RNA–Protein interactions for RNA: ENST00000393824.7

CUX1-204, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-204ENST00000393824 NEU3Q9UQ49 428 aa10.93□□□□□ -0.66
CUX1-204ENST00000393824 A0A1W2PP18 115 aa10.92□□□□□ -0.66
CUX1-204ENST00000393824 A0A1W2PRU2 124 aa10.92□□□□□ -0.66
CUX1-204ENST00000393824 CARNS1A5YM72 827 aa10.92□□□□□ -0.66
CUX1-204ENST00000393824 RAD51BO15315 384 aa10.92□□□□□ -0.66
CUX1-204ENST00000393824 MT-CO1P00395 513 aa10.92□□□□□ -0.66
CUX1-204ENST00000393824 F11P03951 625 aa10.92□□□□□ -0.66
CUX1-204ENST00000393824 KRT8P05787 483 aa10.92□□□□□ -0.66
CUX1-204ENST00000393824 TPH1P17752 444 aa10.92□□□□□ -0.66
CUX1-204ENST00000393824 PAMP19021 973 aa10.92□□□□□ -0.66
CUX1-204ENST00000393824 HRH2P25021 359 aa10.92□□□□□ -0.66
CUX1-204ENST00000393824 SLC12A2P55011 1212 aa10.92□□□□□ -0.66
CUX1-204ENST00000393824 VBP1P61758 197 aa10.92□□□□□ -0.66
CUX1-204ENST00000393824 EML3Q32P44 896 aa10.92□□□□□ -0.66
CUX1-204ENST00000393824 CCDC58Q4VC31 144 aa10.92□□□□□ -0.66
CUX1-204ENST00000393824 RABL3Q5HYI8 236 aa10.92□□□□□ -0.66
CUX1-204ENST00000393824 SYT6Q5T7P8 510 aaPredicted RBP10.92□□□□□ -0.66
CUX1-204ENST00000393824 RSBN1Q5VWQ0 802 aaPredicted RBP10.92□□□□□ -0.66
CUX1-204ENST00000393824 TMEM236Q5W0B7 351 aa10.92□□□□□ -0.66
CUX1-204ENST00000393824 STEAP3Q658P3 488 aa10.92□□□□□ -0.66
CUX1-204ENST00000393824 CLEC6AQ6EIG7 209 aa10.92□□□□□ -0.66
CUX1-204ENST00000393824 TMC5Q6UXY8 1006 aa10.92□□□□□ -0.66
CUX1-204ENST00000393824 RPS27LQ71UM5 84 aaKnown RBP10.92□□□□□ -0.66
CUX1-204ENST00000393824 FKBP9P1Q75LS8 142 aa10.92□□□□□ -0.66
CUX1-204ENST00000393824 STK32CQ86UX6 486 aa10.92□□□□□ -0.66
CUX1-204ENST00000393824 P2RY8Q86VZ1 359 aa10.92□□□□□ -0.66
CUX1-204ENST00000393824 PHYKPLQ8IUZ5 450 aa10.92□□□□□ -0.66
CUX1-204ENST00000393824 DENND6AQ8IWF6 608 aa10.92□□□□□ -0.66
CUX1-204ENST00000393824 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.92□□□□□ -0.66
CUX1-204ENST00000393824 ZNF555Q8NEP9 628 aa10.92□□□□□ -0.66
CUX1-204ENST00000393824 ST13P5Q8NFI4 369 aaPredicted RBP10.92□□□□□ -0.66
CUX1-204ENST00000393824 GABPB2Q8TAK5 448 aaPredicted RBP10.92□□□□□ -0.66
CUX1-204ENST00000393824 RORBQ92753 470 aa10.92□□□□□ -0.66
CUX1-204ENST00000393824 TIFAQ96CG3 184 aa10.92□□□□□ -0.66
CUX1-204ENST00000393824 SLC39A13Q96H72 371 aa10.92□□□□□ -0.66
CUX1-204ENST00000393824 FCRL2Q96LA5 508 aaPredicted RBP10.92□□□□□ -0.66
CUX1-204ENST00000393824 AMBRA1Q9C0C7 1298 aa10.92□□□□□ -0.66
CUX1-204ENST00000393824 SMG9Q9H0W8 520 aaKnown RBP10.92□□□□□ -0.66
CUX1-204ENST00000393824 WDCPQ9H6R7 721 aa10.92□□□□□ -0.66
CUX1-204ENST00000393824 ABCB10Q9NRK6 738 aa10.92□□□□□ -0.66
CUX1-204ENST00000393824 SMPD4Q9NXE4 827 aa10.92□□□□□ -0.66
CUX1-204ENST00000393824 OSGIN1Q9UJX0 560 aa10.92□□□□□ -0.66
CUX1-204ENST00000393824 EVPLLA8MZ36 301 aa10.92□□□□□ -0.66
CUX1-204ENST00000393824 LINC01565O15544 149 aa10.92□□□□□ -0.66
CUX1-204ENST00000393824 KATNA1O75449 491 aa10.92□□□□□ -0.66
CUX1-204ENST00000393824 CCNKO75909 580 aa10.92□□□□□ -0.66
CUX1-204ENST00000393824 DLGAP3O95886 979 aa10.92□□□□□ -0.66
CUX1-204ENST00000393824 ABCB1P08183 1280 aaPredicted RBP10.92□□□□□ -0.66
CUX1-204ENST00000393824 FGF4P08620 206 aa10.92□□□□□ -0.66
CUX1-204ENST00000393824 AGXTP21549 392 aa10.92□□□□□ -0.66
CUX1-204ENST00000393824 GABRR2P28476 465 aa10.92□□□□□ -0.66
CUX1-204ENST00000393824 IL12AP29459 219 aa10.92□□□□□ -0.66
CUX1-204ENST00000393824 BMP8BP34820 402 aa10.92□□□□□ -0.66
CUX1-204ENST00000393824 SLC26A3P40879 764 aa10.92□□□□□ -0.66
CUX1-204ENST00000393824 EPHB3P54753 998 aa10.92□□□□□ -0.66
CUX1-204ENST00000393824 GNG2P59768 71 aa10.92□□□□□ -0.66
CUX1-204ENST00000393824 CTBP1Q13363 440 aa10.92□□□□□ -0.66
CUX1-204ENST00000393824 KRR1Q13601 381 aaKnown RBP10.92□□□□□ -0.66
CUX1-204ENST00000393824 ACAP2Q15057 778 aa10.92□□□□□ -0.66
CUX1-204ENST00000393824 SLC14A2Q15849 920 aa10.92□□□□□ -0.66
CUX1-204ENST00000393824 UBE2UQ5VVX9 321 aa10.92□□□□□ -0.66
CUX1-204ENST00000393824 DESI1Q6ICB0 168 aa10.92□□□□□ -0.66
CUX1-204ENST00000393824 ZDHHC13Q8IUH4 622 aa10.92□□□□□ -0.66
CUX1-204ENST00000393824 PPHLN1Q8NEY8 458 aaKnown RBP10.92□□□□□ -0.66
CUX1-204ENST00000393824 ANGPTL6Q8NI99 470 aa10.92□□□□□ -0.66
CUX1-204ENST00000393824 DNAJB14Q8TBM8 379 aa10.92□□□□□ -0.66
CUX1-204ENST00000393824 FBLIM1Q8WUP2 373 aa10.92□□□□□ -0.66
CUX1-204ENST00000393824 TSPAN17Q96FV3 270 aa10.92□□□□□ -0.66
CUX1-204ENST00000393824 ASB2Q96Q27 587 aa10.92□□□□□ -0.66
CUX1-204ENST00000393824 MBOAT4Q96T53 435 aa10.92□□□□□ -0.66
CUX1-204ENST00000393824 APOL5Q9BWW9 433 aa10.92□□□□□ -0.66
CUX1-204ENST00000393824 SIK2Q9H0K1 926 aa10.92□□□□□ -0.66
CUX1-204ENST00000393824 USE1Q9NZ43 259 aa10.92□□□□□ -0.66
CUX1-204ENST00000393824 MARCH2Q9P0N8 246 aa10.92□□□□□ -0.66
CUX1-204ENST00000393824 MSRAQ9UJ68 235 aa10.92□□□□□ -0.66
CUX1-204ENST00000393824 NOTCH4Q99466 2003 aa10.92□□□□□ -0.66
CUX1-204ENST00000393824 PABPN1LA6NDY0 278 aaKnown RBP10.91□□□□□ -0.66
CUX1-204ENST00000393824 MAN1A2O60476 641 aa10.91□□□□□ -0.66
CUX1-204ENST00000393824 PAGE1O75459 146 aa10.91□□□□□ -0.66
CUX1-204ENST00000393824 ANXA9O76027 345 aa10.91□□□□□ -0.66
CUX1-204ENST00000393824 CRYZL1O95825 349 aa10.91□□□□□ -0.66
CUX1-204ENST00000393824 KLKB1P03952 638 aa10.91□□□□□ -0.66
CUX1-204ENST00000393824 RAP2AP10114 183 aa10.91□□□□□ -0.66
CUX1-204ENST00000393824 ENPP1P22413 925 aa10.91□□□□□ -0.66
CUX1-204ENST00000393824 RYKP34925 604 aa10.91□□□□□ -0.66
CUX1-204ENST00000393824 TPD52P55327 224 aaPredicted RBP10.91□□□□□ -0.66
CUX1-204ENST00000393824 PPP2R2BQ00005 443 aa10.91□□□□□ -0.66
CUX1-204ENST00000393824 NFYCQ13952 458 aa10.91□□□□□ -0.66
CUX1-204ENST00000393824 CSHL1Q14406 222 aa10.91□□□□□ -0.66
CUX1-204ENST00000393824 PIK3R6Q5UE93 754 aa10.91□□□□□ -0.66
CUX1-204ENST00000393824 AGAP6Q5VW22 663 aa10.91□□□□□ -0.66
CUX1-204ENST00000393824 KIAA0930Q6ICG6 404 aaPredicted RBP10.91□□□□□ -0.66
CUX1-204ENST00000393824 MSANTD2Q6P1R3 559 aa10.91□□□□□ -0.66
CUX1-204ENST00000393824 GALNT7Q86SF2 657 aa10.91□□□□□ -0.66
CUX1-204ENST00000393824 NAT16Q8N8M0 369 aa10.91□□□□□ -0.66
CUX1-204ENST00000393824 SIMC1Q8NDZ2 872 aa10.91□□□□□ -0.66
CUX1-204ENST00000393824 TTC16Q8NEE8 873 aa10.91□□□□□ -0.66
CUX1-204ENST00000393824 IL17RDQ8NFM7 739 aa10.91□□□□□ -0.66
CUX1-204ENST00000393824 OR6F1Q8NGZ6 308 aa10.91□□□□□ -0.66
CUX1-204ENST00000393824 HCAR2Q8TDS4 363 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms