RNA–Protein interactions for RNA: ENST00000374342.6

PTPN20-203, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-203ENST00000374342 TTYH1Q9H313 450 aaPredicted RBP16.48■□□□□ 0.23
PTPN20-203ENST00000374342 SDR39U1Q9NRG7 319 aaPredicted RBP16.48■□□□□ 0.23
PTPN20-203ENST00000374342 DNAJC11Q9NVH1 559 aa16.48■□□□□ 0.23
PTPN20-203ENST00000374342 TMEM98Q9Y2Y6 226 aa16.48■□□□□ 0.23
PTPN20-203ENST00000374342 GPR45Q9Y5Y3 372 aa16.48■□□□□ 0.23
PTPN20-203ENST00000374342 PIAS3Q9Y6X2 628 aa16.48■□□□□ 0.23
PTPN20-203ENST00000374342 LIN7AO14910 233 aaPredicted RBP16.47■□□□□ 0.23
PTPN20-203ENST00000374342 VEGFDO43915 354 aa16.47■□□□□ 0.23
PTPN20-203ENST00000374342 CLDN9O95484 217 aa16.47■□□□□ 0.23
PTPN20-203ENST00000374342 KLF8O95600 359 aaPredicted RBP16.47■□□□□ 0.23
PTPN20-203ENST00000374342 HOXB2P14652 356 aa16.47■□□□□ 0.23
PTPN20-203ENST00000374342 MTTPP55157 894 aa16.47■□□□□ 0.23
PTPN20-203ENST00000374342 ACTR3P61158 418 aa16.47■□□□□ 0.23
PTPN20-203ENST00000374342 COL19A1Q14993 1142 aa16.47■□□□□ 0.23
PTPN20-203ENST00000374342 CCSMST1Q4G0I0 132 aa16.47■□□□□ 0.23
PTPN20-203ENST00000374342 SGO1Q5FBB7 561 aa16.47■□□□□ 0.23
PTPN20-203ENST00000374342 PNCKQ6P2M8 343 aa16.47■□□□□ 0.23
PTPN20-203ENST00000374342 ZNF547Q8IVP9 402 aa16.47■□□□□ 0.23
PTPN20-203ENST00000374342 ENDOVQ8N8Q3 282 aaKnown RBP16.47■□□□□ 0.23
PTPN20-203ENST00000374342 ZNF514Q96K75 400 aaPredicted RBP16.47■□□□□ 0.23
PTPN20-203ENST00000374342 SLC29A3Q9BZD2 475 aa16.47■□□□□ 0.23
PTPN20-203ENST00000374342 MKRN2Q9H000 416 aaKnown RBP16.47■□□□□ 0.23
PTPN20-203ENST00000374342 DCLRE1BQ9H816 532 aa16.47■□□□□ 0.23
PTPN20-203ENST00000374342 HEBP1Q9NRV9 189 aa16.47■□□□□ 0.23
PTPN20-203ENST00000374342 FARSBQ9NSD9 589 aaKnown RBP16.47■□□□□ 0.23
PTPN20-203ENST00000374342 GULP1Q9UBP9 304 aa16.47■□□□□ 0.23
PTPN20-203ENST00000374342 POLR3HQ9Y535 204 aaPredicted RBP16.47■□□□□ 0.23
PTPN20-203ENST00000374342 C2CD4DB7Z1M9 353 aa16.47■□□□□ 0.23
PTPN20-203ENST00000374342 MANBAO00462 879 aa16.47■□□□□ 0.23
PTPN20-203ENST00000374342 DPP6P42658 865 aa16.47■□□□□ 0.23
PTPN20-203ENST00000374342 MAPK9P45984 424 aa16.47■□□□□ 0.23
PTPN20-203ENST00000374342 CCDC6Q16204 474 aa16.47■□□□□ 0.23
PTPN20-203ENST00000374342 WSCD2Q2TBF2 565 aa16.47■□□□□ 0.23
PTPN20-203ENST00000374342 NEK5Q6P3R8 708 aa16.47■□□□□ 0.23
PTPN20-203ENST00000374342 IL17RCQ8NAC3 791 aa16.47■□□□□ 0.23
PTPN20-203ENST00000374342 COX14Q96I36 57 aa16.47■□□□□ 0.23
PTPN20-203ENST00000374342 CDRT15Q96T59 188 aa16.47■□□□□ 0.23
PTPN20-203ENST00000374342 SERPINI1Q99574 410 aa16.47■□□□□ 0.23
PTPN20-203ENST00000374342 GABRG3Q99928 467 aa16.47■□□□□ 0.23
PTPN20-203ENST00000374342 FBXL12Q9NXK8 326 aa16.47■□□□□ 0.23
PTPN20-203ENST00000374342 SLC22A14Q9Y267 594 aa16.47■□□□□ 0.23
PTPN20-203ENST00000374342 PRKAB1Q9Y478 270 aa16.47■□□□□ 0.23
PTPN20-203ENST00000374342 LSM1O15116 133 aaKnown RBP16.46■□□□□ 0.23
PTPN20-203ENST00000374342 NRP2O60462 931 aa16.46■□□□□ 0.23
PTPN20-203ENST00000374342 ADAM23O75077 832 aa16.46■□□□□ 0.23
PTPN20-203ENST00000374342 CAPN3P20807 821 aa16.46■□□□□ 0.23
PTPN20-203ENST00000374342 COL9A1P20849 921 aa16.46■□□□□ 0.23
PTPN20-203ENST00000374342 THOP1P52888 689 aa16.46■□□□□ 0.23
PTPN20-203ENST00000374342 RPL38P63173 70 aaKnown RBP16.46■□□□□ 0.23
PTPN20-203ENST00000374342 IRX1P78414 480 aaPredicted RBP16.46■□□□□ 0.23
PTPN20-203ENST00000374342 CDK3Q00526 305 aa16.46■□□□□ 0.23
PTPN20-203ENST00000374342 IRF4Q15306 451 aa16.46■□□□□ 0.23
PTPN20-203ENST00000374342 CPSF6Q16630 551 aaKnown RBP eCLIP16.46■□□□□ 0.23
PTPN20-203ENST00000374342 LAYNQ6UX15 382 aa16.46■□□□□ 0.23
PTPN20-203ENST00000374342 HM13Q8TCT9 377 aa16.46■□□□□ 0.23
PTPN20-203ENST00000374342 KLK6Q92876 244 aa16.46■□□□□ 0.23
PTPN20-203ENST00000374342 BRINP2Q9C0B6 783 aa16.46■□□□□ 0.23
PTPN20-203ENST00000374342 STOX2Q9P2F5 926 aaPredicted RBP16.46■□□□□ 0.23
PTPN20-203ENST00000374342 ZNF490Q9ULM2 529 aaPredicted RBP16.46■□□□□ 0.23
PTPN20-203ENST00000374342 POMPQ9Y244 141 aa16.46■□□□□ 0.23
PTPN20-203ENST00000374342 PCYT1BQ9Y5K3 369 aaPredicted RBP16.46■□□□□ 0.23
PTPN20-203ENST00000374342 UNC80Q8N2C7 3258 aa16.45■□□□□ 0.22
PTPN20-203ENST00000374342 GRXCR2A6NFK2 248 aa16.45■□□□□ 0.22
PTPN20-203ENST00000374342 BBIP1A8MTZ0 92 aa16.45■□□□□ 0.22
PTPN20-203ENST00000374342 ANGPT2O15123 496 aa16.45■□□□□ 0.22
PTPN20-203ENST00000374342 ULK1O75385 1050 aa16.45■□□□□ 0.22
PTPN20-203ENST00000374342 POP7O75817 140 aaKnown RBP16.45■□□□□ 0.22
PTPN20-203ENST00000374342 DNTTP04053 509 aa16.45■□□□□ 0.22
PTPN20-203ENST00000374342 PFN3P60673 137 aa16.45■□□□□ 0.22
PTPN20-203ENST00000374342 LRP8Q14114 963 aa16.45■□□□□ 0.22
PTPN20-203ENST00000374342 NFE2L1Q14494 772 aa16.45■□□□□ 0.22
PTPN20-203ENST00000374342 PDCD4Q53EL6 469 aaKnown RBP16.45■□□□□ 0.22
PTPN20-203ENST00000374342 XKR5Q6UX68 686 aa16.45■□□□□ 0.22
PTPN20-203ENST00000374342 TRMT11Q7Z4G4 463 aaKnown RBP16.45■□□□□ 0.22
PTPN20-203ENST00000374342 MED8Q96G25 268 aa16.45■□□□□ 0.22
PTPN20-203ENST00000374342 CCDC138Q96M89 665 aa16.45■□□□□ 0.22
PTPN20-203ENST00000374342 ZNHIT2Q9UHR6 403 aa16.45■□□□□ 0.22
PTPN20-203ENST00000374342 GPR34Q9UPC5 381 aa16.45■□□□□ 0.22
PTPN20-203ENST00000374342 ZFR2Q9UPR6 939 aaKnown RBP16.45■□□□□ 0.22
PTPN20-203ENST00000374342 SLC28A1O00337 649 aa16.45■□□□□ 0.22
PTPN20-203ENST00000374342 RGS14O43566 566 aa16.45■□□□□ 0.22
PTPN20-203ENST00000374342 KRT6AP02538 564 aa16.45■□□□□ 0.22
PTPN20-203ENST00000374342 KRT6BP04259 564 aa16.45■□□□□ 0.22
PTPN20-203ENST00000374342 KRT6CP48668 564 aa16.45■□□□□ 0.22
PTPN20-203ENST00000374342 SESN3P58005 492 aa16.45■□□□□ 0.22
PTPN20-203ENST00000374342 PSME3P61289 254 aa16.45■□□□□ 0.22
PTPN20-203ENST00000374342 HMGCS1Q01581 520 aa16.45■□□□□ 0.22
PTPN20-203ENST00000374342 IMPG1Q17R60 797 aa16.45■□□□□ 0.22
PTPN20-203ENST00000374342 AP5B1Q2VPB7 878 aa16.45■□□□□ 0.22
PTPN20-203ENST00000374342 VPS26BQ4G0F5 336 aa16.45■□□□□ 0.22
PTPN20-203ENST00000374342 GGTA1PQ4G0N0 100 aa16.45■□□□□ 0.22
PTPN20-203ENST00000374342 PIGGQ5H8A4 983 aa16.45■□□□□ 0.22
PTPN20-203ENST00000374342 AGTRAPQ6RW13 159 aa16.45■□□□□ 0.22
PTPN20-203ENST00000374342 RALGPS2Q86X27 583 aaPredicted RBP16.45■□□□□ 0.22
PTPN20-203ENST00000374342 RNF148Q8N7C7 305 aa16.45■□□□□ 0.22
PTPN20-203ENST00000374342 OR14C36Q8NHC7 312 aa16.45■□□□□ 0.22
PTPN20-203ENST00000374342 KCNV2Q8TDN2 545 aa16.45■□□□□ 0.22
PTPN20-203ENST00000374342 ATL1Q8WXF7 558 aa16.45■□□□□ 0.22
PTPN20-203ENST00000374342 MTFMTQ96DP5 389 aaKnown RBP16.45■□□□□ 0.22
PTPN20-203ENST00000374342 LINC00615Q96LM1 132 aaPredicted RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms