RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 CLGNO14967 610 aa8.52□□□□□ -1.05
SNRNP40-202ENST00000373720 TAPBPO15533 448 aa8.52□□□□□ -1.05
SNRNP40-202ENST00000373720 ATP6AP2O75787 350 aa8.52□□□□□ -1.05
SNRNP40-202ENST00000373720 SCELO95171 688 aa8.52□□□□□ -1.05
SNRNP40-202ENST00000373720 C1SP09871 688 aa8.52□□□□□ -1.05
SNRNP40-202ENST00000373720 ELFN1P0C7U0 828 aa8.52□□□□□ -1.05
SNRNP40-202ENST00000373720 JUPP14923 745 aa8.52□□□□□ -1.05
SNRNP40-202ENST00000373720 TIMP2P16035 220 aa8.52□□□□□ -1.05
SNRNP40-202ENST00000373720 VARSP26640 1264 aaKnown RBP8.52□□□□□ -1.05
SNRNP40-202ENST00000373720 CCR7P32248 378 aa8.52□□□□□ -1.05
SNRNP40-202ENST00000373720 MMP12P39900 470 aa8.52□□□□□ -1.05
SNRNP40-202ENST00000373720 SLC7A2P52569 658 aa8.52□□□□□ -1.05
SNRNP40-202ENST00000373720 CHN2P52757 468 aa8.52□□□□□ -1.05
SNRNP40-202ENST00000373720 CLDN8P56748 225 aa8.52□□□□□ -1.05
SNRNP40-202ENST00000373720 PHEXP78562 749 aa8.52□□□□□ -1.05
SNRNP40-202ENST00000373720 MS4A2Q01362 244 aa8.52□□□□□ -1.05
SNRNP40-202ENST00000373720 GTF2H3Q13889 308 aa8.52□□□□□ -1.05
SNRNP40-202ENST00000373720 GRB7Q14451 532 aa8.52□□□□□ -1.05
SNRNP40-202ENST00000373720 ARHGAP19Q14CB8 494 aa8.52□□□□□ -1.05
SNRNP40-202ENST00000373720 SLC5A9Q2M3M2 681 aa8.52□□□□□ -1.05
SNRNP40-202ENST00000373720 EML3Q32P44 896 aa8.52□□□□□ -1.05
SNRNP40-202ENST00000373720 HNRNPA1L2Q32P51 320 aaKnown RBP8.52□□□□□ -1.05
SNRNP40-202ENST00000373720 GRAMD1BQ3KR37 738 aa8.52□□□□□ -1.05
SNRNP40-202ENST00000373720 VPS26BQ4G0F5 336 aa8.52□□□□□ -1.05
SNRNP40-202ENST00000373720 TMEM52BQ4KMG9 183 aa8.52□□□□□ -1.05
SNRNP40-202ENST00000373720 PAGE2BQ5JRK9 111 aa8.52□□□□□ -1.05
SNRNP40-202ENST00000373720 ATG9BQ674R7 924 aa8.52□□□□□ -1.05
SNRNP40-202ENST00000373720 TRIM68Q6AZZ1 485 aa8.52□□□□□ -1.05
SNRNP40-202ENST00000373720 ERICH5Q6P6B1 374 aa8.52□□□□□ -1.05
SNRNP40-202ENST00000373720 FBXL19Q6PCT2 694 aa8.52□□□□□ -1.05
SNRNP40-202ENST00000373720 CYP20A1Q6UW02 462 aa8.52□□□□□ -1.05
SNRNP40-202ENST00000373720 UNC5DQ6UXZ4 953 aa8.52□□□□□ -1.05
SNRNP40-202ENST00000373720 TMEM184AQ6ZMB5 413 aa8.52□□□□□ -1.05
SNRNP40-202ENST00000373720 ERMP1Q7Z2K6 904 aa8.52□□□□□ -1.05
SNRNP40-202ENST00000373720 ETFBKMTQ8IXQ9 262 aa8.52□□□□□ -1.05
SNRNP40-202ENST00000373720 SLC22A15Q8IZD6 547 aa8.52□□□□□ -1.05
SNRNP40-202ENST00000373720 EID3Q8N140 333 aa8.52□□□□□ -1.05
SNRNP40-202ENST00000373720 PGBD3Q8N328 593 aa8.52□□□□□ -1.05
SNRNP40-202ENST00000373720 CPA6Q8N4T0 437 aa8.52□□□□□ -1.05
SNRNP40-202ENST00000373720 CDYL2Q8N8U2 506 aa8.52□□□□□ -1.05
SNRNP40-202ENST00000373720 MFSD2AQ8NA29 543 aa8.52□□□□□ -1.05
SNRNP40-202ENST00000373720 VN1R2Q8NFZ6 395 aa8.52□□□□□ -1.05
SNRNP40-202ENST00000373720 HMGCLL1Q8TB92 370 aa8.52□□□□□ -1.05
SNRNP40-202ENST00000373720 BADQ92934 168 aa8.52□□□□□ -1.05
SNRNP40-202ENST00000373720 VOPP1Q96AW1 172 aa8.52□□□□□ -1.05
SNRNP40-202ENST00000373720 MIEF2Q96C03 454 aa8.52□□□□□ -1.05
SNRNP40-202ENST00000373720 CENPNQ96H22 339 aaPredicted RBP8.52□□□□□ -1.05
SNRNP40-202ENST00000373720 RPL10LQ96L21 214 aaKnown RBP8.52□□□□□ -1.05
SNRNP40-202ENST00000373720 ZNF597Q96LX8 424 aa8.52□□□□□ -1.05
SNRNP40-202ENST00000373720 NSUN5Q96P11 429 aaKnown RBP8.52□□□□□ -1.05
SNRNP40-202ENST00000373720 SLC30A3Q99726 388 aa8.52□□□□□ -1.05
SNRNP40-202ENST00000373720 HAUS8Q9BT25 410 aa8.52□□□□□ -1.05
SNRNP40-202ENST00000373720 DPY30Q9C005 99 aa8.52□□□□□ -1.05
SNRNP40-202ENST00000373720 UNKQ9C0B0 810 aaKnown RBP8.52□□□□□ -1.05
SNRNP40-202ENST00000373720 KCNH6Q9H252 994 aa8.52□□□□□ -1.05
SNRNP40-202ENST00000373720 NSUN3Q9H649 340 aaKnown RBP8.52□□□□□ -1.05
SNRNP40-202ENST00000373720 MAGIXQ9H6Y5 334 aa8.52□□□□□ -1.05
SNRNP40-202ENST00000373720 LRTM1Q9HBL6 345 aa8.52□□□□□ -1.05
SNRNP40-202ENST00000373720 TNFRSF12AQ9NP84 129 aa8.52□□□□□ -1.05
SNRNP40-202ENST00000373720 ZNF225Q9UK10 706 aa8.52□□□□□ -1.05
SNRNP40-202ENST00000373720 ADAMTS6Q9UKP5 1117 aa8.52□□□□□ -1.05
SNRNP40-202ENST00000373720 ZNF490Q9ULM2 529 aaPredicted RBP8.52□□□□□ -1.05
SNRNP40-202ENST00000373720 MAN2B2Q9Y2E5 1009 aa8.52□□□□□ -1.05
SNRNP40-202ENST00000373720 KCNE2Q9Y6J6 123 aa8.52□□□□□ -1.05
SNRNP40-202ENST00000373720 NCF1BA6NI72 391 aaPredicted RBP8.51□□□□□ -1.05
SNRNP40-202ENST00000373720 C16orf96A6NNT2 1141 aa8.51□□□□□ -1.05
SNRNP40-202ENST00000373720 HIDE1A8MVS5 230 aa8.51□□□□□ -1.05
SNRNP40-202ENST00000373720 NCF1CA8MVU1 366 aaPredicted RBP8.51□□□□□ -1.05
SNRNP40-202ENST00000373720 FOXE1O00358 373 aaPredicted RBP8.51□□□□□ -1.05
SNRNP40-202ENST00000373720 MANBAO00462 879 aa8.51□□□□□ -1.05
SNRNP40-202ENST00000373720 ANKRD28O15084 1053 aa8.51□□□□□ -1.05
SNRNP40-202ENST00000373720 TSPAN6O43657 245 aa8.51□□□□□ -1.05
SNRNP40-202ENST00000373720 SGTAO43765 313 aa8.51□□□□□ -1.05
SNRNP40-202ENST00000373720 KDM1AO60341 852 aa8.51□□□□□ -1.05
SNRNP40-202ENST00000373720 LEFTY1O75610 366 aa8.51□□□□□ -1.05
SNRNP40-202ENST00000373720 PRAMEF12O95522 483 aa8.51□□□□□ -1.05
SNRNP40-202ENST00000373720 LYNP07948 512 aa8.51□□□□□ -1.05
SNRNP40-202ENST00000373720 RETP07949 1114 aa8.51□□□□□ -1.05
SNRNP40-202ENST00000373720 F7P08709 466 aaPredicted RBP8.51□□□□□ -1.05
SNRNP40-202ENST00000373720 PRSS56P0CW18 603 aa8.51□□□□□ -1.05
SNRNP40-202ENST00000373720 NCF1P14598 390 aaPredicted RBP8.51□□□□□ -1.05
SNRNP40-202ENST00000373720 UGT1A6P19224 532 aa8.51□□□□□ -1.05
SNRNP40-202ENST00000373720 CAPN3P20807 821 aa8.51□□□□□ -1.05
SNRNP40-202ENST00000373720 UGT1A1P22309 533 aa8.51□□□□□ -1.05
SNRNP40-202ENST00000373720 UGT1A4P22310 534 aa8.51□□□□□ -1.05
SNRNP40-202ENST00000373720 LHCGRP22888 699 aa8.51□□□□□ -1.05
SNRNP40-202ENST00000373720 CXCR2P25025 360 aa8.51□□□□□ -1.05
SNRNP40-202ENST00000373720 GSTM2P28161 218 aa8.51□□□□□ -1.05
SNRNP40-202ENST00000373720 UGT1A3P35503 534 aa8.51□□□□□ -1.05
SNRNP40-202ENST00000373720 UGT1A5P35504 534 aa8.51□□□□□ -1.05
SNRNP40-202ENST00000373720 ARL1P40616 181 aaPredicted RBP8.51□□□□□ -1.05
SNRNP40-202ENST00000373720 CCR2P41597 374 aa8.51□□□□□ -1.05
SNRNP40-202ENST00000373720 ARFIP1P53367 373 aa8.51□□□□□ -1.05
SNRNP40-202ENST00000373720 FOXA1P55317 472 aa8.51□□□□□ -1.05
SNRNP40-202ENST00000373720 MRPS22P82650 360 aaKnown RBP8.51□□□□□ -1.05
SNRNP40-202ENST00000373720 TXNL4AP83876 142 aaKnown RBP8.51□□□□□ -1.05
SNRNP40-202ENST00000373720 CTBSQ01459 385 aa8.51□□□□□ -1.05
SNRNP40-202ENST00000373720 FOLH1Q04609 750 aa8.51□□□□□ -1.05
SNRNP40-202ENST00000373720 ELOAQ14241 798 aaKnown RBP8.51□□□□□ -1.05
SNRNP40-202ENST00000373720 GK3PQ14409 553 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms