RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 EPHA2P29317 976 aa13.59□□□□□ -0.23
SDC1-202ENST00000381150 CCND3P30281 292 aaPredicted RBP13.59□□□□□ -0.23
SDC1-202ENST00000381150 EEFSECP57772 596 aaKnown RBP13.59□□□□□ -0.23
SDC1-202ENST00000381150 LCP2Q13094 533 aa13.59□□□□□ -0.23
SDC1-202ENST00000381150 GALNT3Q14435 633 aa13.59□□□□□ -0.23
SDC1-202ENST00000381150 SMU1Q2TAY7 513 aa13.59□□□□□ -0.23
SDC1-202ENST00000381150 ZCCHC8Q6NZY4 707 aaKnown RBP13.59□□□□□ -0.23
SDC1-202ENST00000381150 ZNF280BQ86YH2 543 aa13.59□□□□□ -0.23
SDC1-202ENST00000381150 ELMOD1Q8N336 334 aa13.59□□□□□ -0.23
SDC1-202ENST00000381150 METTL4Q8N3J2 472 aa13.59□□□□□ -0.23
SDC1-202ENST00000381150 CADM2Q8N3J6 435 aa13.59□□□□□ -0.23
SDC1-202ENST00000381150 OR13C4Q8NGS5 318 aa13.59□□□□□ -0.23
SDC1-202ENST00000381150 BPIFB1Q8TDL5 484 aa13.59□□□□□ -0.23
SDC1-202ENST00000381150 MRGPRX2Q96LB1 330 aa13.59□□□□□ -0.23
SDC1-202ENST00000381150 Q96MT0 163 aa13.59□□□□□ -0.23
SDC1-202ENST00000381150 CYP2S1Q96SQ9 504 aa13.59□□□□□ -0.23
SDC1-202ENST00000381150 USE1Q9NZ43 259 aa13.59□□□□□ -0.23
SDC1-202ENST00000381150 VAPAQ9P0L0 249 aa13.59□□□□□ -0.23
SDC1-202ENST00000381150 DNAJB9Q9UBS3 223 aa13.59□□□□□ -0.23
SDC1-202ENST00000381150 DOCK4Q8N1I0 1966 aa13.58□□□□□ -0.23
SDC1-202ENST00000381150 GABARAPO95166 117 aa13.58□□□□□ -0.24
SDC1-202ENST00000381150 GLP2RO95838 553 aa13.58□□□□□ -0.24
SDC1-202ENST00000381150 OR4Q2P0C623 313 aa13.58□□□□□ -0.24
SDC1-202ENST00000381150 DNAJB2P25686 324 aa13.58□□□□□ -0.24
SDC1-202ENST00000381150 DEFA1P59665 94 aa13.58□□□□□ -0.24
SDC1-202ENST00000381150 DEFA3P59666 94 aa13.58□□□□□ -0.24
SDC1-202ENST00000381150 ISL1P61371 349 aa13.58□□□□□ -0.24
SDC1-202ENST00000381150 RPL38P63173 70 aaKnown RBP13.58□□□□□ -0.24
SDC1-202ENST00000381150 RCAN2Q14206 197 aa13.58□□□□□ -0.24
SDC1-202ENST00000381150 KIAA0930Q6ICG6 404 aaPredicted RBP13.58□□□□□ -0.24
SDC1-202ENST00000381150 NEK10Q6ZWH5 1172 aa13.58□□□□□ -0.24
SDC1-202ENST00000381150 OR52B6Q8NGF0 335 aa13.58□□□□□ -0.24
SDC1-202ENST00000381150 CNDP2Q96KP4 475 aaKnown RBP13.58□□□□□ -0.24
SDC1-202ENST00000381150 TRIM62Q9BVG3 475 aa13.58□□□□□ -0.24
SDC1-202ENST00000381150 EIF3LQ9Y262 564 aaKnown RBP13.58□□□□□ -0.24
SDC1-202ENST00000381150 BTBD3Q9Y2F9 522 aa13.58□□□□□ -0.24
SDC1-202ENST00000381150 PLXNA3P51805 1871 aa13.58□□□□□ -0.24
SDC1-202ENST00000381150 PSMD3O43242 534 aa13.58□□□□□ -0.24
SDC1-202ENST00000381150 CA12O43570 354 aa13.58□□□□□ -0.24
SDC1-202ENST00000381150 TSC22D2O75157 780 aa13.58□□□□□ -0.24
SDC1-202ENST00000381150 MED26O95402 600 aa13.58□□□□□ -0.24
SDC1-202ENST00000381150 HTR7P34969 479 aa13.58□□□□□ -0.24
SDC1-202ENST00000381150 TM4SF4P48230 202 aa13.58□□□□□ -0.24
SDC1-202ENST00000381150 ARHGDIAP52565 204 aa13.58□□□□□ -0.24
SDC1-202ENST00000381150 SPANXN2Q5MJ10 180 aa13.58□□□□□ -0.24
SDC1-202ENST00000381150 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.58□□□□□ -0.24
SDC1-202ENST00000381150 SYVN1Q86TM6 617 aa13.58□□□□□ -0.24
SDC1-202ENST00000381150 CNTN4Q8IWV2 1026 aa13.58□□□□□ -0.24
SDC1-202ENST00000381150 ADHFE1Q8IWW8 467 aa13.58□□□□□ -0.24
SDC1-202ENST00000381150 THEM5Q8N1Q8 247 aa13.58□□□□□ -0.24
SDC1-202ENST00000381150 ATP6V0D2Q8N8Y2 350 aa13.58□□□□□ -0.24
SDC1-202ENST00000381150 OR2T11Q8NH01 316 aa13.58□□□□□ -0.24
SDC1-202ENST00000381150 CENPOQ9BU64 300 aa13.58□□□□□ -0.24
SDC1-202ENST00000381150 RPRD1BQ9NQG5 326 aaKnown RBP13.58□□□□□ -0.24
SDC1-202ENST00000381150 PRELID1Q9Y255 219 aa13.58□□□□□ -0.24
SDC1-202ENST00000381150 PCDHGA10Q9Y5H3 936 aa13.58□□□□□ -0.24
SDC1-202ENST00000381150 NUP214P35658 2090 aaPredicted RBP13.58□□□□□ -0.24
SDC1-202ENST00000381150 A0A096LPI6 279 aa13.58□□□□□ -0.24
SDC1-202ENST00000381150 PEX11BO96011 259 aa13.58□□□□□ -0.24
SDC1-202ENST00000381150 CD1DP15813 335 aa13.58□□□□□ -0.24
SDC1-202ENST00000381150 CST5P28325 142 aaPredicted RBP13.58□□□□□ -0.24
SDC1-202ENST00000381150 C21orf33P30042 268 aaPredicted RBP13.58□□□□□ -0.24
SDC1-202ENST00000381150 EIF2DP41214 584 aaKnown RBP13.58□□□□□ -0.24
SDC1-202ENST00000381150 IDH2P48735 452 aaKnown RBP13.58□□□□□ -0.24
SDC1-202ENST00000381150 ATP4BP51164 291 aa13.58□□□□□ -0.24
SDC1-202ENST00000381150 DSC1Q08554 894 aa13.58□□□□□ -0.24
SDC1-202ENST00000381150 FAM174BQ3ZCQ3 159 aa13.58□□□□□ -0.24
SDC1-202ENST00000381150 B3GNT8Q7Z7M8 397 aa13.58□□□□□ -0.24
SDC1-202ENST00000381150 ZNF683Q8IZ20 524 aa13.58□□□□□ -0.24
SDC1-202ENST00000381150 DYNC2LI1Q8TCX1 351 aa13.58□□□□□ -0.24
SDC1-202ENST00000381150 PYCR2Q96C36 320 aa13.58□□□□□ -0.24
SDC1-202ENST00000381150 MOV10Q9HCE1 1003 aaKnown RBP13.58□□□□□ -0.24
SDC1-202ENST00000381150 UXTQ9UBK9 157 aaPredicted RBP13.58□□□□□ -0.24
SDC1-202ENST00000381150 PCDHB8Q9UN66 801 aa13.58□□□□□ -0.24
SDC1-202ENST00000381150 WBP11Q9Y2W2 641 aaKnown RBP13.58□□□□□ -0.24
SDC1-202ENST00000381150 HS3ST4Q9Y661 456 aa13.58□□□□□ -0.24
SDC1-202ENST00000381150 LOC110117498-PIK3R3F6TDL0 507 aa13.57□□□□□ -0.24
SDC1-202ENST00000381150 MEN1O00255 615 aa13.57□□□□□ -0.24
SDC1-202ENST00000381150 FGF10O15520 208 aaPredicted RBP13.57□□□□□ -0.24
SDC1-202ENST00000381150 HTR1EP28566 365 aa13.57□□□□□ -0.24
SDC1-202ENST00000381150 GRIK1P39086 918 aa13.57□□□□□ -0.24
SDC1-202ENST00000381150 DCTP40126 519 aa13.57□□□□□ -0.24
SDC1-202ENST00000381150 MASP1P48740 699 aa13.57□□□□□ -0.24
SDC1-202ENST00000381150 HTR6P50406 440 aa13.57□□□□□ -0.24
SDC1-202ENST00000381150 MLLT6P55198 1093 aaPredicted RBP13.57□□□□□ -0.24
SDC1-202ENST00000381150 MAPKAPK3Q16644 382 aa13.57□□□□□ -0.24
SDC1-202ENST00000381150 ARMC4Q5T2S8 1044 aa13.57□□□□□ -0.24
SDC1-202ENST00000381150 RANBP10Q6VN20 620 aa13.57□□□□□ -0.24
SDC1-202ENST00000381150 Q6ZPB1 254 aaPredicted RBP13.57□□□□□ -0.24
SDC1-202ENST00000381150 CCDC117Q8IWD4 279 aaPredicted RBP13.57□□□□□ -0.24
SDC1-202ENST00000381150 VMP1Q96GC9 406 aa13.57□□□□□ -0.24
SDC1-202ENST00000381150 UBXN10Q96LJ8 280 aa13.57□□□□□ -0.24
SDC1-202ENST00000381150 CPNE5Q9HCH3 593 aa13.57□□□□□ -0.24
SDC1-202ENST00000381150 FBXO10Q9UK96 956 aa13.57□□□□□ -0.24
SDC1-202ENST00000381150 DNMT3AQ9Y6K1 912 aaPredicted RBP13.57□□□□□ -0.24
SDC1-202ENST00000381150 FAM92AA1XBS5 289 aa13.57□□□□□ -0.24
SDC1-202ENST00000381150 HOXC11O43248 304 aaPredicted RBP13.57□□□□□ -0.24
SDC1-202ENST00000381150 TULP3O75386 442 aa13.57□□□□□ -0.24
SDC1-202ENST00000381150 OAZ2O95190 189 aa13.57□□□□□ -0.24
SDC1-202ENST00000381150 GADD45AP24522 165 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms