RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 TIPARPQ7Z3E1 657 aaKnown RBP13.43□□□□□ -0.26
PRPF18-202ENST00000378572 OR13J1Q8NGT2 312 aa13.43□□□□□ -0.26
PRPF18-202ENST00000378572 EPS8L3Q8TE67 593 aaKnown RBP13.43□□□□□ -0.26
PRPF18-202ENST00000378572 EID2BQ96D98 161 aa13.43□□□□□ -0.26
PRPF18-202ENST00000378572 PAFAH2Q99487 392 aa13.43□□□□□ -0.26
PRPF18-202ENST00000378572 TIMM29Q9BSF4 260 aa13.43□□□□□ -0.26
PRPF18-202ENST00000378572 SMYD2Q9NRG4 433 aa13.43□□□□□ -0.26
PRPF18-202ENST00000378572 NSMCE4AQ9NXX6 385 aa13.43□□□□□ -0.26
PRPF18-202ENST00000378572 PSMC3IPQ9P2W1 217 aaPredicted RBP13.43□□□□□ -0.26
PRPF18-202ENST00000378572 SLC23A2Q9UGH3 650 aa13.43□□□□□ -0.26
PRPF18-202ENST00000378572 LNPEPQ9UIQ6 1025 aa13.43□□□□□ -0.26
PRPF18-202ENST00000378572 ZNF180Q9UJW8 692 aa13.43□□□□□ -0.26
PRPF18-202ENST00000378572 OR52A4PA6NMU1 304 aa13.42□□□□□ -0.26
PRPF18-202ENST00000378572 GOLGA8KD6RF30 607 aa13.42□□□□□ -0.26
PRPF18-202ENST00000378572 POC1B-GALNT4F8VUJ3 575 aa13.42□□□□□ -0.26
PRPF18-202ENST00000378572 KATNA1O75449 491 aa13.42□□□□□ -0.26
PRPF18-202ENST00000378572 BPIP17213 487 aa13.42□□□□□ -0.26
PRPF18-202ENST00000378572 IDSP22304 550 aa13.42□□□□□ -0.26
PRPF18-202ENST00000378572 OAS2P29728 719 aaKnown RBP13.42□□□□□ -0.26
PRPF18-202ENST00000378572 HMGCLP35914 325 aa13.42□□□□□ -0.26
PRPF18-202ENST00000378572 DLSTP36957 453 aa13.42□□□□□ -0.26
PRPF18-202ENST00000378572 HALP42357 657 aa13.42□□□□□ -0.26
PRPF18-202ENST00000378572 MSH2P43246 934 aa13.42□□□□□ -0.26
PRPF18-202ENST00000378572 TNFAIP8L3Q5GJ75 292 aa13.42□□□□□ -0.26
PRPF18-202ENST00000378572 FAM92BQ6ZTR7 304 aa13.42□□□□□ -0.26
PRPF18-202ENST00000378572 KCNMB4Q86W47 210 aa13.42□□□□□ -0.26
PRPF18-202ENST00000378572 CNTN4Q8IWV2 1026 aa13.42□□□□□ -0.26
PRPF18-202ENST00000378572 LMNTD2Q8IXW0 634 aa13.42□□□□□ -0.26
PRPF18-202ENST00000378572 GABPB2Q8TAK5 448 aaPredicted RBP13.42□□□□□ -0.26
PRPF18-202ENST00000378572 OR6C1Q96RD1 312 aa13.42□□□□□ -0.26
PRPF18-202ENST00000378572 POT1Q9NUX5 634 aa13.42□□□□□ -0.26
PRPF18-202ENST00000378572 NLE1Q9NVX2 485 aaPredicted RBP13.42□□□□□ -0.26
PRPF18-202ENST00000378572 TUBD1Q9UJT1 453 aa13.42□□□□□ -0.26
PRPF18-202ENST00000378572 TMEM184BQ9Y519 407 aaPredicted RBP13.42□□□□□ -0.26
PRPF18-202ENST00000378572 PCDHB3Q9Y5E6 796 aa13.42□□□□□ -0.26
PRPF18-202ENST00000378572 MRPS18BQ9Y676 258 aaKnown RBP13.42□□□□□ -0.26
PRPF18-202ENST00000378572 ARL5AQ9Y689 179 aa13.42□□□□□ -0.26
PRPF18-202ENST00000378572 H7C0S8 307 aa13.42□□□□□ -0.26
PRPF18-202ENST00000378572 VEGFDO43915 354 aa13.42□□□□□ -0.26
PRPF18-202ENST00000378572 ANKRD34CP0C6C1 535 aa13.42□□□□□ -0.26
PRPF18-202ENST00000378572 XRCC1P18887 633 aaPredicted RBP13.42□□□□□ -0.26
PRPF18-202ENST00000378572 ARNTP27540 789 aa13.42□□□□□ -0.26
PRPF18-202ENST00000378572 SLC19A1P41440 591 aa13.42□□□□□ -0.26
PRPF18-202ENST00000378572 STAT5AP42229 794 aa13.42□□□□□ -0.26
PRPF18-202ENST00000378572 LEPRP48357 1165 aaKnown RBP13.42□□□□□ -0.26
PRPF18-202ENST00000378572 CLCNKAP51800 687 aa13.42□□□□□ -0.26
PRPF18-202ENST00000378572 SH3BP2P78314 561 aa13.42□□□□□ -0.26
PRPF18-202ENST00000378572 EFTUD2Q15029 972 aaKnown RBP eCLIP13.42□□□□□ -0.26
PRPF18-202ENST00000378572 PLCL1Q15111 1095 aa13.42□□□□□ -0.26
PRPF18-202ENST00000378572 CACHD1Q5VU97 1274 aa13.42□□□□□ -0.26
PRPF18-202ENST00000378572 C6orf15Q6UXA7 325 aaPredicted RBP13.42□□□□□ -0.26
PRPF18-202ENST00000378572 SLC26A11Q86WA9 606 aa13.42□□□□□ -0.26
PRPF18-202ENST00000378572 PPM1NQ8N819 430 aa13.42□□□□□ -0.26
PRPF18-202ENST00000378572 GALNT6Q8NCL4 622 aa13.42□□□□□ -0.26
PRPF18-202ENST00000378572 CALML6Q8TD86 181 aa13.42□□□□□ -0.26
PRPF18-202ENST00000378572 APOBEC4Q8WW27 367 aaKnown RBP13.42□□□□□ -0.26
PRPF18-202ENST00000378572 RSC1A1Q92681 617 aa13.42□□□□□ -0.26
PRPF18-202ENST00000378572 SGSM3Q96HU1 749 aa13.42□□□□□ -0.26
PRPF18-202ENST00000378572 ZCCHC2Q9C0B9 1178 aaKnown RBP13.42□□□□□ -0.26
PRPF18-202ENST00000378572 STMN4Q9H169 189 aaPredicted RBP13.42□□□□□ -0.26
PRPF18-202ENST00000378572 EPN3Q9H201 632 aa13.42□□□□□ -0.26
PRPF18-202ENST00000378572 UCK1Q9HA47 277 aa13.42□□□□□ -0.26
PRPF18-202ENST00000378572 C20orf96Q9NUD7 363 aaPredicted RBP13.42□□□□□ -0.26
PRPF18-202ENST00000378572 OGFRQ9NZT2 677 aa13.42□□□□□ -0.26
PRPF18-202ENST00000378572 IL17CQ9P0M4 197 aa13.42□□□□□ -0.26
PRPF18-202ENST00000378572 ZFATQ9P243 1243 aa13.42□□□□□ -0.26
PRPF18-202ENST00000378572 SLC2A6Q9UGQ3 507 aa13.42□□□□□ -0.26
PRPF18-202ENST00000378572 IKBKGQ9Y6K9 419 aa13.42□□□□□ -0.26
PRPF18-202ENST00000378572 SLC30A1Q9Y6M5 507 aa13.42□□□□□ -0.26
PRPF18-202ENST00000378572 TLDC2A0PJX2 215 aa13.41□□□□□ -0.26
PRPF18-202ENST00000378572 CXorf49A8MYA2 514 aaPredicted RBP13.41□□□□□ -0.26
PRPF18-202ENST00000378572 AURKAO14965 403 aa13.41□□□□□ -0.26
PRPF18-202ENST00000378572 RGS16O15492 202 aaPredicted RBP13.41□□□□□ -0.26
PRPF18-202ENST00000378572 KIAA0754O94854 1291 aa13.41□□□□□ -0.26
PRPF18-202ENST00000378572 VAPBO95292 243 aa13.41□□□□□ -0.26
PRPF18-202ENST00000378572 DLGAP3O95886 979 aa13.41□□□□□ -0.26
PRPF18-202ENST00000378572 INHBAP08476 426 aa13.41□□□□□ -0.26
PRPF18-202ENST00000378572 ERVK-10P10266 1014 aa13.41□□□□□ -0.26
PRPF18-202ENST00000378572 PBLDP30039 288 aaPredicted RBP13.41□□□□□ -0.26
PRPF18-202ENST00000378572 ATP5DP30049 168 aa13.41□□□□□ -0.26
PRPF18-202ENST00000378572 HADHAP40939 763 aa13.41□□□□□ -0.26
PRPF18-202ENST00000378572 SLCO1A2P46721 670 aa13.41□□□□□ -0.26
PRPF18-202ENST00000378572 CAPZBP47756 277 aa13.41□□□□□ -0.26
PRPF18-202ENST00000378572 SERPINB9P50453 376 aa13.41□□□□□ -0.26
PRPF18-202ENST00000378572 GPR18Q14330 331 aa13.41□□□□□ -0.26
PRPF18-202ENST00000378572 TEDDM1Q5T9Z0 273 aa13.41□□□□□ -0.26
PRPF18-202ENST00000378572 GALNT7Q86SF2 657 aa13.41□□□□□ -0.26
PRPF18-202ENST00000378572 CTAGE3PQ8IX95 158 aa13.41□□□□□ -0.26
PRPF18-202ENST00000378572 DCAKDQ8WVC6 231 aa13.41□□□□□ -0.26
PRPF18-202ENST00000378572 ZDHHC12Q96GR4 267 aa13.41□□□□□ -0.26
PRPF18-202ENST00000378572 DNAJC1Q96KC8 554 aaKnown RBP13.41□□□□□ -0.26
PRPF18-202ENST00000378572 ATP6V1G3Q96LB4 118 aa13.41□□□□□ -0.26
PRPF18-202ENST00000378572 CPNE1Q99829 537 aa13.41□□□□□ -0.26
PRPF18-202ENST00000378572 FAM167BQ9BTA0 163 aa13.41□□□□□ -0.26
PRPF18-202ENST00000378572 PPANQ9NQ55 473 aaKnown RBP13.41□□□□□ -0.26
PRPF18-202ENST00000378572 SIDT1Q9NXL6 827 aaKnown RBP13.41□□□□□ -0.26
PRPF18-202ENST00000378572 ZNF624Q9P2J8 865 aaPredicted RBP13.41□□□□□ -0.26
PRPF18-202ENST00000378572 NFKBIL1Q9UBC1 381 aaPredicted RBP13.41□□□□□ -0.26
PRPF18-202ENST00000378572 CROTQ9UKG9 612 aa13.41□□□□□ -0.26
PRPF18-202ENST00000378572 HMGB1P1B2RPK0 211 aaPredicted RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms