RNA–Protein interactions for RNA: ENST00000391944.7

ERCC2-203, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC2, Length 2,334 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-203ENST00000391944 NANOGQ9H9S0 305 aa18.65■□□□□ 0.58
ERCC2-203ENST00000391944 ASIC5Q9NY37 505 aa18.65■□□□□ 0.58
ERCC2-203ENST00000391944 SCOCQ9UIL1 159 aa18.65■□□□□ 0.58
ERCC2-203ENST00000391944 ITM2BQ9Y287 266 aa18.65■□□□□ 0.58
ERCC2-203ENST00000391944 C2orf16Q68DN1 1984 aa18.65■□□□□ 0.58
ERCC2-203ENST00000391944 H0Y858 1186 aa18.65■□□□□ 0.58
ERCC2-203ENST00000391944 RSL1D1O76021 490 aaKnown RBP18.65■□□□□ 0.58
ERCC2-203ENST00000391944 CASP2P42575 452 aa18.65■□□□□ 0.58
ERCC2-203ENST00000391944 NRIP1P48552 1158 aa18.65■□□□□ 0.58
ERCC2-203ENST00000391944 KIAA0040Q15053 153 aa18.65■□□□□ 0.58
ERCC2-203ENST00000391944 CPSF6Q16630 551 aaKnown RBP eCLIP18.65■□□□□ 0.58
ERCC2-203ENST00000391944 DUSP6Q16828 381 aa18.65■□□□□ 0.58
ERCC2-203ENST00000391944 IMPG1Q17R60 797 aa18.65■□□□□ 0.58
ERCC2-203ENST00000391944 FNDC3BQ53EP0 1204 aaKnown RBP18.65■□□□□ 0.58
ERCC2-203ENST00000391944 C9orf64Q5T6V5 341 aa18.65■□□□□ 0.58
ERCC2-203ENST00000391944 LCN8Q6JVE9 175 aa18.65■□□□□ 0.58
ERCC2-203ENST00000391944 SLC2A7Q6PXP3 512 aa18.65■□□□□ 0.58
ERCC2-203ENST00000391944 PRR23BQ6ZRT6 265 aa18.65■□□□□ 0.58
ERCC2-203ENST00000391944 GALNT13Q8IUC8 556 aa18.65■□□□□ 0.58
ERCC2-203ENST00000391944 GOLM1Q8NBJ4 401 aa18.65■□□□□ 0.58
ERCC2-203ENST00000391944 FGF13Q92913 245 aa18.65■□□□□ 0.58
ERCC2-203ENST00000391944 COQ10AQ96MF6 247 aa18.65■□□□□ 0.58
ERCC2-203ENST00000391944 LRTM1Q9HBL6 345 aa18.65■□□□□ 0.58
ERCC2-203ENST00000391944 C15orf38-AP3S2A0A0A6YYH1 394 aa18.64■□□□□ 0.57
ERCC2-203ENST00000391944 VARSP26640 1264 aaKnown RBP18.64■□□□□ 0.57
ERCC2-203ENST00000391944 GSK3BP49841 420 aa18.64■□□□□ 0.57
ERCC2-203ENST00000391944 EEFSECP57772 596 aaKnown RBP18.64■□□□□ 0.57
ERCC2-203ENST00000391944 TMEM115Q12893 351 aaPredicted RBP18.64■□□□□ 0.57
ERCC2-203ENST00000391944 EIF4HQ15056 248 aaKnown RBP18.64■□□□□ 0.57
ERCC2-203ENST00000391944 NEK5Q6P3R8 708 aa18.64■□□□□ 0.57
ERCC2-203ENST00000391944 ARPINQ7Z6K5 226 aa18.64■□□□□ 0.57
ERCC2-203ENST00000391944 HID1Q8IV36 788 aa18.64■□□□□ 0.57
ERCC2-203ENST00000391944 L3MBTL4Q8NA19 623 aa18.64■□□□□ 0.57
ERCC2-203ENST00000391944 TRIM8Q9BZR9 551 aa18.64■□□□□ 0.57
ERCC2-203ENST00000391944 MUC13Q9H3R2 512 aa18.64■□□□□ 0.57
ERCC2-203ENST00000391944 ALG2Q9H553 416 aa18.64■□□□□ 0.57
ERCC2-203ENST00000391944 SFXN1Q9H9B4 322 aa18.64■□□□□ 0.57
ERCC2-203ENST00000391944 INTS7Q9NVH2 962 aaKnown RBP18.64■□□□□ 0.57
ERCC2-203ENST00000391944 ARMC1Q9NVT9 282 aa18.64■□□□□ 0.57
ERCC2-203ENST00000391944 EGFL7Q9UHF1 273 aa18.64■□□□□ 0.57
ERCC2-203ENST00000391944 KCNE1BA0A087WTH5 132 aa18.63■□□□□ 0.57
ERCC2-203ENST00000391944 EDDM13A0A1B0GTR0 161 aa18.63■□□□□ 0.57
ERCC2-203ENST00000391944 TMEM202A6NGA9 273 aa18.63■□□□□ 0.57
ERCC2-203ENST00000391944 HEPACAM2A8MVW5 462 aa18.63■□□□□ 0.57
ERCC2-203ENST00000391944 SPINT1O43278 529 aa18.63■□□□□ 0.57
ERCC2-203ENST00000391944 TSPAN6O43657 245 aa18.63■□□□□ 0.57
ERCC2-203ENST00000391944 SEC22BO75396 215 aa18.63■□□□□ 0.57
ERCC2-203ENST00000391944 LYNP07948 512 aa18.63■□□□□ 0.57
ERCC2-203ENST00000391944 GSTM1P09488 218 aa18.63■□□□□ 0.57
ERCC2-203ENST00000391944 FSHRP23945 695 aa18.63■□□□□ 0.57
ERCC2-203ENST00000391944 ITGB7P26010 798 aa18.63■□□□□ 0.57
ERCC2-203ENST00000391944 PRLHRP49683 370 aa18.63■□□□□ 0.57
ERCC2-203ENST00000391944 METAP1P53582 386 aa18.63■□□□□ 0.57
ERCC2-203ENST00000391944 CTSCP53634 463 aa18.63■□□□□ 0.57
ERCC2-203ENST00000391944 GSTM4Q03013 218 aa18.63■□□□□ 0.57
ERCC2-203ENST00000391944 FOLH1Q04609 750 aa18.63■□□□□ 0.57
ERCC2-203ENST00000391944 LIPEQ05469 1076 aa18.63■□□□□ 0.57
ERCC2-203ENST00000391944 C9orf50Q5SZB4 431 aa18.63■□□□□ 0.57
ERCC2-203ENST00000391944 DLEU7Q6UYE1 221 aa18.63■□□□□ 0.57
ERCC2-203ENST00000391944 CYP2U1Q7Z449 544 aa18.63■□□□□ 0.57
ERCC2-203ENST00000391944 PTRH1Q86Y79 214 aaKnown RBP18.63■□□□□ 0.57
ERCC2-203ENST00000391944 LRTOMTQ8WZ04 291 aa18.63■□□□□ 0.57
ERCC2-203ENST00000391944 OR8D1Q8WZ84 308 aa18.63■□□□□ 0.57
ERCC2-203ENST00000391944 PYCR2Q96C36 320 aa18.63■□□□□ 0.57
ERCC2-203ENST00000391944 DTD2Q96FN9 168 aa18.63■□□□□ 0.57
ERCC2-203ENST00000391944 WRAP53Q9BUR4 548 aaKnown RBP18.63■□□□□ 0.57
ERCC2-203ENST00000391944 CXorf56Q9H5V9 222 aa18.63■□□□□ 0.57
ERCC2-203ENST00000391944 C1orf109Q9NX04 203 aa18.63■□□□□ 0.57
ERCC2-203ENST00000391944 DLGAP2Q9P1A6 1054 aa18.63■□□□□ 0.57
ERCC2-203ENST00000391944 CNOT11Q9UKZ1 510 aaKnown RBP18.63■□□□□ 0.57
ERCC2-203ENST00000391944 SLC22A14Q9Y267 594 aa18.63■□□□□ 0.57
ERCC2-203ENST00000391944 ZNF839A8K0R7 811 aa18.63■□□□□ 0.57
ERCC2-203ENST00000391944 RNASEH1O60930 286 aaKnown RBP18.63■□□□□ 0.57
ERCC2-203ENST00000391944 ATG13O75143 517 aa18.63■□□□□ 0.57
ERCC2-203ENST00000391944 PDYNP01213 254 aa18.63■□□□□ 0.57
ERCC2-203ENST00000391944 UBTFL6P0CB48 400 aaPredicted RBP18.63■□□□□ 0.57
ERCC2-203ENST00000391944 HLA-EP13747 358 aa18.63■□□□□ 0.57
ERCC2-203ENST00000391944 PTGR1Q14914 329 aa18.63■□□□□ 0.57
ERCC2-203ENST00000391944 AAK1Q2M2I8 961 aa18.63■□□□□ 0.57
ERCC2-203ENST00000391944 CACHD1Q5VU97 1274 aa18.63■□□□□ 0.57
ERCC2-203ENST00000391944 PIP4K2CQ8TBX8 421 aa18.63■□□□□ 0.57
ERCC2-203ENST00000391944 CANT1Q8WVQ1 401 aa18.63■□□□□ 0.57
ERCC2-203ENST00000391944 FBXL8Q96CD0 374 aa18.63■□□□□ 0.57
ERCC2-203ENST00000391944 MTFMTQ96DP5 389 aaKnown RBP18.63■□□□□ 0.57
ERCC2-203ENST00000391944 CCM2Q9BSQ5 444 aa18.63■□□□□ 0.57
ERCC2-203ENST00000391944 CCM2LQ9NUG4 571 aaPredicted RBP18.63■□□□□ 0.57
ERCC2-203ENST00000391944 DNAJC11Q9NVH1 559 aa18.63■□□□□ 0.57
ERCC2-203ENST00000391944 SNX6Q9UNH7 406 aa18.63■□□□□ 0.57
ERCC2-203ENST00000391944 TCF20Q9UGU0 1960 aaKnown RBP18.63■□□□□ 0.57
ERCC2-203ENST00000391944 PSIP1O75475 530 aaKnown RBP18.62■□□□□ 0.57
ERCC2-203ENST00000391944 DGKQP52824 942 aa18.62■□□□□ 0.57
ERCC2-203ENST00000391944 KCNC3Q14003 757 aa18.62■□□□□ 0.57
ERCC2-203ENST00000391944 NLRP8Q86W28 1048 aa18.62■□□□□ 0.57
ERCC2-203ENST00000391944 SPPL2CQ8IUH8 684 aa18.62■□□□□ 0.57
ERCC2-203ENST00000391944 GLB1L3Q8NCI6 653 aaPredicted RBP18.62■□□□□ 0.57
ERCC2-203ENST00000391944 VN1R2Q8NFZ6 395 aa18.62■□□□□ 0.57
ERCC2-203ENST00000391944 NUDT8Q8WV74 236 aa18.62■□□□□ 0.57
ERCC2-203ENST00000391944 GLMNQ92990 594 aa18.62■□□□□ 0.57
ERCC2-203ENST00000391944 ARRDC3Q96B67 414 aa18.62■□□□□ 0.57
ERCC2-203ENST00000391944 TMEM74Q96NL1 305 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms