RNA–Protein interactions for RNA: ENST00000384709.1

RNU6-541P-201, Transcript of RNA, U6 small nuclear 541, pseudogene, humanhuman

BASIC

Gene RNU6-541P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-541P-201ENST00000384709 LSMEM2Q8N112 164 aa2.03□□□□□ -2.08
RNU6-541P-201ENST00000384709 OR13J1Q8NGT2 312 aa2.03□□□□□ -2.08
RNU6-541P-201ENST00000384709 OR2AJ1Q8NGZ0 328 aa2.03□□□□□ -2.08
RNU6-541P-201ENST00000384709 EXD1Q8NHP7 514 aa2.03□□□□□ -2.08
RNU6-541P-201ENST00000384709 PRPF31Q8WWY3 499 aaKnown RBP2.03□□□□□ -2.08
RNU6-541P-201ENST00000384709 IRGQQ8WZA9 623 aa2.03□□□□□ -2.08
RNU6-541P-201ENST00000384709 DYRK2Q92630 601 aa2.03□□□□□ -2.08
RNU6-541P-201ENST00000384709 DHX58Q96C10 678 aa2.03□□□□□ -2.08
RNU6-541P-201ENST00000384709 MOCOSQ96EN8 888 aa2.03□□□□□ -2.08
RNU6-541P-201ENST00000384709 RSRC1Q96IZ7 334 aaKnown RBP2.03□□□□□ -2.08
RNU6-541P-201ENST00000384709 LINC00479Q96M42 142 aa2.03□□□□□ -2.08
RNU6-541P-201ENST00000384709 PAFAH2Q99487 392 aa2.03□□□□□ -2.08
RNU6-541P-201ENST00000384709 MAK16Q9BXY0 300 aaKnown RBP2.03□□□□□ -2.08
RNU6-541P-201ENST00000384709 UBA5Q9GZZ9 404 aa2.03□□□□□ -2.08
RNU6-541P-201ENST00000384709 WDR13Q9H1Z4 485 aa2.03□□□□□ -2.08
RNU6-541P-201ENST00000384709 CPVLQ9H3G5 476 aa2.03□□□□□ -2.08
RNU6-541P-201ENST00000384709 FGF21Q9NSA1 209 aa2.03□□□□□ -2.08
RNU6-541P-201ENST00000384709 HAUS2Q9NVX0 235 aa2.03□□□□□ -2.08
RNU6-541P-201ENST00000384709 ASIC3Q9UHC3 531 aa2.03□□□□□ -2.08
RNU6-541P-201ENST00000384709 IL17BQ9UHF5 180 aa2.03□□□□□ -2.08
RNU6-541P-201ENST00000384709 RASAL2Q9UJF2 1139 aa2.03□□□□□ -2.08
RNU6-541P-201ENST00000384709 GPR34Q9UPC5 381 aa2.03□□□□□ -2.08
RNU6-541P-201ENST00000384709 COL5A2P05997 1499 aaPredicted RBP2.02□□□□□ -2.09
RNU6-541P-201ENST00000384709 IGKV3D-15A0A087WSY6 115 aa2.02□□□□□ -2.09
RNU6-541P-201ENST00000384709 A0A1B0GVY2 172 aa2.02□□□□□ -2.09
RNU6-541P-201ENST00000384709 hCG_1807616A0A1W2PRN6 198 aa2.02□□□□□ -2.09
RNU6-541P-201ENST00000384709 ANKUB1A6NFN9 424 aa2.02□□□□□ -2.09
RNU6-541P-201ENST00000384709 PLOD2O00469 737 aa2.02□□□□□ -2.09
RNU6-541P-201ENST00000384709 CTDSP2O14595 271 aa2.02□□□□□ -2.09
RNU6-541P-201ENST00000384709 DCXO43602 365 aa2.02□□□□□ -2.09
RNU6-541P-201ENST00000384709 GJB3O75712 270 aa2.02□□□□□ -2.09
RNU6-541P-201ENST00000384709 VTNP04004 478 aa2.02□□□□□ -2.09
RNU6-541P-201ENST00000384709 IGHV4-31P0DP07 118 aa2.02□□□□□ -2.09
RNU6-541P-201ENST00000384709 VPREB1P12018 145 aa2.02□□□□□ -2.09
RNU6-541P-201ENST00000384709 GP1BBP13224 206 aa2.02□□□□□ -2.09
RNU6-541P-201ENST00000384709 MAP2K2P36507 400 aa2.02□□□□□ -2.09
RNU6-541P-201ENST00000384709 CASP2P42575 452 aa2.02□□□□□ -2.09
RNU6-541P-201ENST00000384709 MAGEA11P43364 429 aa2.02□□□□□ -2.09
RNU6-541P-201ENST00000384709 PSMC4P43686 418 aa2.02□□□□□ -2.09
RNU6-541P-201ENST00000384709 CDH11P55287 796 aa2.02□□□□□ -2.09
RNU6-541P-201ENST00000384709 MAZP56270 477 aaKnown RBP2.02□□□□□ -2.09
RNU6-541P-201ENST00000384709 STK4Q13043 487 aa2.02□□□□□ -2.09
RNU6-541P-201ENST00000384709 KRT33BQ14525 404 aa2.02□□□□□ -2.09
RNU6-541P-201ENST00000384709 TAF13Q15543 124 aa2.02□□□□□ -2.09
RNU6-541P-201ENST00000384709 NTRK2Q16620 822 aa2.02□□□□□ -2.09
RNU6-541P-201ENST00000384709 ZFP69Q49AA0 526 aa2.02□□□□□ -2.09
RNU6-541P-201ENST00000384709 CBWD6Q4V339 395 aa2.02□□□□□ -2.09
RNU6-541P-201ENST00000384709 CBWD3Q5JTY5 395 aa2.02□□□□□ -2.09
RNU6-541P-201ENST00000384709 SPDYCQ5MJ68 293 aa2.02□□□□□ -2.09
RNU6-541P-201ENST00000384709 RNASEH2BQ5TBB1 312 aaKnown RBP2.02□□□□□ -2.09
RNU6-541P-201ENST00000384709 TEX38Q6PEX7 206 aa2.02□□□□□ -2.09
RNU6-541P-201ENST00000384709 TMCO3Q6UWJ1 677 aa2.02□□□□□ -2.09
RNU6-541P-201ENST00000384709 ZNF843Q8N446 348 aa2.02□□□□□ -2.09
RNU6-541P-201ENST00000384709 DCLK2Q8N568 766 aa2.02□□□□□ -2.09
RNU6-541P-201ENST00000384709 OR2T11Q8NH01 316 aa2.02□□□□□ -2.09
RNU6-541P-201ENST00000384709 PHLDA1Q8WV24 401 aaPredicted RBP2.02□□□□□ -2.09
RNU6-541P-201ENST00000384709 LPGAT1Q92604 370 aa2.02□□□□□ -2.09
RNU6-541P-201ENST00000384709 ZNF653Q96CK0 615 aa2.02□□□□□ -2.09
RNU6-541P-201ENST00000384709 ART5Q96L15 291 aa2.02□□□□□ -2.09
RNU6-541P-201ENST00000384709 ZNF599Q96NL3 588 aa2.02□□□□□ -2.09
RNU6-541P-201ENST00000384709 MS4A10Q96PG2 267 aa2.02□□□□□ -2.09
RNU6-541P-201ENST00000384709 KRT12Q99456 494 aa2.02□□□□□ -2.09
RNU6-541P-201ENST00000384709 BARD1Q99728 777 aaKnown RBP2.02□□□□□ -2.09
RNU6-541P-201ENST00000384709 INTS9Q9NV88 658 aaKnown RBP2.02□□□□□ -2.09
RNU6-541P-201ENST00000384709 OSER1Q9NX31 292 aa2.02□□□□□ -2.09
RNU6-541P-201ENST00000384709 PTTG2Q9NZH5 202 aa2.02□□□□□ -2.09
RNU6-541P-201ENST00000384709 CACNG5Q9UF02 275 aa2.02□□□□□ -2.09
RNU6-541P-201ENST00000384709 TUBE1Q9UJT0 475 aa2.02□□□□□ -2.09
RNU6-541P-201ENST00000384709 GRID1Q9ULK0 1009 aa2.02□□□□□ -2.09
RNU6-541P-201ENST00000384709 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP2.02□□□□□ -2.09
RNU6-541P-201ENST00000384709 KIAA1217Q5T5P2 1943 aa2.01□□□□□ -2.09
RNU6-541P-201ENST00000384709 PCDH11YQ9BZA8 1340 aa2.01□□□□□ -2.09
RNU6-541P-201ENST00000384709 A0A1W2PPQ1 181 aa2.01□□□□□ -2.09
RNU6-541P-201ENST00000384709 HYKKA2RU49 373 aa2.01□□□□□ -2.09
RNU6-541P-201ENST00000384709 SH2B2O14492 632 aaPredicted RBP2.01□□□□□ -2.09
RNU6-541P-201ENST00000384709 PTGESO14684 152 aa2.01□□□□□ -2.09
RNU6-541P-201ENST00000384709 TSPAN1O60635 241 aa2.01□□□□□ -2.09
RNU6-541P-201ENST00000384709 TYMPP19971 482 aa2.01□□□□□ -2.09
RNU6-541P-201ENST00000384709 GCH1P30793 250 aa2.01□□□□□ -2.09
RNU6-541P-201ENST00000384709 SLC9A3P48764 834 aa2.01□□□□□ -2.09
RNU6-541P-201ENST00000384709 SNX16P57768 344 aa2.01□□□□□ -2.09
RNU6-541P-201ENST00000384709 PSMC6P62333 389 aa2.01□□□□□ -2.09
RNU6-541P-201ENST00000384709 PLA2G7Q13093 441 aa2.01□□□□□ -2.09
RNU6-541P-201ENST00000384709 PRKG2Q13237 762 aa2.01□□□□□ -2.09
RNU6-541P-201ENST00000384709 TMEM187Q14656 261 aa2.01□□□□□ -2.09
RNU6-541P-201ENST00000384709 ITPRIPL2Q3MIP1 535 aa2.01□□□□□ -2.09
RNU6-541P-201ENST00000384709 GTDC1Q4AE62 458 aa2.01□□□□□ -2.09
RNU6-541P-201ENST00000384709 FFAR4Q5NUL3 377 aa2.01□□□□□ -2.09
RNU6-541P-201ENST00000384709 ITPRIPL1Q6GPH6 555 aa2.01□□□□□ -2.09
RNU6-541P-201ENST00000384709 PRR27Q6MZM9 219 aa2.01□□□□□ -2.09
RNU6-541P-201ENST00000384709 COMMD2Q86X83 199 aa2.01□□□□□ -2.09
RNU6-541P-201ENST00000384709 MAML2Q8IZL2 1156 aaPredicted RBP2.01□□□□□ -2.09
RNU6-541P-201ENST00000384709 ZNF383Q8NA42 475 aa2.01□□□□□ -2.09
RNU6-541P-201ENST00000384709 ZNF485Q8NCK3 441 aa2.01□□□□□ -2.09
RNU6-541P-201ENST00000384709 NPEPL1Q8NDH3 523 aa2.01□□□□□ -2.09
RNU6-541P-201ENST00000384709 ZNF248Q8NDW4 579 aa2.01□□□□□ -2.09
RNU6-541P-201ENST00000384709 PRSS33Q8NF86 280 aa2.01□□□□□ -2.09
RNU6-541P-201ENST00000384709 OR52N5Q8NH56 324 aa2.01□□□□□ -2.09
RNU6-541P-201ENST00000384709 ATL1Q8WXF7 558 aa2.01□□□□□ -2.09
RNU6-541P-201ENST00000384709 TMCO6Q96DC7 493 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms