RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 PRKACBP22694 351 aa6.88□□□□□ -1.31
USP1-202ENST00000371146 GRK6P43250 576 aa6.88□□□□□ -1.31
USP1-202ENST00000371146 CDH13P55290 713 aa6.88□□□□□ -1.31
USP1-202ENST00000371146 FOXL2P58012 376 aa6.88□□□□□ -1.31
USP1-202ENST00000371146 ZBTB16Q05516 673 aa6.88□□□□□ -1.31
USP1-202ENST00000371146 LSAMPQ13449 338 aa6.88□□□□□ -1.31
USP1-202ENST00000371146 SLC29A2Q14542 456 aa6.88□□□□□ -1.31
USP1-202ENST00000371146 TGIF1Q15583 401 aa6.88□□□□□ -1.31
USP1-202ENST00000371146 KLHL38Q2WGJ6 581 aa6.88□□□□□ -1.31
USP1-202ENST00000371146 PTCHD3Q3KNS1 767 aa6.88□□□□□ -1.31
USP1-202ENST00000371146 ANKRD20A4Q4UJ75 823 aa6.88□□□□□ -1.31
USP1-202ENST00000371146 LAIR1Q6GTX8 287 aa6.88□□□□□ -1.31
USP1-202ENST00000371146 KLC3Q6P597 504 aa6.88□□□□□ -1.31
USP1-202ENST00000371146 ZNF438Q7Z4V0 828 aa6.88□□□□□ -1.31
USP1-202ENST00000371146 PIH1D2Q8WWB5 315 aa6.88□□□□□ -1.31
USP1-202ENST00000371146 APOLD1Q96LR9 279 aa6.88□□□□□ -1.31
USP1-202ENST00000371146 VCXQ9H320 206 aa6.88□□□□□ -1.31
USP1-202ENST00000371146 ALG9Q9H6U8 611 aa6.88□□□□□ -1.31
USP1-202ENST00000371146 C12orf10Q9HB07 376 aa6.88□□□□□ -1.31
USP1-202ENST00000371146 XAB2Q9HCS7 855 aaKnown RBP6.88□□□□□ -1.31
USP1-202ENST00000371146 CRNNQ9UBG3 495 aaPredicted RBP6.88□□□□□ -1.31
USP1-202ENST00000371146 PCDHB11Q9Y5F2 797 aa6.88□□□□□ -1.31
USP1-202ENST00000371146 PKD1L2Q7Z442 2459 aa6.88□□□□□ -1.31
USP1-202ENST00000371146 FRYQ5TBA9 3013 aa6.88□□□□□ -1.31
USP1-202ENST00000371146 IGLV3-10A0A075B6K4 115 aa6.88□□□□□ -1.31
USP1-202ENST00000371146 A0A1W2PRQ8 180 aa6.88□□□□□ -1.31
USP1-202ENST00000371146 KLK10O43240 276 aa6.88□□□□□ -1.31
USP1-202ENST00000371146 PSMD3O43242 534 aa6.88□□□□□ -1.31
USP1-202ENST00000371146 WNT1P04628 370 aa6.88□□□□□ -1.31
USP1-202ENST00000371146 C1SP09871 688 aa6.88□□□□□ -1.31
USP1-202ENST00000371146 CPA3P15088 417 aa6.88□□□□□ -1.31
USP1-202ENST00000371146 AP2B1P63010 937 aa6.88□□□□□ -1.31
USP1-202ENST00000371146 ELF3P78545 371 aaPredicted RBP6.88□□□□□ -1.31
USP1-202ENST00000371146 TARDBPQ13148 414 aaKnown RBP eCLIP6.88□□□□□ -1.31
USP1-202ENST00000371146 ADRM1Q16186 407 aa6.88□□□□□ -1.31
USP1-202ENST00000371146 ALG11Q2TAA5 492 aa6.88□□□□□ -1.31
USP1-202ENST00000371146 INAVAQ3KP66 663 aa6.88□□□□□ -1.31
USP1-202ENST00000371146 ANKDD1AQ495B1 522 aa6.88□□□□□ -1.31
USP1-202ENST00000371146 MSS51Q4VC12 460 aa6.88□□□□□ -1.31
USP1-202ENST00000371146 LGSNQ5TDP6 509 aa6.88□□□□□ -1.31
USP1-202ENST00000371146 CACHD1Q5VU97 1274 aa6.88□□□□□ -1.31
USP1-202ENST00000371146 FAM69BQ5VUD6 431 aa6.88□□□□□ -1.31
USP1-202ENST00000371146 ANGPTL8Q6UXH0 198 aa6.88□□□□□ -1.31
USP1-202ENST00000371146 RAB42Q8N4Z0 105 aa6.88□□□□□ -1.31
USP1-202ENST00000371146 KCT2Q8NC54 265 aa6.88□□□□□ -1.31
USP1-202ENST00000371146 TMIEQ8NEW7 156 aa6.88□□□□□ -1.31
USP1-202ENST00000371146 EPS8L3Q8TE67 593 aaKnown RBP6.88□□□□□ -1.31
USP1-202ENST00000371146 RAB7BQ96AH8 199 aa6.88□□□□□ -1.31
USP1-202ENST00000371146 LINGO1Q96FE5 620 aa6.88□□□□□ -1.31
USP1-202ENST00000371146 MED30Q96HR3 178 aa6.88□□□□□ -1.31
USP1-202ENST00000371146 MGME1Q9BQP7 344 aa6.88□□□□□ -1.31
USP1-202ENST00000371146 CCDC28BQ9BUN5 200 aa6.88□□□□□ -1.31
USP1-202ENST00000371146 SCNM1Q9BWG6 230 aa6.88□□□□□ -1.31
USP1-202ENST00000371146 TXLNGQ9NUQ3 528 aa6.88□□□□□ -1.31
USP1-202ENST00000371146 EURLQ9NYK6 297 aa6.88□□□□□ -1.31
USP1-202ENST00000371146 APOBEC2Q9Y235 224 aaKnown RBP6.88□□□□□ -1.31
USP1-202ENST00000371146 COMMD3-BMI1R4GMX3 469 aa6.88□□□□□ -1.31
USP1-202ENST00000371146 A8MUI8 341 aa6.88□□□□□ -1.31
USP1-202ENST00000371146 SAP18O00422 153 aaKnown RBP6.88□□□□□ -1.31
USP1-202ENST00000371146 TRIM38O00635 465 aa6.88□□□□□ -1.31
USP1-202ENST00000371146 DNALI1O14645 258 aaPredicted RBP6.88□□□□□ -1.31
USP1-202ENST00000371146 RGS16O15492 202 aaPredicted RBP6.88□□□□□ -1.31
USP1-202ENST00000371146 SUPT7LO94864 414 aa6.88□□□□□ -1.31
USP1-202ENST00000371146 IGHV4-34P06331 123 aa6.88□□□□□ -1.31
USP1-202ENST00000371146 FAM153BP0C7A2 387 aa6.88□□□□□ -1.31
USP1-202ENST00000371146 CCND1P24385 295 aa6.88□□□□□ -1.31
USP1-202ENST00000371146 RPS9P46781 194 aaKnown RBP6.88□□□□□ -1.31
USP1-202ENST00000371146 GRIA4P48058 902 aa6.88□□□□□ -1.31
USP1-202ENST00000371146 RBBP7Q16576 425 aa6.88□□□□□ -1.31
USP1-202ENST00000371146 TTLL9Q3SXZ7 439 aa6.88□□□□□ -1.31
USP1-202ENST00000371146 FAM153CQ494X1 144 aa6.88□□□□□ -1.31
USP1-202ENST00000371146 RBM20Q5T481 1227 aaKnown RBP6.88□□□□□ -1.31
USP1-202ENST00000371146 C10orf62Q5T681 223 aaPredicted RBP6.88□□□□□ -1.31
USP1-202ENST00000371146 TSTD2Q5T7W7 516 aa6.88□□□□□ -1.31
USP1-202ENST00000371146 SIGIRRQ6IA17 410 aa6.88□□□□□ -1.31
USP1-202ENST00000371146 KIAA1161Q6NSJ0 714 aa6.88□□□□□ -1.31
USP1-202ENST00000371146 RPS27LQ71UM5 84 aaKnown RBP6.88□□□□□ -1.31
USP1-202ENST00000371146 SCUBE1Q8IWY4 988 aa6.88□□□□□ -1.31
USP1-202ENST00000371146 CASKIN2Q8WXE0 1202 aa6.88□□□□□ -1.31
USP1-202ENST00000371146 VPS50Q96JG6 964 aa6.88□□□□□ -1.31
USP1-202ENST00000371146 EGLN2Q96KS0 407 aa6.88□□□□□ -1.31
USP1-202ENST00000371146 NSMCE3Q96MG7 304 aa6.88□□□□□ -1.31
USP1-202ENST00000371146 FAM129AQ9BZQ8 928 aa6.88□□□□□ -1.31
USP1-202ENST00000371146 CEP44Q9C0F1 390 aa6.88□□□□□ -1.31
USP1-202ENST00000371146 IL22Q9GZX6 179 aa6.88□□□□□ -1.31
USP1-202ENST00000371146 PDP2Q9P2J9 529 aa6.88□□□□□ -1.31
USP1-202ENST00000371146 MARCOQ9UEW3 520 aaPredicted RBP6.88□□□□□ -1.31
USP1-202ENST00000371146 TBC1D29Q9UFV1 150 aa6.88□□□□□ -1.31
USP1-202ENST00000371146 SLC23A2Q9UGH3 650 aa6.88□□□□□ -1.31
USP1-202ENST00000371146 FBXO4Q9UKT5 387 aa6.88□□□□□ -1.31
USP1-202ENST00000371146 RNF112Q9ULX5 631 aa6.88□□□□□ -1.31
USP1-202ENST00000371146 KIF26BQ2KJY2 2108 aa6.88□□□□□ -1.31
USP1-202ENST00000371146 TEX51A0A1B0GUA7 166 aa6.87□□□□□ -1.31
USP1-202ENST00000371146 CAPN8A6NHC0 703 aa6.87□□□□□ -1.31
USP1-202ENST00000371146 FADS2P1A8MWK0 482 aa6.87□□□□□ -1.31
USP1-202ENST00000371146 NPC1O15118 1278 aa6.87□□□□□ -1.31
USP1-202ENST00000371146 NVLO15381 856 aaKnown RBP6.87□□□□□ -1.31
USP1-202ENST00000371146 MYZAPP0CAP1 466 aa6.87□□□□□ -1.31
USP1-202ENST00000371146 MMP12P39900 470 aa6.87□□□□□ -1.31
USP1-202ENST00000371146 VSNL1P62760 191 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms