RNA–Protein interactions for RNA: ENST00000375820.8

COL4A1-201, Transcript of collagen type IV alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A1, Length 6,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-201ENST00000375820 RHOQP17081 205 aa13.48□□□□□ -0.25
COL4A1-201ENST00000375820 UGT1A6P19224 532 aa13.48□□□□□ -0.25
COL4A1-201ENST00000375820 UGT1A1P22309 533 aa13.48□□□□□ -0.25
COL4A1-201ENST00000375820 UGT1A4P22310 534 aa13.48□□□□□ -0.25
COL4A1-201ENST00000375820 CCNOP22674 350 aa13.48□□□□□ -0.25
COL4A1-201ENST00000375820 MMP8P22894 467 aa13.48□□□□□ -0.25
COL4A1-201ENST00000375820 UGT1A3P35503 534 aa13.48□□□□□ -0.25
COL4A1-201ENST00000375820 LCP2Q13094 533 aa13.48□□□□□ -0.25
COL4A1-201ENST00000375820 MAPK14Q16539 360 aa13.48□□□□□ -0.25
COL4A1-201ENST00000375820 ATAT1Q5SQI0 421 aa13.48□□□□□ -0.25
COL4A1-201ENST00000375820 ENPP7Q6UWV6 458 aa13.48□□□□□ -0.25
COL4A1-201ENST00000375820 NUP54Q7Z3B4 507 aa13.48□□□□□ -0.25
COL4A1-201ENST00000375820 OR13C4Q8NGS5 318 aa13.48□□□□□ -0.25
COL4A1-201ENST00000375820 OR2L8Q8NGY9 312 aa13.48□□□□□ -0.25
COL4A1-201ENST00000375820 SCLYQ96I15 445 aa13.48□□□□□ -0.25
COL4A1-201ENST00000375820 ZSWIM3Q96MP5 696 aa13.48□□□□□ -0.25
COL4A1-201ENST00000375820 BARD1Q99728 777 aaKnown RBP13.48□□□□□ -0.25
COL4A1-201ENST00000375820 ADAM7Q9H2U9 754 aa13.48□□□□□ -0.25
COL4A1-201ENST00000375820 PNPLA8Q9NP80 782 aa13.48□□□□□ -0.25
COL4A1-201ENST00000375820 ARHGEF4Q9NR80 690 aa13.48□□□□□ -0.25
COL4A1-201ENST00000375820 PLAGL1Q9UM63 463 aa13.48□□□□□ -0.25
COL4A1-201ENST00000375820 SYNPO2Q9UMS6 1093 aa13.48□□□□□ -0.25
COL4A1-201ENST00000375820 BAIAP2Q9UQB8 552 aa13.48□□□□□ -0.25
COL4A1-201ENST00000375820 DIP2BQ9P265 1576 aa13.48□□□□□ -0.25
COL4A1-201ENST00000375820 OR14I1A6ND48 311 aa13.48□□□□□ -0.25
COL4A1-201ENST00000375820 WFS1O76024 890 aa13.48□□□□□ -0.25
COL4A1-201ENST00000375820 TGDSO95455 350 aa13.48□□□□□ -0.25
COL4A1-201ENST00000375820 CH25HO95992 272 aa13.48□□□□□ -0.25
COL4A1-201ENST00000375820 APOC1P02654 83 aa13.48□□□□□ -0.25
COL4A1-201ENST00000375820 TPSB2P20231 275 aa13.48□□□□□ -0.25
COL4A1-201ENST00000375820 TPSAB1Q15661 275 aa13.48□□□□□ -0.25
COL4A1-201ENST00000375820 C4orf46Q504U0 113 aa13.48□□□□□ -0.25
COL4A1-201ENST00000375820 SLC24A5Q71RS6 500 aa13.48□□□□□ -0.25
COL4A1-201ENST00000375820 CORO1CQ9ULV4 474 aaPredicted RBP13.48□□□□□ -0.25
COL4A1-201ENST00000375820 TCAF2A6NFQ2 919 aa13.47□□□□□ -0.25
COL4A1-201ENST00000375820 CYB5AP00167 134 aa13.47□□□□□ -0.25
COL4A1-201ENST00000375820 ACP5P13686 325 aa13.47□□□□□ -0.25
COL4A1-201ENST00000375820 LAPTM5Q13571 262 aa13.47□□□□□ -0.25
COL4A1-201ENST00000375820 RFTN2Q52LD8 501 aaPredicted RBP13.47□□□□□ -0.25
COL4A1-201ENST00000375820 ARSIQ5FYB1 569 aa13.47□□□□□ -0.25
COL4A1-201ENST00000375820 PGAM4Q8N0Y7 254 aa13.47□□□□□ -0.25
COL4A1-201ENST00000375820 INPP4AQ96PE3 977 aaPredicted RBP13.47□□□□□ -0.25
COL4A1-201ENST00000375820 GPATCH1Q9BRR8 931 aaKnown RBP13.47□□□□□ -0.25
COL4A1-201ENST00000375820 TMED9Q9BVK6 235 aa13.47□□□□□ -0.25
COL4A1-201ENST00000375820 BTBD19C9JJ37 291 aa13.47□□□□□ -0.25
COL4A1-201ENST00000375820 ACSL1P33121 698 aa13.47□□□□□ -0.25
COL4A1-201ENST00000375820 DGKGP49619 791 aa13.47□□□□□ -0.25
COL4A1-201ENST00000375820 CDH4P55283 916 aa13.47□□□□□ -0.25
COL4A1-201ENST00000375820 OGFRL1Q5TC84 451 aaPredicted RBP13.47□□□□□ -0.25
COL4A1-201ENST00000375820 UFD1Q92890 307 aa13.47□□□□□ -0.25
COL4A1-201ENST00000375820 ZNF639Q9UID6 485 aa13.47□□□□□ -0.25
COL4A1-201ENST00000375820 GPR89AB7ZAQ6 455 aa13.47□□□□□ -0.25
COL4A1-201ENST00000375820 PLK4O00444 970 aa13.47□□□□□ -0.25
COL4A1-201ENST00000375820 TBX1O43435 398 aa13.47□□□□□ -0.25
COL4A1-201ENST00000375820 CBFA2T3O75081 653 aa13.47□□□□□ -0.25
COL4A1-201ENST00000375820 GPR89BP0CG08 455 aa13.47□□□□□ -0.25
COL4A1-201ENST00000375820 TSTD2Q5T7W7 516 aa13.47□□□□□ -0.25
COL4A1-201ENST00000375820 FSTL5Q8N475 847 aaPredicted RBP13.47□□□□□ -0.25
COL4A1-201ENST00000375820 VGLL2Q8N8G2 317 aa13.47□□□□□ -0.25
COL4A1-201ENST00000375820 LSM14AQ8ND56 463 aaKnown RBP13.47□□□□□ -0.25
COL4A1-201ENST00000375820 TFAP2BQ92481 460 aa13.47□□□□□ -0.25
COL4A1-201ENST00000375820 MCCC1Q96RQ3 725 aaPredicted RBP13.47□□□□□ -0.25
COL4A1-201ENST00000375820 HEPHQ9BQS7 1158 aa13.47□□□□□ -0.25
COL4A1-201ENST00000375820 HPF1Q9NWY4 346 aa13.47□□□□□ -0.25
COL4A1-201ENST00000375820 PIK3C2BO00750 1634 aa13.47□□□□□ -0.25
COL4A1-201ENST00000375820 SLC38A8A6NNN8 435 aa13.47□□□□□ -0.25
COL4A1-201ENST00000375820 ALPPP05187 535 aa13.47□□□□□ -0.25
COL4A1-201ENST00000375820 ZNF20P17024 532 aa13.47□□□□□ -0.25
COL4A1-201ENST00000375820 DEFA5Q01523 94 aa13.47□□□□□ -0.25
COL4A1-201ENST00000375820 PRKCDQ05655 676 aa13.47□□□□□ -0.25
COL4A1-201ENST00000375820 COL9A3Q14050 684 aaPredicted RBP13.47□□□□□ -0.25
COL4A1-201ENST00000375820 LRP8Q14114 963 aa13.47□□□□□ -0.25
COL4A1-201ENST00000375820 VARS2Q5ST30 1063 aaKnown RBP13.47□□□□□ -0.25
COL4A1-201ENST00000375820 RASGRP3Q8IV61 690 aa13.47□□□□□ -0.25
COL4A1-201ENST00000375820 OVCA2Q8WZ82 227 aa13.47□□□□□ -0.25
COL4A1-201ENST00000375820 SEC61A2Q9H9S3 476 aa13.47□□□□□ -0.25
COL4A1-201ENST00000375820 IFT80Q9P2H3 777 aaPredicted RBP13.47□□□□□ -0.25
COL4A1-201ENST00000375820 TBC1D14Q9P2M4 693 aa13.47□□□□□ -0.25
COL4A1-201ENST00000375820 TRMUO75648 421 aaKnown RBP13.47□□□□□ -0.25
COL4A1-201ENST00000375820 FSHRP23945 695 aa13.47□□□□□ -0.25
COL4A1-201ENST00000375820 BMT2Q1RMZ1 405 aa13.47□□□□□ -0.25
COL4A1-201ENST00000375820 RASGEF1AQ8N9B8 481 aa13.47□□□□□ -0.25
COL4A1-201ENST00000375820 SLC22A8Q8TCC7 542 aa13.47□□□□□ -0.25
COL4A1-201ENST00000375820 DENND2DQ9H6A0 471 aaPredicted RBP13.47□□□□□ -0.25
COL4A1-201ENST00000375820 ZNF358Q9NW07 568 aa13.47□□□□□ -0.25
COL4A1-201ENST00000375820 DKK3Q9UBP4 350 aa13.47□□□□□ -0.25
COL4A1-201ENST00000375820 ZNF69Q9UC07 566 aa13.47□□□□□ -0.25
COL4A1-201ENST00000375820 PPRC1Q5VV67 1664 aaKnown RBP13.47□□□□□ -0.25
COL4A1-201ENST00000375820 A0A1W2PRU2 124 aa13.47□□□□□ -0.25
COL4A1-201ENST00000375820 TRAFD1O14545 582 aaPredicted RBP13.47□□□□□ -0.25
COL4A1-201ENST00000375820 CCNCP24863 283 aa13.47□□□□□ -0.25
COL4A1-201ENST00000375820 LIMK2P53671 638 aa13.47□□□□□ -0.25
COL4A1-201ENST00000375820 DCDC1P59894 354 aa13.47□□□□□ -0.25
COL4A1-201ENST00000375820 SPIN3Q5JUX0 258 aa13.47□□□□□ -0.25
COL4A1-201ENST00000375820 IL4I1Q96RQ9 567 aa13.47□□□□□ -0.25
COL4A1-201ENST00000375820 PDE10AQ9Y233 779 aa13.47□□□□□ -0.25
COL4A1-201ENST00000375820 A0A1B0GVT2 93 aa13.46□□□□□ -0.25
COL4A1-201ENST00000375820 NEMP2A6NFY4 417 aa13.46□□□□□ -0.25
COL4A1-201ENST00000375820 GBAP04062 536 aa13.46□□□□□ -0.25
COL4A1-201ENST00000375820 RPL10P27635 214 aaKnown RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms