RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 TRIM73Q86UV7 250 aa20.35■□□□□ 0.85
VSX1-201ENST00000376707 C19orf47Q8N9M1 422 aaKnown RBP20.35■□□□□ 0.85
VSX1-201ENST00000376707 OR13J1Q8NGT2 312 aa20.35■□□□□ 0.85
VSX1-201ENST00000376707 ADAMTS17Q8TE56 1095 aa20.35■□□□□ 0.85
VSX1-201ENST00000376707 C1orf54Q8WWF1 131 aa20.35■□□□□ 0.85
VSX1-201ENST00000376707 COL26A1Q96A83 441 aa20.35■□□□□ 0.85
VSX1-201ENST00000376707 MIB2Q96AX9 1013 aa20.35■□□□□ 0.85
VSX1-201ENST00000376707 DPH2Q9BQC3 489 aaPredicted RBP20.35■□□□□ 0.85
VSX1-201ENST00000376707 ZNF148Q9UQR1 794 aa20.35■□□□□ 0.85
VSX1-201ENST00000376707 PCDHGA9Q9Y5G4 932 aaKnown RBP20.35■□□□□ 0.85
VSX1-201ENST00000376707 SLC5A10A0PJK1 596 aa20.34■□□□□ 0.85
VSX1-201ENST00000376707 C9J4A7 227 aa20.34■□□□□ 0.85
VSX1-201ENST00000376707 KDM1AO60341 852 aa20.34■□□□□ 0.85
VSX1-201ENST00000376707 GOT2P00505 430 aaKnown RBP20.34■□□□□ 0.85
VSX1-201ENST00000376707 CHRM5P08912 532 aaPredicted RBP20.34■□□□□ 0.85
VSX1-201ENST00000376707 AGXTP21549 392 aa20.34■□□□□ 0.85
VSX1-201ENST00000376707 SIX1Q15475 284 aaPredicted RBP20.34■□□□□ 0.85
VSX1-201ENST00000376707 TSTD2Q5T7W7 516 aa20.34■□□□□ 0.85
VSX1-201ENST00000376707 OR6P1Q8NGX9 317 aa20.34■□□□□ 0.85
VSX1-201ENST00000376707 OR5K2Q8NHB8 316 aa20.34■□□□□ 0.85
VSX1-201ENST00000376707 TCTN2Q96GX1 697 aa20.34■□□□□ 0.85
VSX1-201ENST00000376707 OR6C2Q9NZP2 312 aa20.34■□□□□ 0.85
VSX1-201ENST00000376707 SLC2A6Q9UGQ3 507 aa20.34■□□□□ 0.85
VSX1-201ENST00000376707 RIMKLBQ9ULI2 386 aa20.34■□□□□ 0.85
VSX1-201ENST00000376707 CYSRT1A8MQ03 144 aa20.33■□□□□ 0.85
VSX1-201ENST00000376707 BHMG1C9JSJ3 638 aaPredicted RBP20.33■□□□□ 0.85
VSX1-201ENST00000376707 OR1I1O60431 355 aa20.33■□□□□ 0.85
VSX1-201ENST00000376707 TMEM63AO94886 807 aa20.33■□□□□ 0.85
VSX1-201ENST00000376707 CAPN1P07384 714 aa20.33■□□□□ 0.85
VSX1-201ENST00000376707 CCDC175P0C221 793 aa20.33■□□□□ 0.85
VSX1-201ENST00000376707 ADRA1DP25100 572 aa20.33■□□□□ 0.85
VSX1-201ENST00000376707 CSE1LP55060 971 aaKnown RBP20.33■□□□□ 0.85
VSX1-201ENST00000376707 NCF4Q15080 339 aa20.33■□□□□ 0.85
VSX1-201ENST00000376707 FAM69BQ5VUD6 431 aa20.33■□□□□ 0.85
VSX1-201ENST00000376707 DRICH1Q6PGQ1 229 aaPredicted RBP20.33■□□□□ 0.85
VSX1-201ENST00000376707 OR4L1Q8NH43 312 aa20.33■□□□□ 0.85
VSX1-201ENST00000376707 OR2A14Q96R47 310 aa20.33■□□□□ 0.85
VSX1-201ENST00000376707 RANBP9Q96S59 729 aa20.33■□□□□ 0.85
VSX1-201ENST00000376707 FAM60AQ9NP50 221 aa20.33■□□□□ 0.85
VSX1-201ENST00000376707 RAB6BQ9NRW1 208 aa20.33■□□□□ 0.85
VSX1-201ENST00000376707 SPHK1Q9NYA1 384 aa20.33■□□□□ 0.85
VSX1-201ENST00000376707 G3BP2Q9UN86 482 aaKnown RBP20.33■□□□□ 0.85
VSX1-201ENST00000376707 PADI2Q9Y2J8 665 aa20.33■□□□□ 0.85
VSX1-201ENST00000376707 A0A0J9YY10 115 aa20.32■□□□□ 0.84
VSX1-201ENST00000376707 TTLL8A6PVC2 850 aa20.32■□□□□ 0.84
VSX1-201ENST00000376707 OR2B3O76000 313 aa20.32■□□□□ 0.84
VSX1-201ENST00000376707 PPARGP37231 505 aaPredicted RBP20.32■□□□□ 0.84
VSX1-201ENST00000376707 GRIA1P42261 906 aa20.32■□□□□ 0.84
VSX1-201ENST00000376707 CD97P48960 835 aa20.32■□□□□ 0.84
VSX1-201ENST00000376707 PRAMEP78395 509 aa20.32■□□□□ 0.84
VSX1-201ENST00000376707 SNX1Q13596 522 aa20.32■□□□□ 0.84
VSX1-201ENST00000376707 CCNG2Q16589 344 aa20.32■□□□□ 0.84
VSX1-201ENST00000376707 DEFB110Q30KQ9 67 aa20.32■□□□□ 0.84
VSX1-201ENST00000376707 FASTKD1Q53R41 847 aaKnown RBP20.32■□□□□ 0.84
VSX1-201ENST00000376707 NLRP9Q7RTR0 991 aa20.32■□□□□ 0.84
VSX1-201ENST00000376707 LRRC8AQ8IWT6 810 aa20.32■□□□□ 0.84
VSX1-201ENST00000376707 CCDC89Q8N998 374 aa20.32■□□□□ 0.84
VSX1-201ENST00000376707 C17orf62Q9BQA9 187 aa20.32■□□□□ 0.84
VSX1-201ENST00000376707 TSSK1BQ9BXA7 367 aa20.32■□□□□ 0.84
VSX1-201ENST00000376707 MLXIPLQ9NP71 852 aa20.32■□□□□ 0.84
VSX1-201ENST00000376707 LZTFL1Q9NQ48 299 aa20.32■□□□□ 0.84
VSX1-201ENST00000376707 CASS4Q9NQ75 786 aa20.32■□□□□ 0.84
VSX1-201ENST00000376707 PAK5Q9P286 719 aa20.32■□□□□ 0.84
VSX1-201ENST00000376707 ANKMY1Q9P2S6 941 aa20.32■□□□□ 0.84
VSX1-201ENST00000376707 PLAGL1Q9UM63 463 aa20.32■□□□□ 0.84
VSX1-201ENST00000376707 ZKSCAN5Q9Y2L8 839 aa20.32■□□□□ 0.84
VSX1-201ENST00000376707 AP1M2Q9Y6Q5 423 aa20.32■□□□□ 0.84
VSX1-201ENST00000376707 ISM1B1AKI9 464 aa20.31■□□□□ 0.84
VSX1-201ENST00000376707 APRTP07741 180 aa20.31■□□□□ 0.84
VSX1-201ENST00000376707 TPBGLP0DKB5 382 aa20.31■□□□□ 0.84
VSX1-201ENST00000376707 ETS1P14921 441 aa20.31■□□□□ 0.84
VSX1-201ENST00000376707 ACVR1Q04771 509 aa20.31■□□□□ 0.84
VSX1-201ENST00000376707 ZIC1Q15915 447 aa20.31■□□□□ 0.84
VSX1-201ENST00000376707 MED25Q71SY5 747 aa20.31■□□□□ 0.84
VSX1-201ENST00000376707 PRUNE1Q86TP1 453 aa20.31■□□□□ 0.84
VSX1-201ENST00000376707 RAB43Q86YS6 212 aa20.31■□□□□ 0.84
VSX1-201ENST00000376707 EFCAB3Q8N7B9 438 aa20.31■□□□□ 0.84
VSX1-201ENST00000376707 GLIS1Q8NBF1 620 aa20.31■□□□□ 0.84
VSX1-201ENST00000376707 PEX13Q92968 403 aa20.31■□□□□ 0.84
VSX1-201ENST00000376707 ZNF778Q96MU6 729 aa20.31■□□□□ 0.84
VSX1-201ENST00000376707 DHRS4Q9BTZ2 278 aa20.31■□□□□ 0.84
VSX1-201ENST00000376707 CHRNA10Q9GZZ6 450 aa20.31■□□□□ 0.84
VSX1-201ENST00000376707 IRAK4Q9NWZ3 460 aa20.31■□□□□ 0.84
VSX1-201ENST00000376707 ANAPC5Q9UJX4 755 aa20.31■□□□□ 0.84
VSX1-201ENST00000376707 DRG1Q9Y295 367 aaKnown RBP20.31■□□□□ 0.84
VSX1-201ENST00000376707 TCAF1Q9Y4C2 921 aa20.31■□□□□ 0.84
VSX1-201ENST00000376707 ZNF451Q9Y4E5 1061 aa20.31■□□□□ 0.84
VSX1-201ENST00000376707 PIKFYVEQ9Y2I7 2098 aa20.3■□□□□ 0.84
VSX1-201ENST00000376707 CCR7P32248 378 aa20.3■□□□□ 0.84
VSX1-201ENST00000376707 RRADP55042 308 aa20.3■□□□□ 0.84
VSX1-201ENST00000376707 HSPA14Q0VDF9 509 aa20.3■□□□□ 0.84
VSX1-201ENST00000376707 KIR2DS3Q14952 304 aa20.3■□□□□ 0.84
VSX1-201ENST00000376707 SLC5A12Q1EHB4 618 aa20.3■□□□□ 0.84
VSX1-201ENST00000376707 DNAJC21Q5F1R6 531 aaKnown RBP20.3■□□□□ 0.84
VSX1-201ENST00000376707 AARS2Q5JTZ9 985 aaKnown RBP20.3■□□□□ 0.84
VSX1-201ENST00000376707 MLIPQ5VWP3 458 aa20.3■□□□□ 0.84
VSX1-201ENST00000376707 PAPD7Q5XG87 772 aaKnown RBP20.3■□□□□ 0.84
VSX1-201ENST00000376707 ZNF385CQ66K41 422 aaPredicted RBP20.3■□□□□ 0.84
VSX1-201ENST00000376707 ZNF534Q76KX8 674 aa20.3■□□□□ 0.84
VSX1-201ENST00000376707 SLC22A15Q8IZD6 547 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms