RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 AIM2O14862 343 aa11.16□□□□□ -0.62
SMARCAL1-203ENST00000392128 POP7O75817 140 aaKnown RBP11.16□□□□□ -0.62
SMARCAL1-203ENST00000392128 CLDN9O95484 217 aa11.16□□□□□ -0.62
SMARCAL1-203ENST00000392128 GPR89BP0CG08 455 aa11.16□□□□□ -0.62
SMARCAL1-203ENST00000392128 TRIM23P36406 574 aa11.16□□□□□ -0.62
SMARCAL1-203ENST00000392128 HTR6P50406 440 aa11.16□□□□□ -0.62
SMARCAL1-203ENST00000392128 ERVK-8P63133 956 aa11.16□□□□□ -0.62
SMARCAL1-203ENST00000392128 GRIK2Q13002 908 aa11.16□□□□□ -0.62
SMARCAL1-203ENST00000392128 KIF19Q2TAC6 998 aa11.16□□□□□ -0.62
SMARCAL1-203ENST00000392128 TMEM259Q4ZIN3 620 aa11.16□□□□□ -0.62
SMARCAL1-203ENST00000392128 Q6ZSR9 355 aa11.16□□□□□ -0.62
SMARCAL1-203ENST00000392128 NET1Q7Z628 596 aaPredicted RBP11.16□□□□□ -0.62
SMARCAL1-203ENST00000392128 MIER2Q8N344 545 aa11.16□□□□□ -0.62
SMARCAL1-203ENST00000392128 TP53I13Q8NBR0 393 aaPredicted RBP11.16□□□□□ -0.62
SMARCAL1-203ENST00000392128 CFAP61Q8NHU2 1237 aa11.16□□□□□ -0.62
SMARCAL1-203ENST00000392128 GANCQ8TET4 914 aa11.16□□□□□ -0.62
SMARCAL1-203ENST00000392128 MSANTD3Q96H12 275 aa11.16□□□□□ -0.62
SMARCAL1-203ENST00000392128 GAS2L1Q99501 681 aaPredicted RBP11.16□□□□□ -0.62
SMARCAL1-203ENST00000392128 SLC25A23Q9BV35 468 aa11.16□□□□□ -0.62
SMARCAL1-203ENST00000392128 CCDC167Q9P0B6 97 aa11.16□□□□□ -0.62
SMARCAL1-203ENST00000392128 SLC7A8Q9UHI5 535 aa11.16□□□□□ -0.62
SMARCAL1-203ENST00000392128 FZD4Q9ULV1 537 aa11.16□□□□□ -0.62
SMARCAL1-203ENST00000392128 KIF1CO43896 1103 aaKnown RBP11.16□□□□□ -0.62
SMARCAL1-203ENST00000392128 PEX11AO75192 247 aa11.16□□□□□ -0.62
SMARCAL1-203ENST00000392128 SNRPB2P08579 225 aaKnown RBP11.16□□□□□ -0.62
SMARCAL1-203ENST00000392128 ADPRHP54922 357 aa11.16□□□□□ -0.62
SMARCAL1-203ENST00000392128 FGL2Q14314 439 aa11.16□□□□□ -0.62
SMARCAL1-203ENST00000392128 ABRAXAS2Q15018 415 aa11.16□□□□□ -0.62
SMARCAL1-203ENST00000392128 IRF4Q15306 451 aa11.16□□□□□ -0.62
SMARCAL1-203ENST00000392128 MAP7D1Q3KQU3 841 aa11.16□□□□□ -0.62
SMARCAL1-203ENST00000392128 ATP6AP1LQ52LC2 224 aa11.16□□□□□ -0.62
SMARCAL1-203ENST00000392128 C6orf136Q5SQH8 315 aa11.16□□□□□ -0.62
SMARCAL1-203ENST00000392128 PGM2L1Q6PCE3 622 aa11.16□□□□□ -0.62
SMARCAL1-203ENST00000392128 SCIMPQ6UWF3 145 aa11.16□□□□□ -0.62
SMARCAL1-203ENST00000392128 DSELQ8IZU8 1212 aa11.16□□□□□ -0.62
SMARCAL1-203ENST00000392128 OR14C36Q8NHC7 312 aa11.16□□□□□ -0.62
SMARCAL1-203ENST00000392128 CLPTM1LQ96KA5 538 aa11.16□□□□□ -0.62
SMARCAL1-203ENST00000392128 MAGEB10Q96LZ2 347 aaPredicted RBP11.16□□□□□ -0.62
SMARCAL1-203ENST00000392128 BRINP2Q9C0B6 783 aa11.16□□□□□ -0.62
SMARCAL1-203ENST00000392128 UBE2ZQ9H832 354 aaPredicted RBP11.16□□□□□ -0.62
SMARCAL1-203ENST00000392128 MBNL1Q9NR56 388 aaKnown RBP11.16□□□□□ -0.62
SMARCAL1-203ENST00000392128 DNAJC11Q9NVH1 559 aa11.16□□□□□ -0.62
SMARCAL1-203ENST00000392128 AIG1Q9NVV5 245 aa11.16□□□□□ -0.62
SMARCAL1-203ENST00000392128 PRPF19Q9UMS4 504 aaKnown RBP11.16□□□□□ -0.62
SMARCAL1-203ENST00000392128 TMEM98Q9Y2Y6 226 aa11.16□□□□□ -0.62
SMARCAL1-203ENST00000392128 RNF11Q9Y3C5 154 aa11.16□□□□□ -0.62
SMARCAL1-203ENST00000392128 GPR45Q9Y5Y3 372 aa11.16□□□□□ -0.62
SMARCAL1-203ENST00000392128 DNMT3AQ9Y6K1 912 aaPredicted RBP11.16□□□□□ -0.62
SMARCAL1-203ENST00000392128 CIB2O75838 187 aa11.15□□□□□ -0.62
SMARCAL1-203ENST00000392128 C1orf105O95561 183 aa11.15□□□□□ -0.62
SMARCAL1-203ENST00000392128 BDKRB1P46663 353 aa11.15□□□□□ -0.62
SMARCAL1-203ENST00000392128 GTF2A1P52655 376 aaPredicted RBP11.15□□□□□ -0.62
SMARCAL1-203ENST00000392128 PFN3P60673 137 aa11.15□□□□□ -0.62
SMARCAL1-203ENST00000392128 TBL3Q12788 808 aaKnown RBP11.15□□□□□ -0.62
SMARCAL1-203ENST00000392128 RPA4Q13156 261 aa11.15□□□□□ -0.62
SMARCAL1-203ENST00000392128 INPP5AQ14642 412 aa11.15□□□□□ -0.62
SMARCAL1-203ENST00000392128 FBXO43Q4G163 708 aa11.15□□□□□ -0.62
SMARCAL1-203ENST00000392128 NEK5Q6P3R8 708 aa11.15□□□□□ -0.62
SMARCAL1-203ENST00000392128 PAOXQ6QHF9 649 aa11.15□□□□□ -0.62
SMARCAL1-203ENST00000392128 CRTC3Q6UUV7 619 aa11.15□□□□□ -0.62
SMARCAL1-203ENST00000392128 USP30Q70CQ3 517 aa11.15□□□□□ -0.62
SMARCAL1-203ENST00000392128 FUNDC1Q8IVP5 155 aa11.15□□□□□ -0.62
SMARCAL1-203ENST00000392128 PGAM4Q8N0Y7 254 aa11.15□□□□□ -0.62
SMARCAL1-203ENST00000392128 SFRP1Q8N474 314 aa11.15□□□□□ -0.62
SMARCAL1-203ENST00000392128 OXR1Q8N573 874 aa11.15□□□□□ -0.62
SMARCAL1-203ENST00000392128 SNX31Q8N9S9 440 aa11.15□□□□□ -0.62
SMARCAL1-203ENST00000392128 L3MBTL4Q8NA19 623 aa11.15□□□□□ -0.62
SMARCAL1-203ENST00000392128 OR9I1Q8NGQ6 314 aa11.15□□□□□ -0.62
SMARCAL1-203ENST00000392128 USP7Q93009 1102 aa11.15□□□□□ -0.62
SMARCAL1-203ENST00000392128 PHF7Q9BWX1 381 aaPredicted RBP11.15□□□□□ -0.62
SMARCAL1-203ENST00000392128 LGR4Q9BXB1 951 aa11.15□□□□□ -0.62
SMARCAL1-203ENST00000392128 MRPL1Q9BYD6 325 aaKnown RBP11.15□□□□□ -0.62
SMARCAL1-203ENST00000392128 SLC6A17Q9H1V8 727 aa11.15□□□□□ -0.62
SMARCAL1-203ENST00000392128 WDR26Q9H7D7 661 aa11.15□□□□□ -0.62
SMARCAL1-203ENST00000392128 ACTR8Q9H981 624 aa11.15□□□□□ -0.62
SMARCAL1-203ENST00000392128 PREBQ9HCU5 417 aa11.15□□□□□ -0.62
SMARCAL1-203ENST00000392128 TMEM45AQ9NWC5 275 aa11.15□□□□□ -0.62
SMARCAL1-203ENST00000392128 STOX2Q9P2F5 926 aaPredicted RBP11.15□□□□□ -0.62
SMARCAL1-203ENST00000392128 CCL27Q9Y4X3 112 aa11.15□□□□□ -0.62
SMARCAL1-203ENST00000392128 A0A1W2PQU0 124 aa11.15□□□□□ -0.63
SMARCAL1-203ENST00000392128 KRT87PA6NCN2 255 aa11.15□□□□□ -0.63
SMARCAL1-203ENST00000392128 LSM1O15116 133 aaKnown RBP11.15□□□□□ -0.63
SMARCAL1-203ENST00000392128 RNGTTO60942 597 aaKnown RBP11.15□□□□□ -0.63
SMARCAL1-203ENST00000392128 ULK1O75385 1050 aa11.15□□□□□ -0.63
SMARCAL1-203ENST00000392128 PAK4O96013 591 aaPredicted RBP11.15□□□□□ -0.63
SMARCAL1-203ENST00000392128 CCND1P24385 295 aa11.15□□□□□ -0.63
SMARCAL1-203ENST00000392128 SGCGQ13326 291 aa11.15□□□□□ -0.63
SMARCAL1-203ENST00000392128 ART3Q13508 389 aa11.15□□□□□ -0.63
SMARCAL1-203ENST00000392128 KPNB1Q14974 876 aaKnown RBP11.15□□□□□ -0.63
SMARCAL1-203ENST00000392128 SMU1Q2TAY7 513 aa11.15□□□□□ -0.63
SMARCAL1-203ENST00000392128 TRMT5Q32P41 509 aaKnown RBP11.15□□□□□ -0.63
SMARCAL1-203ENST00000392128 C6orf163Q5TEZ5 329 aa11.15□□□□□ -0.63
SMARCAL1-203ENST00000392128 TRIM46Q7Z4K8 759 aa11.15□□□□□ -0.63
SMARCAL1-203ENST00000392128 KBTBD6Q86V97 674 aa11.15□□□□□ -0.63
SMARCAL1-203ENST00000392128 LRRTM4Q86VH4 590 aa11.15□□□□□ -0.63
SMARCAL1-203ENST00000392128 MAGEC3Q8TD91 643 aa11.15□□□□□ -0.63
SMARCAL1-203ENST00000392128 WDR60Q8WVS4 1066 aa11.15□□□□□ -0.63
SMARCAL1-203ENST00000392128 PYCR2Q96C36 320 aa11.15□□□□□ -0.63
SMARCAL1-203ENST00000392128 SIPA1Q96FS4 1042 aa11.15□□□□□ -0.63
SMARCAL1-203ENST00000392128 PKP4Q99569 1192 aa11.15□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms