RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 ADRB3P13945 408 aa6.42□□□□□ -1.38
NEDD9-202ENST00000379446 JAK1P23458 1154 aa6.42□□□□□ -1.38
NEDD9-202ENST00000379446 TRPC1P48995 793 aa6.42□□□□□ -1.38
NEDD9-202ENST00000379446 VSX2P58304 361 aaPredicted RBP6.42□□□□□ -1.38
NEDD9-202ENST00000379446 GPX6P59796 221 aa6.42□□□□□ -1.38
NEDD9-202ENST00000379446 SELENOVP59797 346 aa6.42□□□□□ -1.38
NEDD9-202ENST00000379446 SRP54P61011 504 aaKnown RBP6.42□□□□□ -1.38
NEDD9-202ENST00000379446 RIN1Q13671 783 aa6.42□□□□□ -1.38
NEDD9-202ENST00000379446 CCDC142Q17RM4 750 aa6.42□□□□□ -1.38
NEDD9-202ENST00000379446 HES3Q5TGS1 186 aa6.42□□□□□ -1.38
NEDD9-202ENST00000379446 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.42□□□□□ -1.38
NEDD9-202ENST00000379446 DLG3Q92796 817 aa6.42□□□□□ -1.38
NEDD9-202ENST00000379446 FER1L6-AS2Q96M78 137 aa6.42□□□□□ -1.38
NEDD9-202ENST00000379446 LENG8Q96PV6 779 aaPredicted RBP6.42□□□□□ -1.38
NEDD9-202ENST00000379446 XKR8Q9H6D3 395 aa6.42□□□□□ -1.38
NEDD9-202ENST00000379446 C6orf106Q9H6K1 298 aaPredicted RBP6.42□□□□□ -1.38
NEDD9-202ENST00000379446 NOL6Q9H6R4 1146 aaKnown RBP6.42□□□□□ -1.38
NEDD9-202ENST00000379446 PARVBQ9HBI1 364 aa6.42□□□□□ -1.38
NEDD9-202ENST00000379446 PCDH12Q9NPG4 1184 aa6.42□□□□□ -1.38
NEDD9-202ENST00000379446 CCDC177Q9NQR7 707 aaPredicted RBP6.42□□□□□ -1.38
NEDD9-202ENST00000379446 GDAP2Q9NXN4 497 aa6.42□□□□□ -1.38
NEDD9-202ENST00000379446 HMGXB4Q9UGU5 601 aa6.42□□□□□ -1.38
NEDD9-202ENST00000379446 POLHQ9Y253 713 aa6.42□□□□□ -1.38
NEDD9-202ENST00000379446 LRRC42Q9Y546 428 aa6.42□□□□□ -1.38
NEDD9-202ENST00000379446 SCN9AQ15858 1988 aa6.42□□□□□ -1.38
NEDD9-202ENST00000379446 AKAP6Q13023 2319 aa6.42□□□□□ -1.38
NEDD9-202ENST00000379446 E7EQ34 232 aa6.42□□□□□ -1.38
NEDD9-202ENST00000379446 ERBB2P04626 1255 aa6.42□□□□□ -1.38
NEDD9-202ENST00000379446 ITGA2BP08514 1039 aa6.42□□□□□ -1.38
NEDD9-202ENST00000379446 C6P13671 934 aa6.42□□□□□ -1.38
NEDD9-202ENST00000379446 ACSL1P33121 698 aa6.42□□□□□ -1.38
NEDD9-202ENST00000379446 NR2C2P49116 596 aa6.42□□□□□ -1.38
NEDD9-202ENST00000379446 EIF2B2P49770 351 aaKnown RBP6.42□□□□□ -1.38
NEDD9-202ENST00000379446 PDX1P52945 283 aa6.42□□□□□ -1.38
NEDD9-202ENST00000379446 SH3BGRP55822 239 aaPredicted RBP6.42□□□□□ -1.38
NEDD9-202ENST00000379446 NAA20P61599 178 aa6.42□□□□□ -1.38
NEDD9-202ENST00000379446 SLC25A3Q00325 362 aa6.42□□□□□ -1.38
NEDD9-202ENST00000379446 GAREM2Q75VX8 874 aa6.42□□□□□ -1.38
NEDD9-202ENST00000379446 SLC26A9Q7LBE3 791 aa6.42□□□□□ -1.38
NEDD9-202ENST00000379446 STRA8Q7Z7C7 330 aa6.42□□□□□ -1.38
NEDD9-202ENST00000379446 GSTCDQ8NEC7 633 aa6.42□□□□□ -1.38
NEDD9-202ENST00000379446 UTP4Q969X6 686 aaKnown RBP6.42□□□□□ -1.38
NEDD9-202ENST00000379446 APOPT1Q96IL0 206 aa6.42□□□□□ -1.38
NEDD9-202ENST00000379446 GUCD1Q96NT3 240 aa6.42□□□□□ -1.38
NEDD9-202ENST00000379446 CSPG4P5Q96PW8 444 aa6.42□□□□□ -1.38
NEDD9-202ENST00000379446 CCT7Q99832 543 aa6.42□□□□□ -1.38
NEDD9-202ENST00000379446 NTPCRQ9BSD7 190 aaKnown RBP6.42□□□□□ -1.38
NEDD9-202ENST00000379446 FRMD8P1Q9BZ68 369 aaPredicted RBP6.42□□□□□ -1.38
NEDD9-202ENST00000379446 WWP1Q9H0M0 922 aa6.42□□□□□ -1.38
NEDD9-202ENST00000379446 LRMDAQ9H2I8 198 aa6.42□□□□□ -1.38
NEDD9-202ENST00000379446 ACSS3Q9H6R3 686 aa6.42□□□□□ -1.38
NEDD9-202ENST00000379446 ZNF395Q9H8N7 513 aaPredicted RBP6.42□□□□□ -1.38
NEDD9-202ENST00000379446 ANKMY1Q9P2S6 941 aa6.42□□□□□ -1.38
NEDD9-202ENST00000379446 C15orf38-AP3S2A0A0A6YYH1 394 aa6.42□□□□□ -1.38
NEDD9-202ENST00000379446 PATE3B3GLJ2 98 aa6.42□□□□□ -1.38
NEDD9-202ENST00000379446 PIRO00625 290 aa6.42□□□□□ -1.38
NEDD9-202ENST00000379446 WDR47O94967 919 aa6.42□□□□□ -1.38
NEDD9-202ENST00000379446 IGHEP01854 428 aa6.42□□□□□ -1.38
NEDD9-202ENST00000379446 HIST1H2ABP04908 130 aa6.42□□□□□ -1.38
NEDD9-202ENST00000379446 TFPTP0C1Z6 253 aa6.42□□□□□ -1.38
NEDD9-202ENST00000379446 TSHRP16473 764 aa6.42□□□□□ -1.38
NEDD9-202ENST00000379446 FBLP22087 321 aaKnown RBP6.42□□□□□ -1.38
NEDD9-202ENST00000379446 IL10RBQ08334 325 aa6.42□□□□□ -1.38
NEDD9-202ENST00000379446 NR6A1Q15406 480 aa6.42□□□□□ -1.38
NEDD9-202ENST00000379446 OASLQ15646 514 aaKnown RBP6.42□□□□□ -1.38
NEDD9-202ENST00000379446 RSPO2Q6UXX9 243 aaPredicted RBP6.42□□□□□ -1.38
NEDD9-202ENST00000379446 RIPOR1Q6ZS17 1223 aa6.42□□□□□ -1.38
NEDD9-202ENST00000379446 BBS12Q6ZW61 710 aa6.42□□□□□ -1.38
NEDD9-202ENST00000379446 HIST3H2AQ7L7L0 130 aa6.42□□□□□ -1.38
NEDD9-202ENST00000379446 SLC29A4Q7RTT9 530 aa6.42□□□□□ -1.38
NEDD9-202ENST00000379446 WDR53Q7Z5U6 358 aaPredicted RBP6.42□□□□□ -1.38
NEDD9-202ENST00000379446 SLC26A11Q86WA9 606 aa6.42□□□□□ -1.38
NEDD9-202ENST00000379446 MDGA1Q8NFP4 955 aa6.42□□□□□ -1.38
NEDD9-202ENST00000379446 C10orf82Q8WW14 230 aa6.42□□□□□ -1.38
NEDD9-202ENST00000379446 HIST1H2ACQ93077 130 aa6.42□□□□□ -1.38
NEDD9-202ENST00000379446 PHF21BQ96EK2 531 aa6.42□□□□□ -1.38
NEDD9-202ENST00000379446 OXNAD1Q96HP4 312 aaPredicted RBP6.42□□□□□ -1.38
NEDD9-202ENST00000379446 LPAR4Q99677 370 aa6.42□□□□□ -1.38
NEDD9-202ENST00000379446 ZSCAN5AQ9BUG6 496 aa6.42□□□□□ -1.38
NEDD9-202ENST00000379446 HAPLN2Q9GZV7 340 aa6.42□□□□□ -1.38
NEDD9-202ENST00000379446 FSCN3Q9NQT6 498 aa6.42□□□□□ -1.38
NEDD9-202ENST00000379446 PTGFRNQ9P2B2 879 aa6.42□□□□□ -1.38
NEDD9-202ENST00000379446 BLOC1S6Q9UL45 172 aa6.42□□□□□ -1.38
NEDD9-202ENST00000379446 PCDHGB3Q9Y5G1 929 aa6.42□□□□□ -1.38
NEDD9-202ENST00000379446 C2orf74A8MZ97 194 aa6.41□□□□□ -1.38
NEDD9-202ENST00000379446 APOC4-APOC2K7ER74 178 aa6.41□□□□□ -1.38
NEDD9-202ENST00000379446 CCL22O00626 93 aa6.41□□□□□ -1.38
NEDD9-202ENST00000379446 PMM2O15305 246 aa6.41□□□□□ -1.38
NEDD9-202ENST00000379446 GSC2O15499 205 aa6.41□□□□□ -1.38
NEDD9-202ENST00000379446 PAPSS1O43252 624 aaPredicted RBP6.41□□□□□ -1.38
NEDD9-202ENST00000379446 APOC2P02655 101 aa6.41□□□□□ -1.38
NEDD9-202ENST00000379446 ERCC1P07992 297 aaPredicted RBP6.41□□□□□ -1.38
NEDD9-202ENST00000379446 ANPEPP15144 967 aa6.41□□□□□ -1.38
NEDD9-202ENST00000379446 L1CAMP32004 1257 aa6.41□□□□□ -1.38
NEDD9-202ENST00000379446 GDI2P50395 445 aaKnown RBP6.41□□□□□ -1.38
NEDD9-202ENST00000379446 BLVRAP53004 296 aa6.41□□□□□ -1.38
NEDD9-202ENST00000379446 CDK16Q00536 496 aa6.41□□□□□ -1.38
NEDD9-202ENST00000379446 TBL3Q12788 808 aaKnown RBP6.41□□□□□ -1.38
NEDD9-202ENST00000379446 TCEAL1Q15170 157 aa6.41□□□□□ -1.38
NEDD9-202ENST00000379446 TAF13Q15543 124 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms