RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 PDCD10Q9BUL8 212 aa19.29■□□□□ 0.68
LMO4-202ENST00000370544 CNPPD1Q9BV87 410 aa19.29■□□□□ 0.68
LMO4-202ENST00000370544 MCUBQ9NWR8 336 aa19.29■□□□□ 0.68
LMO4-202ENST00000370544 MCM8Q9UJA3 840 aa19.29■□□□□ 0.68
LMO4-202ENST00000370544 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP19.29■□□□□ 0.68
LMO4-202ENST00000370544 SIX3O95343 332 aaPredicted RBP19.29■□□□□ 0.68
LMO4-202ENST00000370544 ACP5P13686 325 aa19.29■□□□□ 0.68
LMO4-202ENST00000370544 CCR8P51685 355 aa19.29■□□□□ 0.68
LMO4-202ENST00000370544 SLC13A2Q13183 592 aa19.29■□□□□ 0.68
LMO4-202ENST00000370544 C2orf27AQ580R0 203 aa19.29■□□□□ 0.68
LMO4-202ENST00000370544 PYCR2Q96C36 320 aa19.29■□□□□ 0.68
LMO4-202ENST00000370544 TMEM59LQ9UK28 342 aa19.29■□□□□ 0.68
LMO4-202ENST00000370544 LOC110117498-PIK3R3F6TDL0 507 aa19.29■□□□□ 0.68
LMO4-202ENST00000370544 MYCLP1P12525 358 aaPredicted RBP19.29■□□□□ 0.68
LMO4-202ENST00000370544 RYKP34925 604 aa19.29■□□□□ 0.68
LMO4-202ENST00000370544 ARFIP1P53367 373 aa19.29■□□□□ 0.68
LMO4-202ENST00000370544 GPX6P59796 221 aa19.29■□□□□ 0.68
LMO4-202ENST00000370544 PCDH1Q08174 1060 aa19.29■□□□□ 0.68
LMO4-202ENST00000370544 Q6ZVU0 165 aa19.29■□□□□ 0.68
LMO4-202ENST00000370544 CCM2Q9BSQ5 444 aa19.29■□□□□ 0.68
LMO4-202ENST00000370544 USP29Q9HBJ7 922 aa19.29■□□□□ 0.68
LMO4-202ENST00000370544 ZNF222Q9UK12 451 aa19.29■□□□□ 0.68
LMO4-202ENST00000370544 MAGEB3O15480 346 aa19.29■□□□□ 0.68
LMO4-202ENST00000370544 KDELR3O43731 214 aa19.29■□□□□ 0.68
LMO4-202ENST00000370544 MTX2O75431 263 aa19.29■□□□□ 0.68
LMO4-202ENST00000370544 KLF1Q13351 362 aaPredicted RBP19.29■□□□□ 0.68
LMO4-202ENST00000370544 MYLK3Q32MK0 819 aa19.29■□□□□ 0.68
LMO4-202ENST00000370544 BTN2A1Q7KYR7 527 aa19.29■□□□□ 0.68
LMO4-202ENST00000370544 LRRC70Q7Z2Q7 622 aa19.29■□□□□ 0.68
LMO4-202ENST00000370544 ZZZ3Q8IYH5 903 aa19.29■□□□□ 0.68
LMO4-202ENST00000370544 NPY6RQ99463 290 aa19.29■□□□□ 0.68
LMO4-202ENST00000370544 TLL2Q9Y6L7 1015 aa19.29■□□□□ 0.68
LMO4-202ENST00000370544 GDI1P31150 447 aa19.28■□□□□ 0.68
LMO4-202ENST00000370544 SLBPQ14493 270 aaKnown RBP eCLIP19.28■□□□□ 0.68
LMO4-202ENST00000370544 HERC3Q15034 1050 aa19.28■□□□□ 0.68
LMO4-202ENST00000370544 MBOAT1Q6ZNC8 495 aa19.28■□□□□ 0.68
LMO4-202ENST00000370544 CTU1Q7Z7A3 348 aaKnown RBP19.28■□□□□ 0.68
LMO4-202ENST00000370544 ZC3HC1Q86WB0 502 aaKnown RBP19.28■□□□□ 0.68
LMO4-202ENST00000370544 NRSN1Q8IZ57 195 aa19.28■□□□□ 0.68
LMO4-202ENST00000370544 TMEM209Q96SK2 561 aa19.28■□□□□ 0.68
LMO4-202ENST00000370544 C11orf16Q9NQ32 467 aa19.28■□□□□ 0.68
LMO4-202ENST00000370544 MTMR11A4FU01 709 aa19.28■□□□□ 0.68
LMO4-202ENST00000370544 C9P02748 559 aa19.28■□□□□ 0.68
LMO4-202ENST00000370544 RAP2AP10114 183 aa19.28■□□□□ 0.68
LMO4-202ENST00000370544 PTX3P26022 381 aaPredicted RBP19.28■□□□□ 0.68
LMO4-202ENST00000370544 COX18Q8N8Q8 333 aa19.28■□□□□ 0.68
LMO4-202ENST00000370544 TTLQ8NG68 377 aa19.28■□□□□ 0.68
LMO4-202ENST00000370544 GPATCH1Q9BRR8 931 aaKnown RBP19.28■□□□□ 0.68
LMO4-202ENST00000370544 CARS2Q9HA77 564 aaKnown RBP19.28■□□□□ 0.68
LMO4-202ENST00000370544 IRAK3Q9Y616 596 aa19.28■□□□□ 0.68
LMO4-202ENST00000370544 PIRO00625 290 aa19.28■□□□□ 0.68
LMO4-202ENST00000370544 POU2F1P14859 743 aa19.28■□□□□ 0.68
LMO4-202ENST00000370544 MASP1P48740 699 aa19.28■□□□□ 0.68
LMO4-202ENST00000370544 ZC3H3Q8IXZ2 948 aaKnown RBP19.28■□□□□ 0.68
LMO4-202ENST00000370544 SHISA4Q96DD7 197 aa19.28■□□□□ 0.68
LMO4-202ENST00000370544 GMLQ99445 158 aa19.28■□□□□ 0.68
LMO4-202ENST00000370544 ITM2CQ9NQX7 267 aa19.28■□□□□ 0.68
LMO4-202ENST00000370544 CKLFQ9UBR5 152 aa19.28■□□□□ 0.68
LMO4-202ENST00000370544 RGPD8O14715 1765 aaPredicted RBP19.28■□□□□ 0.68
LMO4-202ENST00000370544 GADD45GO95257 159 aa19.28■□□□□ 0.68
LMO4-202ENST00000370544 LYNP07948 512 aa19.28■□□□□ 0.68
LMO4-202ENST00000370544 ATP1B2P14415 290 aaPredicted RBP19.28■□□□□ 0.68
LMO4-202ENST00000370544 IL12BP29460 328 aa19.28■□□□□ 0.68
LMO4-202ENST00000370544 ACTR1BP42025 376 aa19.28■□□□□ 0.68
LMO4-202ENST00000370544 NCBP2P52298 156 aaKnown RBP eCLIP19.28■□□□□ 0.68
LMO4-202ENST00000370544 ACTR1AP61163 376 aa19.28■□□□□ 0.68
LMO4-202ENST00000370544 ADGRE1Q14246 886 aa19.28■□□□□ 0.68
LMO4-202ENST00000370544 TMEM198Q66K66 360 aa19.28■□□□□ 0.68
LMO4-202ENST00000370544 CXorf57Q6NSI4 855 aaKnown RBP19.28■□□□□ 0.68
LMO4-202ENST00000370544 TMEM214Q6NUQ4 689 aaKnown RBP19.28■□□□□ 0.68
LMO4-202ENST00000370544 FBXO15Q8NCQ5 510 aaPredicted RBP19.28■□□□□ 0.68
LMO4-202ENST00000370544 ATP6V1C2Q8NEY4 427 aa19.28■□□□□ 0.68
LMO4-202ENST00000370544 ZNF570Q96NI8 536 aa19.28■□□□□ 0.68
LMO4-202ENST00000370544 CHID1Q9BWS9 393 aa19.28■□□□□ 0.68
LMO4-202ENST00000370544 CRTAC1Q9NQ79 661 aa19.28■□□□□ 0.68
LMO4-202ENST00000370544 TMEM248Q9NWD8 314 aa19.28■□□□□ 0.68
LMO4-202ENST00000370544 OAS3Q9Y6K5 1087 aaKnown RBP19.28■□□□□ 0.68
LMO4-202ENST00000370544 IQCMA0A1B0GVH7 501 aa19.27■□□□□ 0.68
LMO4-202ENST00000370544 LRRC32Q14392 662 aa19.27■□□□□ 0.68
LMO4-202ENST00000370544 UBXN2BQ14CS0 331 aa19.27■□□□□ 0.68
LMO4-202ENST00000370544 ENPP7Q6UWV6 458 aa19.27■□□□□ 0.68
LMO4-202ENST00000370544 GLIS1Q8NBF1 620 aa19.27■□□□□ 0.68
LMO4-202ENST00000370544 ELOVL2Q9NXB9 296 aa19.27■□□□□ 0.68
LMO4-202ENST00000370544 COPS7AQ9UBW8 275 aa19.27■□□□□ 0.68
LMO4-202ENST00000370544 TEX264Q9Y6I9 313 aa19.27■□□□□ 0.68
LMO4-202ENST00000370544 ANKRD66B4E2M5 251 aa19.27■□□□□ 0.68
LMO4-202ENST00000370544 CLDN7O95471 211 aa19.27■□□□□ 0.68
LMO4-202ENST00000370544 AHSGP02765 367 aa19.27■□□□□ 0.68
LMO4-202ENST00000370544 VARSP26640 1264 aaKnown RBP19.27■□□□□ 0.68
LMO4-202ENST00000370544 ROR2Q01974 943 aaKnown RBP19.27■□□□□ 0.68
LMO4-202ENST00000370544 PIM3Q86V86 326 aa19.27■□□□□ 0.68
LMO4-202ENST00000370544 DDX1Q92499 740 aaKnown RBP19.27■□□□□ 0.68
LMO4-202ENST00000370544 PCYT2Q99447 389 aa19.27■□□□□ 0.68
LMO4-202ENST00000370544 EFCAB11Q9BUY7 163 aa19.27■□□□□ 0.68
LMO4-202ENST00000370544 LRRC3Q9BY71 257 aa19.27■□□□□ 0.68
LMO4-202ENST00000370544 A0A1W2PRB8 838 aa19.27■□□□□ 0.68
LMO4-202ENST00000370544 H3BNX3 289 aa19.27■□□□□ 0.68
LMO4-202ENST00000370544 TPST2O60704 377 aa19.27■□□□□ 0.68
LMO4-202ENST00000370544 KLHL24Q6TFL4 600 aa19.27■□□□□ 0.68
LMO4-202ENST00000370544 NUDT13Q86X67 352 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms