RNA–Protein interactions for RNA: ENST00000376177.6

DDX39B-201, Transcript of DExD-box helicase 39B, humanhuman

TSL 5 BASIC

Gene DDX39B, Length 1,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-201ENST00000376177 THAP4Q8WY91 577 aa10.72□□□□□ -0.69
DDX39B-201ENST00000376177 SPDL1Q96EA4 605 aa10.72□□□□□ -0.69
DDX39B-201ENST00000376177 NUDCD1Q96RS6 583 aa10.72□□□□□ -0.69
DDX39B-201ENST00000376177 VPS37BQ9H9H4 285 aa10.72□□□□□ -0.69
DDX39B-201ENST00000376177 SCHIP1Q9P0W5 487 aaPredicted RBP10.72□□□□□ -0.69
DDX39B-201ENST00000376177 TBK1Q9UHD2 729 aa10.72□□□□□ -0.69
DDX39B-201ENST00000376177 R3HDM2Q9Y2K5 976 aaKnown RBP10.72□□□□□ -0.69
DDX39B-201ENST00000376177 LRCH1Q9Y2L9 728 aa10.72□□□□□ -0.69
DDX39B-201ENST00000376177 NAV3Q8IVL0 2385 aa10.71□□□□□ -0.69
DDX39B-201ENST00000376177 FER1L5A0AVI2 2057 aa10.71□□□□□ -0.69
DDX39B-201ENST00000376177 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.71□□□□□ -0.69
DDX39B-201ENST00000376177 C21orf140B9A014 251 aa10.71□□□□□ -0.69
DDX39B-201ENST00000376177 F8W8V4 182 aa10.71□□□□□ -0.69
DDX39B-201ENST00000376177 PEX11AO75192 247 aa10.71□□□□□ -0.69
DDX39B-201ENST00000376177 KRT1P04264 644 aa10.71□□□□□ -0.69
DDX39B-201ENST00000376177 CREB1P16220 341 aa10.71□□□□□ -0.69
DDX39B-201ENST00000376177 PECAM1P16284 738 aaPredicted RBP10.71□□□□□ -0.69
DDX39B-201ENST00000376177 VIPR1P32241 457 aa10.71□□□□□ -0.69
DDX39B-201ENST00000376177 SNX16P57768 344 aa10.71□□□□□ -0.69
DDX39B-201ENST00000376177 KLC1Q07866 573 aa10.71□□□□□ -0.69
DDX39B-201ENST00000376177 GPS1Q13098 491 aa10.71□□□□□ -0.69
DDX39B-201ENST00000376177 TESK1Q15569 626 aa10.71□□□□□ -0.69
DDX39B-201ENST00000376177 GSTA3Q16772 222 aa10.71□□□□□ -0.69
DDX39B-201ENST00000376177 DNAJC24Q6P3W2 148 aa10.71□□□□□ -0.69
DDX39B-201ENST00000376177 C4orf22Q6V702 233 aa10.71□□□□□ -0.69
DDX39B-201ENST00000376177 SPOCD1Q6ZMY3 1216 aa10.71□□□□□ -0.69
DDX39B-201ENST00000376177 FAM92BQ6ZTR7 304 aa10.71□□□□□ -0.69
DDX39B-201ENST00000376177 GALNT13Q8IUC8 556 aa10.71□□□□□ -0.69
DDX39B-201ENST00000376177 PDIK1LQ8N165 341 aa10.71□□□□□ -0.69
DDX39B-201ENST00000376177 KIF2BQ8N4N8 673 aa10.71□□□□□ -0.69
DDX39B-201ENST00000376177 PPFIBP2Q8ND30 876 aa10.71□□□□□ -0.69
DDX39B-201ENST00000376177 SLC35B2Q8TB61 432 aa10.71□□□□□ -0.69
DDX39B-201ENST00000376177 ZNF75CPQ92670 426 aaPredicted RBP10.71□□□□□ -0.69
DDX39B-201ENST00000376177 SCAMP4Q969E2 229 aa10.71□□□□□ -0.69
DDX39B-201ENST00000376177 CYTH2Q99418 400 aa10.71□□□□□ -0.69
DDX39B-201ENST00000376177 OSGIN2Q9Y236 505 aa10.71□□□□□ -0.69
DDX39B-201ENST00000376177 PCDHGC4Q9Y5F7 938 aa10.71□□□□□ -0.69
DDX39B-201ENST00000376177 SPTBP11277 2137 aa10.71□□□□□ -0.7
DDX39B-201ENST00000376177 PKDREJQ9NTG1 2253 aa10.7□□□□□ -0.7
DDX39B-201ENST00000376177 hCG_1818297A0A087WSY0 165 aa10.7□□□□□ -0.7
DDX39B-201ENST00000376177 MASP2O00187 686 aa10.7□□□□□ -0.7
DDX39B-201ENST00000376177 CREB3O43889 395 aa10.7□□□□□ -0.7
DDX39B-201ENST00000376177 HAUS5O94927 633 aa10.7□□□□□ -0.7
DDX39B-201ENST00000376177 FESP07332 822 aa10.7□□□□□ -0.7
DDX39B-201ENST00000376177 ACP5P13686 325 aa10.7□□□□□ -0.7
DDX39B-201ENST00000376177 FOLR1P15328 257 aa10.7□□□□□ -0.7
DDX39B-201ENST00000376177 GCAP28676 217 aa10.7□□□□□ -0.7
DDX39B-201ENST00000376177 CA5AP35218 305 aa10.7□□□□□ -0.7
DDX39B-201ENST00000376177 GPR1P46091 355 aa10.7□□□□□ -0.7
DDX39B-201ENST00000376177 PAPOLAP51003 745 aaKnown RBP10.7□□□□□ -0.7
DDX39B-201ENST00000376177 SCNN1BP51168 640 aa10.7□□□□□ -0.7
DDX39B-201ENST00000376177 EPHA4P54764 986 aa10.7□□□□□ -0.7
DDX39B-201ENST00000376177 YBEYP58557 167 aaPredicted RBP10.7□□□□□ -0.7
DDX39B-201ENST00000376177 IL11RAQ14626 422 aa10.7□□□□□ -0.7
DDX39B-201ENST00000376177 TRIP13Q15645 432 aaPredicted RBP10.7□□□□□ -0.7
DDX39B-201ENST00000376177 PARP15Q460N3 678 aa10.7□□□□□ -0.7
DDX39B-201ENST00000376177 UBAP2Q5T6F2 1119 aaKnown RBP10.7□□□□□ -0.7
DDX39B-201ENST00000376177 LGSNQ5TDP6 509 aa10.7□□□□□ -0.7
DDX39B-201ENST00000376177 C6orf163Q5TEZ5 329 aa10.7□□□□□ -0.7
DDX39B-201ENST00000376177 FAM47EQ6ZV65 393 aa10.7□□□□□ -0.7
DDX39B-201ENST00000376177 TECPR1Q7Z6L1 1165 aa10.7□□□□□ -0.7
DDX39B-201ENST00000376177 CLNKQ7Z7G1 428 aa10.7□□□□□ -0.7
DDX39B-201ENST00000376177 SYVN1Q86TM6 617 aa10.7□□□□□ -0.7
DDX39B-201ENST00000376177 PLXDC1Q8IUK5 500 aa10.7□□□□□ -0.7
DDX39B-201ENST00000376177 ZBED8Q8IZ13 594 aa10.7□□□□□ -0.7
DDX39B-201ENST00000376177 UMODL1-AS1Q8N2C9 162 aa10.7□□□□□ -0.7
DDX39B-201ENST00000376177 PYROXD1Q8WU10 500 aa10.7□□□□□ -0.7
DDX39B-201ENST00000376177 FAM172AQ8WUF8 416 aa10.7□□□□□ -0.7
DDX39B-201ENST00000376177 DNAJC9Q8WXX5 260 aa10.7□□□□□ -0.7
DDX39B-201ENST00000376177 RSC1A1Q92681 617 aa10.7□□□□□ -0.7
DDX39B-201ENST00000376177 SLC7A6OSQ96CW6 309 aaPredicted RBP10.7□□□□□ -0.7
DDX39B-201ENST00000376177 SH3GL3Q99963 347 aa10.7□□□□□ -0.7
DDX39B-201ENST00000376177 PAIP2Q9BPZ3 127 aaKnown RBP10.7□□□□□ -0.7
DDX39B-201ENST00000376177 C11orf70Q9BRQ4 267 aa10.7□□□□□ -0.7
DDX39B-201ENST00000376177 BTBD10Q9BSF8 475 aa10.7□□□□□ -0.7
DDX39B-201ENST00000376177 SLC39A8Q9C0K1 460 aa10.7□□□□□ -0.7
DDX39B-201ENST00000376177 ABCG8Q9H221 673 aa10.7□□□□□ -0.7
DDX39B-201ENST00000376177 FAM96AQ9H5X1 160 aa10.7□□□□□ -0.7
DDX39B-201ENST00000376177 RETREG1Q9H6L5 497 aa10.7□□□□□ -0.7
DDX39B-201ENST00000376177 MKS1Q9NXB0 559 aa10.7□□□□□ -0.7
DDX39B-201ENST00000376177 CPNE7Q9UBL6 633 aa10.7□□□□□ -0.7
DDX39B-201ENST00000376177 ZNHIT2Q9UHR6 403 aa10.7□□□□□ -0.7
DDX39B-201ENST00000376177 IKBKGQ9Y6K9 419 aa10.7□□□□□ -0.7
DDX39B-201ENST00000376177 C2CD4BA6NLJ0 364 aa10.69□□□□□ -0.7
DDX39B-201ENST00000376177 WASH4PA8MWX3 477 aa10.69□□□□□ -0.7
DDX39B-201ENST00000376177 TMEM63AO94886 807 aa10.69□□□□□ -0.7
DDX39B-201ENST00000376177 CTPS1P17812 591 aa10.69□□□□□ -0.7
DDX39B-201ENST00000376177 STIP1P31948 543 aaKnown RBP10.69□□□□□ -0.7
DDX39B-201ENST00000376177 PCK1P35558 622 aa10.69□□□□□ -0.7
DDX39B-201ENST00000376177 CSNK1DP48730 415 aa10.69□□□□□ -0.7
DDX39B-201ENST00000376177 TAS2R40P59535 323 aa10.69□□□□□ -0.7
DDX39B-201ENST00000376177 KRTAP10-9P60411 292 aa10.69□□□□□ -0.7
DDX39B-201ENST00000376177 UBE2IP63279 158 aaKnown RBP10.69□□□□□ -0.7
DDX39B-201ENST00000376177 PDIA2Q13087 525 aaKnown RBP10.69□□□□□ -0.7
DDX39B-201ENST00000376177 PEX6Q13608 980 aa10.69□□□□□ -0.7
DDX39B-201ENST00000376177 ELOAQ14241 798 aaKnown RBP10.69□□□□□ -0.7
DDX39B-201ENST00000376177 TAZQ16635 292 aa10.69□□□□□ -0.7
DDX39B-201ENST00000376177 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.69□□□□□ -0.71e-30■■□□□ 13.8
DDX39B-201ENST00000376177 DCUN1D2Q6PH85 259 aa10.69□□□□□ -0.7
DDX39B-201ENST00000376177 BBS12Q6ZW61 710 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms