RNA–Protein interactions for RNA: ENST00000392415.6

UBE2E3-201, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene UBE2E3, Length 1,347 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-201ENST00000392415 GPR19Q15760 415 aa19.94■□□□□ 0.78
UBE2E3-201ENST00000392415 TBR1Q16650 682 aa19.94■□□□□ 0.78
UBE2E3-201ENST00000392415 ANKRD20A4Q4UJ75 823 aa19.94■□□□□ 0.78
UBE2E3-201ENST00000392415 CTSL3PQ5NE16 218 aa19.94■□□□□ 0.78
UBE2E3-201ENST00000392415 RNF187Q5TA31 235 aaPredicted RBP19.94■□□□□ 0.78
UBE2E3-201ENST00000392415 TMEM135Q86UB9 458 aa19.94■□□□□ 0.78
UBE2E3-201ENST00000392415 LPGAT1Q92604 370 aa19.94■□□□□ 0.78
UBE2E3-201ENST00000392415 MED8Q96G25 268 aa19.94■□□□□ 0.78
UBE2E3-201ENST00000392415 BIRC8Q96P09 236 aa19.94■□□□□ 0.78
UBE2E3-201ENST00000392415 TRAPPC9Q96Q05 1148 aa19.94■□□□□ 0.78
UBE2E3-201ENST00000392415 SEMA4CQ9C0C4 833 aa19.94■□□□□ 0.78
UBE2E3-201ENST00000392415 LATS2Q9NRM7 1088 aa19.94■□□□□ 0.78
UBE2E3-201ENST00000392415 KCND1Q9NSA2 647 aa19.94■□□□□ 0.78
UBE2E3-201ENST00000392415 PADI1Q9ULC6 663 aa19.94■□□□□ 0.78
UBE2E3-201ENST00000392415 SNRNP200O75643 2136 aaKnown RBP19.94■□□□□ 0.78
UBE2E3-201ENST00000392415 SEC16AO15027 2179 aa19.93■□□□□ 0.78
UBE2E3-201ENST00000392415 TERTO14746 1132 aaKnown RBP19.93■□□□□ 0.78
UBE2E3-201ENST00000392415 KPNA5O15131 536 aa19.93■□□□□ 0.78
UBE2E3-201ENST00000392415 PFDN6O15212 129 aa19.93■□□□□ 0.78
UBE2E3-201ENST00000392415 KDM1AO60341 852 aa19.93■□□□□ 0.78
UBE2E3-201ENST00000392415 CCNYL3P0C7X3 344 aa19.93■□□□□ 0.78
UBE2E3-201ENST00000392415 F8A1P23610 371 aa19.93■□□□□ 0.78
UBE2E3-201ENST00000392415 EIF3BP55884 814 aaKnown RBP19.93■□□□□ 0.78
UBE2E3-201ENST00000392415 C19orf57Q0VDD7 668 aa19.93■□□□□ 0.78
UBE2E3-201ENST00000392415 DHX34Q14147 1143 aaKnown RBP19.93■□□□□ 0.78
UBE2E3-201ENST00000392415 TMED2Q15363 201 aa19.93■□□□□ 0.78
UBE2E3-201ENST00000392415 PAPD7Q5XG87 772 aaKnown RBP19.93■□□□□ 0.78
UBE2E3-201ENST00000392415 SPESP1Q6UW49 350 aa19.93■□□□□ 0.78
UBE2E3-201ENST00000392415 UNC5DQ6UXZ4 953 aa19.93■□□□□ 0.78
UBE2E3-201ENST00000392415 PPIL6Q8IXY8 311 aa19.93■□□□□ 0.78
UBE2E3-201ENST00000392415 ZNF843Q8N446 348 aa19.93■□□□□ 0.78
UBE2E3-201ENST00000392415 EXD3Q8N9H8 876 aa19.93■□□□□ 0.78
UBE2E3-201ENST00000392415 SLCO2A1Q92959 643 aa19.93■□□□□ 0.78
UBE2E3-201ENST00000392415 TRIM56Q9BRZ2 755 aaKnown RBP19.93■□□□□ 0.78
UBE2E3-201ENST00000392415 DDX47Q9H0S4 455 aaKnown RBP19.93■□□□□ 0.78
UBE2E3-201ENST00000392415 LHX9Q9NQ69 397 aa19.93■□□□□ 0.78
UBE2E3-201ENST00000392415 PCYOX1Q9UHG3 505 aa19.93■□□□□ 0.78
UBE2E3-201ENST00000392415 TLN1Q9Y490 2541 aaKnown RBP19.92■□□□□ 0.78
UBE2E3-201ENST00000392415 NKX2-8O15522 239 aa19.92■□□□□ 0.78
UBE2E3-201ENST00000392415 NTRK1P04629 796 aa19.92■□□□□ 0.78
UBE2E3-201ENST00000392415 RPN2P04844 631 aa19.92■□□□□ 0.78
UBE2E3-201ENST00000392415 CHRM5P08912 532 aaPredicted RBP19.92■□□□□ 0.78
UBE2E3-201ENST00000392415 DLSTP36957 453 aa19.92■□□□□ 0.78
UBE2E3-201ENST00000392415 GNG11P61952 73 aa19.92■□□□□ 0.78
UBE2E3-201ENST00000392415 ABRQ12979 859 aa19.92■□□□□ 0.78
UBE2E3-201ENST00000392415 PPP1R7Q15435 360 aa19.92■□□□□ 0.78
UBE2E3-201ENST00000392415 KYNUQ16719 465 aa19.92■□□□□ 0.78
UBE2E3-201ENST00000392415 CRTC2Q53ET0 693 aaPredicted RBP19.92■□□□□ 0.78
UBE2E3-201ENST00000392415 PLEKHS1Q5SXH7 462 aa19.92■□□□□ 0.78
UBE2E3-201ENST00000392415 RNASEH2BQ5TBB1 312 aaKnown RBP19.92■□□□□ 0.78
UBE2E3-201ENST00000392415 NEPROQ6NW34 567 aa19.92■□□□□ 0.78
UBE2E3-201ENST00000392415 OTOAQ7RTW8 1153 aa19.92■□□□□ 0.78
UBE2E3-201ENST00000392415 CILP2Q8IUL8 1156 aa19.92■□□□□ 0.78
UBE2E3-201ENST00000392415 FLVCR1-AS1Q8TAF5 88 aa19.92■□□□□ 0.78
UBE2E3-201ENST00000392415 STARD8Q92502 1023 aa19.92■□□□□ 0.78
UBE2E3-201ENST00000392415 ZNF669Q96BR6 464 aaPredicted RBP19.92■□□□□ 0.78
UBE2E3-201ENST00000392415 SIGLEC10Q96LC7 697 aa19.92■□□□□ 0.78
UBE2E3-201ENST00000392415 CATSPER2Q96P56 530 aa19.92■□□□□ 0.78
UBE2E3-201ENST00000392415 OR2A14Q96R47 310 aa19.92■□□□□ 0.78
UBE2E3-201ENST00000392415 MENTQ9BUN1 341 aa19.92■□□□□ 0.78
UBE2E3-201ENST00000392415 SPHK1Q9NYA1 384 aa19.92■□□□□ 0.78
UBE2E3-201ENST00000392415 CROTQ9UKG9 612 aa19.92■□□□□ 0.78
UBE2E3-201ENST00000392415 PYCARDQ9ULZ3 195 aa19.92■□□□□ 0.78
UBE2E3-201ENST00000392415 PLAGL1Q9UM63 463 aa19.92■□□□□ 0.78
UBE2E3-201ENST00000392415 ZCWPW2A0A1B0GU75 182 aa19.91■□□□□ 0.78
UBE2E3-201ENST00000392415 H3BMM5 538 aa19.91■□□□□ 0.78
UBE2E3-201ENST00000392415 MAP3K7O43318 606 aa19.91■□□□□ 0.78
UBE2E3-201ENST00000392415 SCRG1O75711 98 aa19.91■□□□□ 0.78
UBE2E3-201ENST00000392415 ESR1P03372 595 aa19.91■□□□□ 0.78
UBE2E3-201ENST00000392415 PVRP15151 417 aa19.91■□□□□ 0.78
UBE2E3-201ENST00000392415 UGT2B7P16662 529 aa19.91■□□□□ 0.78
UBE2E3-201ENST00000392415 FMO4P31512 558 aa19.91■□□□□ 0.78
UBE2E3-201ENST00000392415 RAB28P51157 221 aa19.91■□□□□ 0.78
UBE2E3-201ENST00000392415 MC1RQ01726 317 aa19.91■□□□□ 0.78
UBE2E3-201ENST00000392415 COL9A2Q14055 689 aaPredicted RBP19.91■□□□□ 0.78
UBE2E3-201ENST00000392415 CENPUQ71F23 418 aa19.91■□□□□ 0.78
UBE2E3-201ENST00000392415 CREG2Q8IUH2 290 aa19.91■□□□□ 0.78
UBE2E3-201ENST00000392415 DCUN1D3Q8IWE4 304 aa19.91■□□□□ 0.78
UBE2E3-201ENST00000392415 AGGF1Q8N302 714 aaeCLIP19.91■□□□□ 0.78
UBE2E3-201ENST00000392415 CFAP61Q8NHU2 1237 aa19.91■□□□□ 0.78
UBE2E3-201ENST00000392415 ARHGAP9Q9BRR9 750 aa19.91■□□□□ 0.78
UBE2E3-201ENST00000392415 FANCEQ9HB96 536 aa19.91■□□□□ 0.78
UBE2E3-201ENST00000392415 IL1RAPL1Q9NZN1 696 aa19.91■□□□□ 0.78
UBE2E3-201ENST00000392415 KCND3Q9UK17 655 aa19.91■□□□□ 0.78
UBE2E3-201ENST00000392415 CRYL1Q9Y2S2 319 aa19.91■□□□□ 0.78
UBE2E3-201ENST00000392415 ZNF462Q96JM2 2506 aa19.9■□□□□ 0.78
UBE2E3-201ENST00000392415 CPNE3O75131 537 aaKnown RBP19.9■□□□□ 0.78
UBE2E3-201ENST00000392415 NIPSNAP2O75323 286 aa19.9■□□□□ 0.78
UBE2E3-201ENST00000392415 USP1O94782 785 aa19.9■□□□□ 0.78
UBE2E3-201ENST00000392415 PKLRP30613 574 aa19.9■□□□□ 0.78
UBE2E3-201ENST00000392415 PTK6Q13882 451 aa19.9■□□□□ 0.78
UBE2E3-201ENST00000392415 GRB7Q14451 532 aa19.9■□□□□ 0.78
UBE2E3-201ENST00000392415 HOOK3Q86VS8 718 aa19.9■□□□□ 0.78
UBE2E3-201ENST00000392415 TMEM126BQ8IUX1 230 aa19.9■□□□□ 0.78
UBE2E3-201ENST00000392415 GSDMBQ8TAX9 411 aa19.9■□□□□ 0.78
UBE2E3-201ENST00000392415 NAPGQ99747 312 aaPredicted RBP19.9■□□□□ 0.78
UBE2E3-201ENST00000392415 CHRNA10Q9GZZ6 450 aa19.9■□□□□ 0.78
UBE2E3-201ENST00000392415 AKIRIN1Q9H9L7 192 aaPredicted RBP19.9■□□□□ 0.78
UBE2E3-201ENST00000392415 INTS10Q9NVR2 710 aaKnown RBP19.9■□□□□ 0.78
UBE2E3-201ENST00000392415 VPS9D1Q9Y2B5 631 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms