RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 ANXA8P13928 327 aa15.02□□□□□ -0.01
COL5A1-201ENST00000371817 GTF2F2P13984 249 aa15.02□□□□□ -0.01
COL5A1-201ENST00000371817 RAB4AP20338 218 aa15.02□□□□□ -0.01
COL5A1-201ENST00000371817 DLSTP36957 453 aa15.02□□□□□ -0.01
COL5A1-201ENST00000371817 ERVK-8P63133 956 aa15.02□□□□□ -0.01
COL5A1-201ENST00000371817 GPR139Q6DWJ6 353 aa15.02□□□□□ -0.01
COL5A1-201ENST00000371817 ANKRD46Q86W74 232 aa15.02□□□□□ -0.01
COL5A1-201ENST00000371817 RASGEF1CQ8N431 466 aa15.02□□□□□ -0.01
COL5A1-201ENST00000371817 C3orf49Q96BT1 292 aa15.02□□□□□ -0.01
COL5A1-201ENST00000371817 MFSD14AQ96MC6 490 aa15.02□□□□□ -0.01
COL5A1-201ENST00000371817 INPP4AQ96PE3 977 aaPredicted RBP15.02□□□□□ -0.01
COL5A1-201ENST00000371817 NDC1Q9BTX1 674 aa15.02□□□□□ -0.01
COL5A1-201ENST00000371817 PPA2Q9H2U2 334 aa15.02□□□□□ -0.01
COL5A1-201ENST00000371817 CEP170Q5SW79 1584 aa15.02□□□□□ -0.01
COL5A1-201ENST00000371817 SEPT4O43236 478 aa15.01□□□□□ -0.01
COL5A1-201ENST00000371817 CREBL2O60519 120 aaPredicted RBP15.01□□□□□ -0.01
COL5A1-201ENST00000371817 GNAZP19086 355 aa15.01□□□□□ -0.01
COL5A1-201ENST00000371817 SLC30A10Q6XR72 485 aa15.01□□□□□ -0.01
COL5A1-201ENST00000371817 COQ3Q9NZJ6 369 aa15.01□□□□□ -0.01
COL5A1-201ENST00000371817 ZNF705FA8MVS1 300 aaPredicted RBP15.01□□□□□ -0.01
COL5A1-201ENST00000371817 HSPA12AO43301 675 aa15.01□□□□□ -0.01
COL5A1-201ENST00000371817 UBXN7O94888 489 aa15.01□□□□□ -0.01
COL5A1-201ENST00000371817 ZNF705DP0CH99 300 aaPredicted RBP15.01□□□□□ -0.01
COL5A1-201ENST00000371817 ZNF705BP0CI00 300 aaPredicted RBP15.01□□□□□ -0.01
COL5A1-201ENST00000371817 DDX6P26196 483 aaKnown RBP eCLIP15.01□□□□□ -0.01
COL5A1-201ENST00000371817 GNMTQ14749 295 aa15.01□□□□□ -0.01
COL5A1-201ENST00000371817 FAM174BQ3ZCQ3 159 aa15.01□□□□□ -0.01
COL5A1-201ENST00000371817 FAM46CQ5VWP2 391 aa15.01□□□□□ -0.01
COL5A1-201ENST00000371817 BBS12Q6ZW61 710 aa15.01□□□□□ -0.01
COL5A1-201ENST00000371817 SLC35C1Q96A29 364 aa15.01□□□□□ -0.01
COL5A1-201ENST00000371817 TMEM68Q96MH6 324 aa15.01□□□□□ -0.01
COL5A1-201ENST00000371817 C2orf49Q9BVC5 232 aaPredicted RBP15.01□□□□□ -0.01
COL5A1-201ENST00000371817 ABCC13Q9NSE7 274 aa15.01□□□□□ -0.01
COL5A1-201ENST00000371817 C17orf102A2RUQ5 167 aa15.01□□□□□ -0.01
COL5A1-201ENST00000371817 IFNA1P01562 189 aa15.01□□□□□ -0.01
COL5A1-201ENST00000371817 PABPC4LP0CB38 370 aaKnown RBP15.01□□□□□ -0.01
COL5A1-201ENST00000371817 TRIM23P36406 574 aa15.01□□□□□ -0.01
COL5A1-201ENST00000371817 MAPK8P45983 427 aa15.01□□□□□ -0.01
COL5A1-201ENST00000371817 MARSP56192 900 aaKnown RBP15.01□□□□□ -0.01
COL5A1-201ENST00000371817 PITRM1Q5JRX3 1037 aa15.01□□□□□ -0.01
COL5A1-201ENST00000371817 FAM83HQ6ZRV2 1179 aaPredicted RBP15.01□□□□□ -0.01
COL5A1-201ENST00000371817 C1orf186Q6ZWK4 172 aa15.01□□□□□ -0.01
COL5A1-201ENST00000371817 MARCH9Q86YJ5 346 aa15.01□□□□□ -0.01
COL5A1-201ENST00000371817 NECAB3Q96P71 396 aaPredicted RBP15.01□□□□□ -0.01
COL5A1-201ENST00000371817 ITM2AO43736 263 aa15.01□□□□□ -0.01
COL5A1-201ENST00000371817 ZNF182P17025 639 aaPredicted RBP15.01□□□□□ -0.01
COL5A1-201ENST00000371817 TMEM126BQ8IUX1 230 aa15.01□□□□□ -0.01
COL5A1-201ENST00000371817 C10orf82Q8WW14 230 aa15.01□□□□□ -0.01
COL5A1-201ENST00000371817 DDX4Q9NQI0 724 aaKnown RBP15.01□□□□□ -0.01
COL5A1-201ENST00000371817 RASGRP1O95267 797 aa15.01□□□□□ -0.01
COL5A1-201ENST00000371817 CLCN4P51793 760 aa15.01□□□□□ -0.01
COL5A1-201ENST00000371817 SH3PXD2AQ5TCZ1 1133 aa15.01□□□□□ -0.01
COL5A1-201ENST00000371817 LIN28AQ9H9Z2 209 aaKnown RBP15.01□□□□□ -0.01
COL5A1-201ENST00000371817 SNCAIPQ9Y6H5 919 aa15.01□□□□□ -0.01
COL5A1-201ENST00000371817 WDPCPO95876 746 aa15.01□□□□□ -0.01
COL5A1-201ENST00000371817 SNRPD1P62314 119 aaKnown RBP15.01□□□□□ -0.01
COL5A1-201ENST00000371817 CRB2Q5IJ48 1285 aa15.01□□□□□ -0.01
COL5A1-201ENST00000371817 IFNL1Q8IU54 200 aa15.01□□□□□ -0.01
COL5A1-201ENST00000371817 DNAJB8Q8NHS0 232 aa15.01□□□□□ -0.01
COL5A1-201ENST00000371817 NCSTNQ92542 709 aa15.01□□□□□ -0.01
COL5A1-201ENST00000371817 SLC41A3Q96GZ6 507 aa15.01□□□□□ -0.01
COL5A1-201ENST00000371817 CDH10Q9Y6N8 788 aa15.01□□□□□ -0.01
COL5A1-201ENST00000371817 K7EPI3 171 aa15.01□□□□□ -0.01
COL5A1-201ENST00000371817 FAM155BO75949 473 aa15.01□□□□□ -0.01
COL5A1-201ENST00000371817 C22orf31O95567 290 aa15.01□□□□□ -0.01
COL5A1-201ENST00000371817 PAHP00439 452 aa15.01□□□□□ -0.01
COL5A1-201ENST00000371817 CALCAP01258 141 aa15.01□□□□□ -0.01
COL5A1-201ENST00000371817 ZNF616Q08AN1 781 aa15.01□□□□□ -0.01
COL5A1-201ENST00000371817 MAD2L1BPQ15013 274 aaPredicted RBP15.01□□□□□ -0.01
COL5A1-201ENST00000371817 FBXL19Q6PCT2 694 aa15.01□□□□□ -0.01
COL5A1-201ENST00000371817 TMPRSS11BQ86T26 416 aa15.01□□□□□ -0.01
COL5A1-201ENST00000371817 TRUB1Q8WWH5 349 aaKnown RBP15.01□□□□□ -0.01
COL5A1-201ENST00000371817 TMEM209Q96SK2 561 aa15.01□□□□□ -0.01
COL5A1-201ENST00000371817 PCDHAC1Q9H158 963 aa15.01□□□□□ -0.01
COL5A1-201ENST00000371817 TCAF2A6NFQ2 919 aa15□□□□□ -0.01
COL5A1-201ENST00000371817 SLC19A2O60779 497 aa15□□□□□ -0.01
COL5A1-201ENST00000371817 ICAM1P05362 532 aa15□□□□□ -0.01
COL5A1-201ENST00000371817 ZNF823P16415 610 aa15□□□□□ -0.01
COL5A1-201ENST00000371817 XRCC1P18887 633 aaPredicted RBP15□□□□□ -0.01
COL5A1-201ENST00000371817 CAPN3P20807 821 aa15□□□□□ -0.01
COL5A1-201ENST00000371817 PLEKHG7Q6ZR37 379 aa15□□□□□ -0.01
COL5A1-201ENST00000371817 SLC26A9Q7LBE3 791 aa15□□□□□ -0.01
COL5A1-201ENST00000371817 SH3RF1Q7Z6J0 888 aa15□□□□□ -0.01
COL5A1-201ENST00000371817 TDRPQ86YL5 185 aa15□□□□□ -0.01
COL5A1-201ENST00000371817 CLEC10AQ8IUN9 316 aa15□□□□□ -0.01
COL5A1-201ENST00000371817 ACSL5Q9ULC5 683 aa15□□□□□ -0.01
COL5A1-201ENST00000371817 A8MVJ9 347 aa15□□□□□ -0.01
COL5A1-201ENST00000371817 VTNP04004 478 aa15□□□□□ -0.01
COL5A1-201ENST00000371817 FGF1P05230 155 aa15□□□□□ -0.01
COL5A1-201ENST00000371817 LCP2Q13094 533 aa15□□□□□ -0.01
COL5A1-201ENST00000371817 NTRK3Q16288 839 aa15□□□□□ -0.01
COL5A1-201ENST00000371817 CAND1Q86VP6 1230 aaKnown RBP15□□□□□ -0.01
COL5A1-201ENST00000371817 AMBNQ9NP70 447 aa15□□□□□ -0.01
COL5A1-201ENST00000371817 C2orf92A0A1B0GVN3 265 aa15□□□□□ -0.01
COL5A1-201ENST00000371817 ZNF705GA8MUZ8 300 aaPredicted RBP15□□□□□ -0.01
COL5A1-201ENST00000371817 SUPT20HL2P0C7V6 817 aa15□□□□□ -0.01
COL5A1-201ENST00000371817 ZNF20P17024 532 aa15□□□□□ -0.01
COL5A1-201ENST00000371817 PRKD1Q15139 912 aaPredicted RBP15□□□□□ -0.01
COL5A1-201ENST00000371817 EXOC3L2Q2M3D2 409 aa15□□□□□ -0.01
COL5A1-201ENST00000371817 PAN2Q504Q3 1202 aaKnown RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms