RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 MAP7Q14244 749 aa7.93□□□□□ -1.14
CKAP2-203ENST00000378037 TRMT5Q32P41 509 aaKnown RBP7.93□□□□□ -1.14
CKAP2-203ENST00000378037 BNIPLQ7Z465 357 aa7.93□□□□□ -1.14
CKAP2-203ENST00000378037 SNX20Q7Z614 316 aa7.93□□□□□ -1.14
CKAP2-203ENST00000378037 DHDDSQ86SQ9 333 aa7.93□□□□□ -1.14
CKAP2-203ENST00000378037 UTP15Q8TED0 518 aaKnown RBP7.93□□□□□ -1.14
CKAP2-203ENST00000378037 ASZ1Q8WWH4 475 aa7.93□□□□□ -1.14
CKAP2-203ENST00000378037 EID2BQ96D98 161 aa7.93□□□□□ -1.14
CKAP2-203ENST00000378037 MYRFLQ96LU7 910 aa7.93□□□□□ -1.14
CKAP2-203ENST00000378037 PPP1R2P1Q96PQ5 205 aa7.93□□□□□ -1.14
CKAP2-203ENST00000378037 MCMBPQ9BTE3 642 aa7.93□□□□□ -1.14
CKAP2-203ENST00000378037 SLC25A23Q9BV35 468 aa7.93□□□□□ -1.14
CKAP2-203ENST00000378037 TMEM121BQ9BXQ6 578 aaPredicted RBP7.93□□□□□ -1.14
CKAP2-203ENST00000378037 ZBTB26Q9HCK0 441 aa7.93□□□□□ -1.14
CKAP2-203ENST00000378037 SPATS2LQ9NUQ6 558 aaKnown RBP7.93□□□□□ -1.14
CKAP2-203ENST00000378037 PRKAG3Q9UGI9 489 aa7.93□□□□□ -1.14
CKAP2-203ENST00000378037 FBXW2Q9UKT8 454 aa7.93□□□□□ -1.14
CKAP2-203ENST00000378037 DYRK1BQ9Y463 629 aa7.93□□□□□ -1.14
CKAP2-203ENST00000378037 PLEKHM1Q9Y4G2 1056 aa7.93□□□□□ -1.14
CKAP2-203ENST00000378037 MAGED1Q9Y5V3 778 aaPredicted RBP7.93□□□□□ -1.14
CKAP2-203ENST00000378037 PCM1Q15154 2024 aa7.93□□□□□ -1.14
CKAP2-203ENST00000378037 MDC1Q14676 2089 aaKnown RBP7.93□□□□□ -1.14
CKAP2-203ENST00000378037 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.93□□□□□ -1.14
CKAP2-203ENST00000378037 LINC00854A0A1B0GVQ3 168 aa7.93□□□□□ -1.14
CKAP2-203ENST00000378037 HS6ST1O60243 411 aa7.93□□□□□ -1.14
CKAP2-203ENST00000378037 TM7SF2O76062 418 aa7.93□□□□□ -1.14
CKAP2-203ENST00000378037 SLC35G4P0C7Q5 338 aa7.93□□□□□ -1.14
CKAP2-203ENST00000378037 CYP2A6P11509 494 aaPredicted RBP7.93□□□□□ -1.14
CKAP2-203ENST00000378037 ALOX15P16050 662 aaPredicted RBP7.93□□□□□ -1.14
CKAP2-203ENST00000378037 PSMA4P25789 261 aaKnown RBP7.93□□□□□ -1.14
CKAP2-203ENST00000378037 ERVPABLB-1P60509 514 aa7.93□□□□□ -1.14
CKAP2-203ENST00000378037 SATB1Q01826 763 aa7.93□□□□□ -1.14
CKAP2-203ENST00000378037 INPP5AQ14642 412 aa7.93□□□□□ -1.14
CKAP2-203ENST00000378037 MAPRE2Q15555 327 aa7.93□□□□□ -1.14
CKAP2-203ENST00000378037 TNFAIP8L2Q6P589 184 aaPredicted RBP7.93□□□□□ -1.14
CKAP2-203ENST00000378037 NCEH1Q6PIU2 408 aa7.93□□□□□ -1.14
CKAP2-203ENST00000378037 TPRG1Q6ZUI0 275 aa7.93□□□□□ -1.14
CKAP2-203ENST00000378037 OLIG3Q7RTU3 272 aa7.93□□□□□ -1.14
CKAP2-203ENST00000378037 TAGAPQ8N103 731 aa7.93□□□□□ -1.14
CKAP2-203ENST00000378037 PELI3Q8N2H9 469 aa7.93□□□□□ -1.14
CKAP2-203ENST00000378037 FAM160A2Q8N612 972 aaPredicted RBP7.93□□□□□ -1.14
CKAP2-203ENST00000378037 KDM1BQ8NB78 822 aa7.93□□□□□ -1.14
CKAP2-203ENST00000378037 OR4E2Q8NGC2 313 aa7.93□□□□□ -1.14
CKAP2-203ENST00000378037 GPR150Q8NGU9 434 aa7.93□□□□□ -1.14
CKAP2-203ENST00000378037 VANGL1Q8TAA9 524 aaPredicted RBP7.93□□□□□ -1.14
CKAP2-203ENST00000378037 KAT2AQ92830 837 aa7.93□□□□□ -1.14
CKAP2-203ENST00000378037 ITCHQ96J02 903 aa7.93□□□□□ -1.14
CKAP2-203ENST00000378037 TEX37Q96LM6 180 aa7.93□□□□□ -1.14
CKAP2-203ENST00000378037 NSMCE2Q96MF7 247 aa7.93□□□□□ -1.14
CKAP2-203ENST00000378037 MGME1Q9BQP7 344 aa7.93□□□□□ -1.14
CKAP2-203ENST00000378037 DHRS4Q9BTZ2 278 aa7.93□□□□□ -1.14
CKAP2-203ENST00000378037 IL21Q9HBE4 155 aa7.93□□□□□ -1.14
CKAP2-203ENST00000378037 RASSF1Q9NS23 344 aa7.93□□□□□ -1.14
CKAP2-203ENST00000378037 TREX1Q9NSU2 369 aa7.93□□□□□ -1.14
CKAP2-203ENST00000378037 GID8Q9NWU2 228 aa7.93□□□□□ -1.14
CKAP2-203ENST00000378037 CA14Q9ULX7 337 aa7.93□□□□□ -1.14
CKAP2-203ENST00000378037 PLXNA1Q9UIW2 1896 aa7.93□□□□□ -1.14
CKAP2-203ENST00000378037 SCN5AQ14524 2016 aa7.93□□□□□ -1.14
CKAP2-203ENST00000378037 PIEZO2Q9H5I5 2752 aa7.93□□□□□ -1.14
CKAP2-203ENST00000378037 EVPLLA8MZ36 301 aa7.93□□□□□ -1.14
CKAP2-203ENST00000378037 NFATC1O95644 943 aa7.93□□□□□ -1.14
CKAP2-203ENST00000378037 IMPDH1P20839 514 aa7.93□□□□□ -1.14
CKAP2-203ENST00000378037 HOXC8P31273 242 aa7.93□□□□□ -1.14
CKAP2-203ENST00000378037 NSG1P42857 185 aa7.93□□□□□ -1.14
CKAP2-203ENST00000378037 LEPRP48357 1165 aaKnown RBP7.93□□□□□ -1.14
CKAP2-203ENST00000378037 ERVK-21P61565 698 aa7.93□□□□□ -1.14
CKAP2-203ENST00000378037 DLX2Q07687 328 aaPredicted RBP7.93□□□□□ -1.14
CKAP2-203ENST00000378037 CEACAM7Q14002 265 aa7.93□□□□□ -1.14
CKAP2-203ENST00000378037 SIM2Q14190 667 aaPredicted RBP7.93□□□□□ -1.14
CKAP2-203ENST00000378037 FAM26DQ5JW98 314 aa7.93□□□□□ -1.14
CKAP2-203ENST00000378037 CATSPEREQ5SY80 951 aa7.93□□□□□ -1.14
CKAP2-203ENST00000378037 PARM1Q6UWI2 310 aa7.93□□□□□ -1.14
CKAP2-203ENST00000378037 CYP2U1Q7Z449 544 aa7.93□□□□□ -1.14
CKAP2-203ENST00000378037 WDR53Q7Z5U6 358 aaPredicted RBP7.93□□□□□ -1.14
CKAP2-203ENST00000378037 TMEM150AQ86TG1 271 aa7.93□□□□□ -1.14
CKAP2-203ENST00000378037 SMYD1Q8NB12 490 aa7.93□□□□□ -1.14
CKAP2-203ENST00000378037 CD200R1Q8TD46 325 aa7.93□□□□□ -1.14
CKAP2-203ENST00000378037 LRRC3BQ96PB8 259 aa7.93□□□□□ -1.14
CKAP2-203ENST00000378037 SPAG4Q9NPE6 437 aa7.93□□□□□ -1.14
CKAP2-203ENST00000378037 LHX3Q9UBR4 397 aa7.93□□□□□ -1.14
CKAP2-203ENST00000378037 AP4S1Q9Y587 144 aa7.93□□□□□ -1.14
CKAP2-203ENST00000378037 PCNX1Q96RV3 2341 aa7.93□□□□□ -1.14
CKAP2-203ENST00000378037 A8MU76 341 aa7.92□□□□□ -1.14
CKAP2-203ENST00000378037 H3BNC9 293 aa7.92□□□□□ -1.14
CKAP2-203ENST00000378037 RFXANKO14593 260 aa7.92□□□□□ -1.14
CKAP2-203ENST00000378037 OR1F1O43749 312 aa7.92□□□□□ -1.14
CKAP2-203ENST00000378037 ALDH1A2O94788 518 aa7.92□□□□□ -1.14
CKAP2-203ENST00000378037 OTCP00480 354 aa7.92□□□□□ -1.14
CKAP2-203ENST00000378037 ESR1P03372 595 aa7.92□□□□□ -1.14
CKAP2-203ENST00000378037 CCR7P32248 378 aa7.92□□□□□ -1.14
CKAP2-203ENST00000378037 HMGCLP35914 325 aa7.92□□□□□ -1.14
CKAP2-203ENST00000378037 MAGEA3P43357 314 aa7.92□□□□□ -1.14
CKAP2-203ENST00000378037 PRKAA2P54646 552 aa7.92□□□□□ -1.14
CKAP2-203ENST00000378037 LIPEQ05469 1076 aa7.92□□□□□ -1.14
CKAP2-203ENST00000378037 ZNF234Q14588 700 aa7.92□□□□□ -1.14
CKAP2-203ENST00000378037 AMZ1Q400G9 498 aa7.92□□□□□ -1.14
CKAP2-203ENST00000378037 STEAP4Q687X5 459 aa7.92□□□□□ -1.14
CKAP2-203ENST00000378037 EPGNQ6UW88 154 aa7.92□□□□□ -1.14
CKAP2-203ENST00000378037 KIAA0408Q6ZU52 694 aa7.92□□□□□ -1.14
CKAP2-203ENST00000378037 PARS2Q7L3T8 475 aaKnown RBP7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms