RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 GPN2Q9H9Y4 310 aaPredicted RBP14.25□□□□□ -0.13
MSH5-201ENST00000375703 DCAF13Q9NV06 445 aaKnown RBP14.25□□□□□ -0.13
MSH5-201ENST00000375703 CHCHD3Q9NX63 227 aaKnown RBP14.25□□□□□ -0.13
MSH5-201ENST00000375703 AP3M1Q9Y2T2 418 aa14.25□□□□□ -0.13
MSH5-201ENST00000375703 C1orf232A0A0U1RR37 186 aa14.24□□□□□ -0.13
MSH5-201ENST00000375703 LOC100130705A0A1B0GUX0 176 aa14.24□□□□□ -0.13
MSH5-201ENST00000375703 TMEM88BA6NKF7 163 aa14.24□□□□□ -0.13
MSH5-201ENST00000375703 MANBAO00462 879 aa14.24□□□□□ -0.13
MSH5-201ENST00000375703 CA12O43570 354 aa14.24□□□□□ -0.13
MSH5-201ENST00000375703 HS6ST1O60243 411 aa14.24□□□□□ -0.13
MSH5-201ENST00000375703 E2F6O75461 281 aa14.24□□□□□ -0.13
MSH5-201ENST00000375703 ZBTB11O95625 1053 aaPredicted RBP14.24□□□□□ -0.13
MSH5-201ENST00000375703 HMGA1P17096 107 aaKnown RBP14.24□□□□□ -0.13
MSH5-201ENST00000375703 ITGALP20701 1170 aa14.24□□□□□ -0.13
MSH5-201ENST00000375703 PLA2G16P53816 162 aa14.24□□□□□ -0.13
MSH5-201ENST00000375703 TAF12Q16514 161 aa14.24□□□□□ -0.13
MSH5-201ENST00000375703 GTF2IRD2BQ6EKJ0 949 aa14.24□□□□□ -0.13
MSH5-201ENST00000375703 ZNF783Q6ZMS7 281 aa14.24□□□□□ -0.13
MSH5-201ENST00000375703 SAPCD2Q86UD0 394 aa14.24□□□□□ -0.13
MSH5-201ENST00000375703 GTF2IRD2Q86UP8 949 aa14.24□□□□□ -0.13
MSH5-201ENST00000375703 EID3Q8N140 333 aa14.24□□□□□ -0.13
MSH5-201ENST00000375703 KLHL23Q8NBE8 558 aa14.24□□□□□ -0.13
MSH5-201ENST00000375703 OR5K1Q8NHB7 308 aa14.24□□□□□ -0.13
MSH5-201ENST00000375703 CSF3RQ99062 836 aa14.24□□□□□ -0.13
MSH5-201ENST00000375703 BEGAINQ9BUH8 593 aa14.24□□□□□ -0.13
MSH5-201ENST00000375703 KLF16Q9BXK1 252 aaPredicted RBP14.24□□□□□ -0.13
MSH5-201ENST00000375703 KAT8Q9H7Z6 458 aaKnown RBP14.24□□□□□ -0.13
MSH5-201ENST00000375703 IL26Q9NPH9 171 aa14.24□□□□□ -0.13
MSH5-201ENST00000375703 WARS2Q9UGM6 360 aaKnown RBP14.24□□□□□ -0.13
MSH5-201ENST00000375703 BLOC1S6Q9UL45 172 aa14.24□□□□□ -0.13
MSH5-201ENST00000375703 PCDHB14Q9Y5E9 798 aa14.24□□□□□ -0.13
MSH5-201ENST00000375703 C2orf78A6NCI8 922 aa14.24□□□□□ -0.13
MSH5-201ENST00000375703 K7ERQ8 282 aa14.24□□□□□ -0.13
MSH5-201ENST00000375703 CLDN7O95471 211 aa14.24□□□□□ -0.13
MSH5-201ENST00000375703 PIGFQ07326 219 aa14.24□□□□□ -0.13
MSH5-201ENST00000375703 CD47Q08722 323 aa14.24□□□□□ -0.13
MSH5-201ENST00000375703 ARHGEF7Q14155 803 aa14.24□□□□□ -0.13
MSH5-201ENST00000375703 CTU2Q2VPK5 515 aaKnown RBP14.24□□□□□ -0.13
MSH5-201ENST00000375703 USP39Q53GS9 565 aaKnown RBP14.24□□□□□ -0.13
MSH5-201ENST00000375703 GPRC6AQ5T6X5 926 aa14.24□□□□□ -0.13
MSH5-201ENST00000375703 ATG9BQ674R7 924 aa14.24□□□□□ -0.13
MSH5-201ENST00000375703 NETO1Q8TDF5 533 aa14.24□□□□□ -0.13
MSH5-201ENST00000375703 FRS2Q8WU20 508 aa14.24□□□□□ -0.13
MSH5-201ENST00000375703 COX4I2Q96KJ9 171 aa14.24□□□□□ -0.13
MSH5-201ENST00000375703 CEP295NLQ96MC4 621 aa14.24□□□□□ -0.13
MSH5-201ENST00000375703 LATS2Q9NRM7 1088 aa14.24□□□□□ -0.13
MSH5-201ENST00000375703 C1orf109Q9NX04 203 aa14.24□□□□□ -0.13
MSH5-201ENST00000375703 TRPS1Q9UHF7 1281 aa14.24□□□□□ -0.13
MSH5-201ENST00000375703 VPS51Q9UID3 782 aa14.24□□□□□ -0.13
MSH5-201ENST00000375703 C3orf18Q9UK00 162 aa14.24□□□□□ -0.13
MSH5-201ENST00000375703 CBFA2T3O75081 653 aa14.23□□□□□ -0.13
MSH5-201ENST00000375703 SERPINA1P01009 418 aa14.23□□□□□ -0.13
MSH5-201ENST00000375703 RETP07949 1114 aa14.23□□□□□ -0.13
MSH5-201ENST00000375703 BCKDHAP12694 445 aa14.23□□□□□ -0.13
MSH5-201ENST00000375703 ZNF12P17014 697 aa14.23□□□□□ -0.13
MSH5-201ENST00000375703 ACRV1P26436 265 aa14.23□□□□□ -0.13
MSH5-201ENST00000375703 TOP3AQ13472 1001 aaPredicted RBP14.23□□□□□ -0.13
MSH5-201ENST00000375703 RNF165Q6ZSG1 346 aa14.23□□□□□ -0.13
MSH5-201ENST00000375703 TMEM179BQ7Z7N9 219 aa14.23□□□□□ -0.13
MSH5-201ENST00000375703 GPR149Q86SP6 731 aa14.23□□□□□ -0.13
MSH5-201ENST00000375703 BCL7CQ8WUZ0 217 aaPredicted RBP14.23□□□□□ -0.13
MSH5-201ENST00000375703 FAM120BQ96EK7 910 aaKnown RBP14.23□□□□□ -0.13
MSH5-201ENST00000375703 SLC6A13Q9NSD5 602 aa14.23□□□□□ -0.13
MSH5-201ENST00000375703 CRLS1Q9UJA2 301 aa14.23□□□□□ -0.13
MSH5-201ENST00000375703 SNX5Q9Y5X3 404 aa14.23□□□□□ -0.13
MSH5-201ENST00000375703 PTGES3LE9PB15 166 aa14.23□□□□□ -0.13
MSH5-201ENST00000375703 STK16O75716 305 aa14.23□□□□□ -0.13
MSH5-201ENST00000375703 SLC10A3P09131 477 aa14.23□□□□□ -0.13
MSH5-201ENST00000375703 AGXTP21549 392 aa14.23□□□□□ -0.13
MSH5-201ENST00000375703 DCTP40126 519 aa14.23□□□□□ -0.13
MSH5-201ENST00000375703 RAB15P59190 212 aa14.23□□□□□ -0.13
MSH5-201ENST00000375703 VAC14Q08AM6 782 aa14.23□□□□□ -0.13
MSH5-201ENST00000375703 SLC8B1Q6J4K2 584 aa14.23□□□□□ -0.13
MSH5-201ENST00000375703 RBM23Q86U06 439 aaKnown RBP14.23□□□□□ -0.13
MSH5-201ENST00000375703 ASIC5Q9NY37 505 aa14.23□□□□□ -0.13
MSH5-201ENST00000375703 U3KQV3 271 aa14.23□□□□□ -0.13
MSH5-201ENST00000375703 A8MX80 341 aa14.22□□□□□ -0.13
MSH5-201ENST00000375703 ARVCFO00192 962 aa14.22□□□□□ -0.13
MSH5-201ENST00000375703 AREL1O15033 823 aa14.22□□□□□ -0.13
MSH5-201ENST00000375703 ERN1O75460 977 aaKnown RBP14.22□□□□□ -0.13
MSH5-201ENST00000375703 SEC24AO95486 1093 aa14.22□□□□□ -0.13
MSH5-201ENST00000375703 HTR1AP08908 422 aa14.22□□□□□ -0.13
MSH5-201ENST00000375703 CSKP41240 450 aa14.22□□□□□ -0.13
MSH5-201ENST00000375703 GABARAPL2P60520 117 aa14.22□□□□□ -0.13
MSH5-201ENST00000375703 ISL1P61371 349 aa14.22□□□□□ -0.13
MSH5-201ENST00000375703 AP1S1P61966 158 aa14.22□□□□□ -0.13
MSH5-201ENST00000375703 PHC1P78364 1004 aa14.22□□□□□ -0.13
MSH5-201ENST00000375703 BCL2L1Q07817 233 aa14.22□□□□□ -0.13
MSH5-201ENST00000375703 SREBF2Q12772 1141 aa14.22□□□□□ -0.13
MSH5-201ENST00000375703 CHRNA6Q15825 494 aa14.22□□□□□ -0.13
MSH5-201ENST00000375703 CPSF6Q16630 551 aaKnown RBP eCLIP14.22□□□□□ -0.13
MSH5-201ENST00000375703 LYPLAL1Q5VWZ2 237 aa14.22□□□□□ -0.13
MSH5-201ENST00000375703 MBOAT1Q6ZNC8 495 aa14.22□□□□□ -0.13
MSH5-201ENST00000375703 LRRC8DQ7L1W4 858 aa14.22□□□□□ -0.13
MSH5-201ENST00000375703 ZCCHC7Q8N3Z6 543 aaKnown RBP14.22□□□□□ -0.13
MSH5-201ENST00000375703 SLC15A4Q8N697 577 aa14.22□□□□□ -0.13
MSH5-201ENST00000375703 USP7Q93009 1102 aa14.22□□□□□ -0.13
MSH5-201ENST00000375703 BHMTQ93088 406 aa14.22□□□□□ -0.13
MSH5-201ENST00000375703 DGCR6LQ9BY27 220 aa14.22□□□□□ -0.13
MSH5-201ENST00000375703 MAGIXQ9H6Y5 334 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms