RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 MZF1P28698 734 aaPredicted RBP18.44■□□□□ 0.54
CBX1-202ENST00000393408 FCGRTP55899 365 aa18.44■□□□□ 0.54
CBX1-202ENST00000393408 INO80DQ53TQ3 878 aaPredicted RBP18.44■□□□□ 0.54
CBX1-202ENST00000393408 SGO1Q5FBB7 561 aa18.44■□□□□ 0.54
CBX1-202ENST00000393408 GCNT7Q6ZNI0 430 aa18.44■□□□□ 0.54
CBX1-202ENST00000393408 ANKS3Q6ZW76 656 aa18.44■□□□□ 0.54
CBX1-202ENST00000393408 CALHM3Q86XJ0 350 aa18.44■□□□□ 0.54
CBX1-202ENST00000393408 EID3Q8N140 333 aa18.44■□□□□ 0.54
CBX1-202ENST00000393408 ZCCHC7Q8N3Z6 543 aaKnown RBP18.44■□□□□ 0.54
CBX1-202ENST00000393408 PIH1D2Q8WWB5 315 aa18.44■□□□□ 0.54
CBX1-202ENST00000393408 OVCA2Q8WZ82 227 aa18.44■□□□□ 0.54
CBX1-202ENST00000393408 CEP295NLQ96MC4 621 aa18.44■□□□□ 0.54
CBX1-202ENST00000393408 FUNDC2Q9BWH2 189 aa18.44■□□□□ 0.54
CBX1-202ENST00000393408 RAD21L1Q9H4I0 556 aa18.44■□□□□ 0.54
CBX1-202ENST00000393408 FCF1Q9Y324 198 aaKnown RBP18.44■□□□□ 0.54
CBX1-202ENST00000393408 NAALAD2Q9Y3Q0 740 aa18.44■□□□□ 0.54
CBX1-202ENST00000393408 LOC730098B7Z3J9 87 aa18.44■□□□□ 0.54
CBX1-202ENST00000393408 H0Y626 953 aa18.44■□□□□ 0.54
CBX1-202ENST00000393408 K7EPI3 171 aa18.44■□□□□ 0.54
CBX1-202ENST00000393408 HS6ST1O60243 411 aa18.44■□□□□ 0.54
CBX1-202ENST00000393408 TRIM16O95361 564 aa18.44■□□□□ 0.54
CBX1-202ENST00000393408 EBLN1P0CF75 366 aa18.44■□□□□ 0.54
CBX1-202ENST00000393408 GGT5P36269 586 aa18.44■□□□□ 0.54
CBX1-202ENST00000393408 PSMD7P51665 324 aa18.44■□□□□ 0.54
CBX1-202ENST00000393408 USP39Q53GS9 565 aaKnown RBP18.44■□□□□ 0.54
CBX1-202ENST00000393408 ZNF691Q5VV52 312 aa18.44■□□□□ 0.54
CBX1-202ENST00000393408 SLC16A12Q6ZSM3 486 aa18.44■□□□□ 0.54
CBX1-202ENST00000393408 TMEM173Q86WV6 379 aaPredicted RBP18.44■□□□□ 0.54
CBX1-202ENST00000393408 CENPSQ8N2Z9 138 aa18.44■□□□□ 0.54
CBX1-202ENST00000393408 CHPT1Q8WUD6 406 aa18.44■□□□□ 0.54
CBX1-202ENST00000393408 USP7Q93009 1102 aa18.44■□□□□ 0.54
CBX1-202ENST00000393408 NCLNQ969V3 563 aa18.44■□□□□ 0.54
CBX1-202ENST00000393408 MYO19Q96H55 970 aa18.44■□□□□ 0.54
CBX1-202ENST00000393408 C3orf18Q9UK00 162 aa18.44■□□□□ 0.54
CBX1-202ENST00000393408 ZNF106Q9H2Y7 1883 aaKnown RBP18.44■□□□□ 0.54
CBX1-202ENST00000393408 BOLA2-SMG1P6H3BVE0 249 aa18.43■□□□□ 0.54
CBX1-202ENST00000393408 SLC1A7O00341 560 aa18.43■□□□□ 0.54
CBX1-202ENST00000393408 PGLSO95336 258 aa18.43■□□□□ 0.54
CBX1-202ENST00000393408 PRKACGP22612 351 aa18.43■□□□□ 0.54
CBX1-202ENST00000393408 CD97P48960 835 aa18.43■□□□□ 0.54
CBX1-202ENST00000393408 GZMMP51124 257 aa18.43■□□□□ 0.54
CBX1-202ENST00000393408 AQP6Q13520 282 aa18.43■□□□□ 0.54
CBX1-202ENST00000393408 ARMC12Q5T9G4 340 aa18.43■□□□□ 0.54
CBX1-202ENST00000393408 ZNF783Q6ZMS7 281 aa18.43■□□□□ 0.54
CBX1-202ENST00000393408 SNX20Q7Z614 316 aa18.43■□□□□ 0.54
CBX1-202ENST00000393408 C10orf111Q8N326 155 aa18.43■□□□□ 0.54
CBX1-202ENST00000393408 ZBTB2Q8N680 514 aa18.43■□□□□ 0.54
CBX1-202ENST00000393408 CLHC1Q8NHS4 586 aa18.43■□□□□ 0.54
CBX1-202ENST00000393408 FRS2Q8WU20 508 aa18.43■□□□□ 0.54
CBX1-202ENST00000393408 CCDC138Q96M89 665 aa18.43■□□□□ 0.54
CBX1-202ENST00000393408 CPPED1Q9BRF8 314 aaPredicted RBP18.43■□□□□ 0.54
CBX1-202ENST00000393408 TTPALQ9BTX7 342 aa18.43■□□□□ 0.54
CBX1-202ENST00000393408 ASB8Q9H765 288 aa18.43■□□□□ 0.54
CBX1-202ENST00000393408 WARS2Q9UGM6 360 aaKnown RBP18.43■□□□□ 0.54
CBX1-202ENST00000393408 TMEFF2Q9UIK5 374 aaPredicted RBP18.43■□□□□ 0.54
CBX1-202ENST00000393408 COQ6Q9Y2Z9 468 aa18.43■□□□□ 0.54
CBX1-202ENST00000393408 SH3GLB1Q9Y371 365 aa18.43■□□□□ 0.54
CBX1-202ENST00000393408 PCDHB14Q9Y5E9 798 aa18.43■□□□□ 0.54
CBX1-202ENST00000393408 OCM2P0CE71 109 aa18.43■□□□□ 0.54
CBX1-202ENST00000393408 OCMP0CE72 109 aaPredicted RBP18.43■□□□□ 0.54
CBX1-202ENST00000393408 BCKDHAP12694 445 aa18.43■□□□□ 0.54
CBX1-202ENST00000393408 IL1RNP18510 177 aa18.43■□□□□ 0.54
CBX1-202ENST00000393408 ITIH1P19827 911 aa18.43■□□□□ 0.54
CBX1-202ENST00000393408 HTR1BP28222 390 aa18.43■□□□□ 0.54
CBX1-202ENST00000393408 ACLYP53396 1101 aa18.43■□□□□ 0.54
CBX1-202ENST00000393408 PHC1P78364 1004 aa18.43■□□□□ 0.54
CBX1-202ENST00000393408 ELAVL2Q12926 359 aaKnown RBP18.43■□□□□ 0.54
CBX1-202ENST00000393408 NFATC2Q13469 925 aa18.43■□□□□ 0.54
CBX1-202ENST00000393408 NR1D2Q14995 579 aa18.43■□□□□ 0.54
CBX1-202ENST00000393408 SPCS2Q15005 226 aa18.43■□□□□ 0.54
CBX1-202ENST00000393408 GPRC6AQ5T6X5 926 aa18.43■□□□□ 0.54
CBX1-202ENST00000393408 NETO1Q8TDF5 533 aa18.43■□□□□ 0.54
CBX1-202ENST00000393408 RNF38Q9H0F5 515 aa18.43■□□□□ 0.54
CBX1-202ENST00000393408 PAK1IP1Q9NWT1 392 aaPredicted RBP18.43■□□□□ 0.54
CBX1-202ENST00000393408 C1orf109Q9NX04 203 aa18.43■□□□□ 0.54
CBX1-202ENST00000393408 SLC16A6O15403 523 aa18.42■□□□□ 0.54
CBX1-202ENST00000393408 BCAS1O75363 584 aaPredicted RBP18.42■□□□□ 0.54
CBX1-202ENST00000393408 SULT1C4O75897 302 aa18.42■□□□□ 0.54
CBX1-202ENST00000393408 SERPINA1P01009 418 aa18.42■□□□□ 0.54
CBX1-202ENST00000393408 PRKAR2AP13861 404 aaKnown RBP18.42■□□□□ 0.54
CBX1-202ENST00000393408 PCMT1P22061 227 aa18.42■□□□□ 0.54
CBX1-202ENST00000393408 PRKCZQ05513 592 aa18.42■□□□□ 0.54
CBX1-202ENST00000393408 LRIF1Q5T3J3 769 aa18.42■□□□□ 0.54
CBX1-202ENST00000393408 METTL2BQ6P1Q9 378 aaKnown RBP18.42■□□□□ 0.54
CBX1-202ENST00000393408 CRTC3Q6UUV7 619 aa18.42■□□□□ 0.54
CBX1-202ENST00000393408 DCP2Q8IU60 420 aaKnown RBP18.42■□□□□ 0.54
CBX1-202ENST00000393408 CHPFQ8IZ52 775 aa18.42■□□□□ 0.54
CBX1-202ENST00000393408 FBXO22Q8NEZ5 403 aa18.42■□□□□ 0.54
CBX1-202ENST00000393408 DNAJB8Q8NHS0 232 aa18.42■□□□□ 0.54
CBX1-202ENST00000393408 DGCR6LQ9BY27 220 aa18.42■□□□□ 0.54
CBX1-202ENST00000393408 TNKS2Q9H2K2 1166 aa18.42■□□□□ 0.54
CBX1-202ENST00000393408 SERHLQ9NQF3 203 aa18.42■□□□□ 0.54
CBX1-202ENST00000393408 ENPP5Q9UJA9 477 aa18.42■□□□□ 0.54
CBX1-202ENST00000393408 BAG5Q9UL15 447 aa18.42■□□□□ 0.54
CBX1-202ENST00000393408 B3GNT3Q9Y2A9 372 aa18.42■□□□□ 0.54
CBX1-202ENST00000393408 SNX5Q9Y5X3 404 aa18.42■□□□□ 0.54
CBX1-202ENST00000393408 THSD7BQ9C0I4 1608 aa18.42■□□□□ 0.54
CBX1-202ENST00000393408 PIKFYVEQ9Y2I7 2098 aa18.42■□□□□ 0.54
CBX1-202ENST00000393408 TRBV5-4A0A0C4DH59 114 aa18.42■□□□□ 0.54
CBX1-202ENST00000393408 C1orf232A0A0U1RR37 186 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms