RNA–Protein interactions for RNA: ENST00000377153.5

UBE4B-203, Transcript of ubiquitination factor E4B, humanhuman

TSL 3 BASIC

Gene UBE4B, Length 1,273 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-203ENST00000377153 ARL4DP49703 201 aa14.09□□□□□ -0.15
UBE4B-203ENST00000377153 RAB28P51157 221 aa14.09□□□□□ -0.15
UBE4B-203ENST00000377153 GFERP55789 205 aa14.09□□□□□ -0.15
UBE4B-203ENST00000377153 ZFP36L1Q07352 338 aaKnown RBP14.09□□□□□ -0.15
UBE4B-203ENST00000377153 GBX1Q14549 363 aa14.09□□□□□ -0.15
UBE4B-203ENST00000377153 KLHL38Q2WGJ6 581 aa14.09□□□□□ -0.15
UBE4B-203ENST00000377153 ACSBG2Q5FVE4 666 aa14.09□□□□□ -0.15
UBE4B-203ENST00000377153 CYB5D1Q6P9G0 228 aa14.09□□□□□ -0.15
UBE4B-203ENST00000377153 UNQ6494/PRO21346Q6UXR6 183 aa14.09□□□□□ -0.15
UBE4B-203ENST00000377153 TMPRSS9Q7Z410 1059 aa14.09□□□□□ -0.15
UBE4B-203ENST00000377153 FBXO39Q8N4B4 442 aa14.09□□□□□ -0.15
UBE4B-203ENST00000377153 PPM1NQ8N819 430 aa14.09□□□□□ -0.15
UBE4B-203ENST00000377153 RCBTB1Q8NDN9 531 aa14.09□□□□□ -0.15
UBE4B-203ENST00000377153 GIMAP7Q8NHV1 300 aa14.09□□□□□ -0.15
UBE4B-203ENST00000377153 CYTH2Q99418 400 aa14.09□□□□□ -0.15
UBE4B-203ENST00000377153 RBBP8Q99708 897 aa14.09□□□□□ -0.15
UBE4B-203ENST00000377153 NINJ2Q9NZG7 142 aa14.09□□□□□ -0.15
UBE4B-203ENST00000377153 OR6C2Q9NZP2 312 aa14.09□□□□□ -0.15
UBE4B-203ENST00000377153 OGFRQ9NZT2 677 aa14.09□□□□□ -0.15
UBE4B-203ENST00000377153 TMEM9Q9P0T7 183 aa14.09□□□□□ -0.15
UBE4B-203ENST00000377153 EPHA6Q9UF33 1036 aa14.09□□□□□ -0.15
UBE4B-203ENST00000377153 ICKQ9UPZ9 632 aa14.09□□□□□ -0.15
UBE4B-203ENST00000377153 RUVBL2Q9Y230 463 aaKnown RBP14.09□□□□□ -0.15
UBE4B-203ENST00000377153 VWA7Q9Y334 891 aa14.09□□□□□ -0.15
UBE4B-203ENST00000377153 IKBKGQ9Y6K9 419 aa14.09□□□□□ -0.15
UBE4B-203ENST00000377153 KIF26BQ2KJY2 2108 aa14.08□□□□□ -0.16
UBE4B-203ENST00000377153 TMEM8BA6NDV4 472 aa14.08□□□□□ -0.16
UBE4B-203ENST00000377153 TRABD2BA6NFA1 517 aa14.08□□□□□ -0.16
UBE4B-203ENST00000377153 TLCD2A6NGC4 264 aa14.08□□□□□ -0.16
UBE4B-203ENST00000377153 A8MU76 341 aa14.08□□□□□ -0.16
UBE4B-203ENST00000377153 MATN4O95460 622 aa14.08□□□□□ -0.16
UBE4B-203ENST00000377153 SPRP35270 261 aaPredicted RBP14.08□□□□□ -0.16
UBE4B-203ENST00000377153 MLLT3P42568 568 aaPredicted RBP14.08□□□□□ -0.16
UBE4B-203ENST00000377153 BDKRB1P46663 353 aa14.08□□□□□ -0.16
UBE4B-203ENST00000377153 LSSP48449 732 aa14.08□□□□□ -0.16
UBE4B-203ENST00000377153 CDKN2DP55273 166 aa14.08□□□□□ -0.16
UBE4B-203ENST00000377153 IL2P60568 153 aa14.08□□□□□ -0.16
UBE4B-203ENST00000377153 SP140Q13342 867 aa14.08□□□□□ -0.16
UBE4B-203ENST00000377153 CAMK2BQ13554 666 aa14.08□□□□□ -0.16
UBE4B-203ENST00000377153 CACHD1Q5VU97 1274 aa14.08□□□□□ -0.16
UBE4B-203ENST00000377153 ZNF574Q6ZN55 896 aaPredicted RBP14.08□□□□□ -0.16
UBE4B-203ENST00000377153 FAM92BQ6ZTR7 304 aa14.08□□□□□ -0.16
UBE4B-203ENST00000377153 TAOK1Q7L7X3 1001 aa14.08□□□□□ -0.16
UBE4B-203ENST00000377153 PRSS42Q7Z5A4 293 aa14.08□□□□□ -0.16
UBE4B-203ENST00000377153 FAM129CQ86XR2 697 aa14.08□□□□□ -0.16
UBE4B-203ENST00000377153 CARFQ8N187 725 aa14.08□□□□□ -0.16
UBE4B-203ENST00000377153 EIF1ADQ8N9N8 165 aaKnown RBP14.08□□□□□ -0.16
UBE4B-203ENST00000377153 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.08□□□□□ -0.16
UBE4B-203ENST00000377153 UBXN4Q92575 508 aa14.08□□□□□ -0.16
UBE4B-203ENST00000377153 LINGO1Q96FE5 620 aa14.08□□□□□ -0.16
UBE4B-203ENST00000377153 CCDC86Q9H6F5 360 aaKnown RBP14.08□□□□□ -0.16
UBE4B-203ENST00000377153 ACSS3Q9H6R3 686 aa14.08□□□□□ -0.16
UBE4B-203ENST00000377153 POPDC3Q9HBV1 291 aa14.08□□□□□ -0.16
UBE4B-203ENST00000377153 SMYD2Q9NRG4 433 aa14.08□□□□□ -0.16
UBE4B-203ENST00000377153 GALPQ9UBC7 116 aa14.08□□□□□ -0.16
UBE4B-203ENST00000377153 PISDQ9UG56 409 aa14.08□□□□□ -0.16
UBE4B-203ENST00000377153 MED16Q9Y2X0 877 aa14.08□□□□□ -0.16
UBE4B-203ENST00000377153 PCDHGA8Q9Y5G5 932 aa14.08□□□□□ -0.16
UBE4B-203ENST00000377153 NFS1Q9Y697 457 aa14.08□□□□□ -0.16
UBE4B-203ENST00000377153 A0A087WUV0 522 aaPredicted RBP14.07□□□□□ -0.16
UBE4B-203ENST00000377153 PIPSLA2A3N6 862 aa14.07□□□□□ -0.16
UBE4B-203ENST00000377153 ZNF839A8K0R7 811 aa14.07□□□□□ -0.16
UBE4B-203ENST00000377153 AGRPO00253 132 aa14.07□□□□□ -0.16
UBE4B-203ENST00000377153 BTN3A1O00481 513 aa14.07□□□□□ -0.16
UBE4B-203ENST00000377153 RASGRF2O14827 1237 aa14.07□□□□□ -0.16
UBE4B-203ENST00000377153 ZBTB14O43829 449 aa14.07□□□□□ -0.16
UBE4B-203ENST00000377153 PIAS1O75925 651 aa14.07□□□□□ -0.16
UBE4B-203ENST00000377153 C1orf105O95561 183 aa14.07□□□□□ -0.16
UBE4B-203ENST00000377153 C8GP07360 202 aa14.07□□□□□ -0.16
UBE4B-203ENST00000377153 ITGA2BP08514 1039 aa14.07□□□□□ -0.16
UBE4B-203ENST00000377153 POLR2CP19387 275 aaPredicted RBP14.07□□□□□ -0.16
UBE4B-203ENST00000377153 CYP2A7P20853 494 aa14.07□□□□□ -0.16
UBE4B-203ENST00000377153 CDH3P22223 829 aa14.07□□□□□ -0.16
UBE4B-203ENST00000377153 POU4F1Q01851 419 aa14.07□□□□□ -0.16
UBE4B-203ENST00000377153 CFHR1Q03591 330 aa14.07□□□□□ -0.16
UBE4B-203ENST00000377153 C16orf72Q14CZ0 275 aa14.07□□□□□ -0.16
UBE4B-203ENST00000377153 RTP5Q14D33 572 aa14.07□□□□□ -0.16
UBE4B-203ENST00000377153 UAP1Q16222 522 aaPredicted RBP14.07□□□□□ -0.16
UBE4B-203ENST00000377153 GRTP1Q5TC63 336 aa14.07□□□□□ -0.16
UBE4B-203ENST00000377153 TMEM164Q5U3C3 297 aa14.07□□□□□ -0.16
UBE4B-203ENST00000377153 PAQR3Q6TCH7 311 aa14.07□□□□□ -0.16
UBE4B-203ENST00000377153 TRMT10CQ7L0Y3 403 aaKnown RBP14.07□□□□□ -0.16
UBE4B-203ENST00000377153 PIWIL4Q7Z3Z4 852 aaKnown RBP14.07□□□□□ -0.16
UBE4B-203ENST00000377153 GATA6Q92908 595 aa14.07□□□□□ -0.16
UBE4B-203ENST00000377153 SLC22A18Q96BI1 424 aa14.07□□□□□ -0.16
UBE4B-203ENST00000377153 SLC30A3Q99726 388 aa14.07□□□□□ -0.16
UBE4B-203ENST00000377153 ZNF768Q9H5H4 540 aaKnown RBP14.07□□□□□ -0.16
UBE4B-203ENST00000377153 XKR8Q9H6D3 395 aa14.07□□□□□ -0.16
UBE4B-203ENST00000377153 SYTL2Q9HCH5 934 aa14.07□□□□□ -0.16
UBE4B-203ENST00000377153 THSD1Q9NS62 852 aa14.07□□□□□ -0.16
UBE4B-203ENST00000377153 SPATA7Q9P0W8 599 aa14.07□□□□□ -0.16
UBE4B-203ENST00000377153 PDP2Q9P2J9 529 aa14.07□□□□□ -0.16
UBE4B-203ENST00000377153 LNPEPQ9UIQ6 1025 aa14.07□□□□□ -0.16
UBE4B-203ENST00000377153 POMT2Q9UKY4 750 aa14.07□□□□□ -0.16
UBE4B-203ENST00000377153 PLAGL1Q9UM63 463 aa14.07□□□□□ -0.16
UBE4B-203ENST00000377153 KNTC1P50748 2209 aa14.06□□□□□ -0.16
UBE4B-203ENST00000377153 CXorf49A8MYA2 514 aaPredicted RBP14.06□□□□□ -0.16
UBE4B-203ENST00000377153 BRINP1O60477 761 aa14.06□□□□□ -0.16
UBE4B-203ENST00000377153 PSIP1O75475 530 aaKnown RBP14.06□□□□□ -0.16
UBE4B-203ENST00000377153 SYF2O95926 243 aaKnown RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms