.37
LRFN4-202ENST00000393952 LRRC34Q8IZ02 419 aa23.61■■□□□ 1.37
LRFN4-202ENST00000393952 TCAIMQ8N3R3 496 aa23.61■■□□□ 1.37
LRFN4-202ENST00000393952 ZNF548Q8NEK5 533 aaPredicted RBP23.61■■□□□ 1.37
LRFN4-202ENST00000393952 OR9A1PQ8NGU1 263 aa23.61■■□□□ 1.37
LRFN4-202ENST00000393952 MAGEC3Q8TD91 643 aa23.61■■□□□ 1.37
LRFN4-202ENST00000393952 UBTD2Q8WUN7 234 aa23.61■■□□□ 1.37
LRFN4-202ENST00000393952 GSTO2Q9H4Y5 243 aa23.61■■□□□ 1.37
LRFN4-202ENST00000393952 STOX2Q9P2F5 926 aaPredicted RBP23.61■■□□□ 1.37
LRFN4-202ENST00000393952 PLAGL1Q9UM63 463 aa23.61■■□□□ 1.37
LRFN4-202ENST00000393952 PRAMEF33A0A0G2JMD5 474 aa23.61■■□□□ 1.37
LRFN4-202ENST00000393952 TMEM114B3SHH9 223 aa23.61■■□□□ 1.37
LRFN4-202ENST00000393952 SNNO75324 88 aaPredicted RBP23.61■■□□□ 1.37
LRFN4-202ENST00000393952 SLC16A8O95907 504 aa23.61■■□□□ 1.37
LRFN4-202ENST00000393952 CFIP05156 583 aa23.61■■□□□ 1.37
LRFN4-202ENST00000393952 HOXD12P35452 270 aa23.61■■□□□ 1.37
LRFN4-202ENST00000393952 SLC1A6P48664 564 aa23.61■■□□□ 1.37
LRFN4-202ENST00000393952 ABCE1P61221 599 aaKnown RBP23.61■■□□□ 1.37
LRFN4-202ENST00000393952 RCN2Q14257 317 aa23.61■■□□□ 1.37
LRFN4-202ENST00000393952 DUOXA1Q1HG43 343 aa23.61■■□□□ 1.37
LRFN4-202ENST00000393952 RAD51AP1Q96B01 352 aa23.61■■□□□ 1.37
LRFN4-202ENST00000393952 CHMP6Q96FZ7 201 aa23.61■■□□□ 1.37
LRFN4-202ENST00000393952 NSUN5Q96P11 429 aaKnown RBP23.61■■□□□ 1.37
LRFN4-202ENST00000393952 C1QTNF3Q9BXJ4 246 aa23.61■■□□□ 1.37
LRFN4-202ENST00000393952 DRC3Q9H069 523 aa23.61■■□□□ 1.37
LRFN4-202ENST00000393952 FSCN3Q9NQT6 498 aa23.61■■□□□ 1.37
LRFN4-202ENST00000393952 ZNF624Q9P2J8 865 aaPredicted RBP23.61■■□□□ 1.37
LRFN4-202ENST00000393952 PCTPQ9UKL6 214 aa23.61■■□□□ 1.37
LRFN4-202ENST00000393952 NPHS1O60500 1241 aa23.6■■□□□ 1.37
LRFN4-202ENST00000393952 SDC3O75056 442 aa23.6■■□□□ 1.37
LRFN4-202ENST00000393952 PIAS2O75928 621 aa23.6■■□□□ 1.37
LRFN4-202ENST00000393952 GDF5P43026 501 aa23.6■■□□□ 1.37
LRFN4-202ENST00000393952 HNMTP50135 292 aa23.6■■□□□ 1.37
LRFN4-202ENST00000393952 OCRLQ01968 901 aa23.6■■□□□ 1.37
LRFN4-202ENST00000393952 KRT33BQ14525 404 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms