RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 RAB42Q8N4Z0 105 aa14.41□□□□□ -0.1
COL9A1-204ENST00000370496 MAGEC3Q8TD91 643 aa14.41□□□□□ -0.1
COL9A1-204ENST00000370496 LINGO1Q96FE5 620 aa14.41□□□□□ -0.1
COL9A1-204ENST00000370496 RBBP8Q99708 897 aa14.41□□□□□ -0.1
COL9A1-204ENST00000370496 CMKLR1Q99788 373 aa14.41□□□□□ -0.1
COL9A1-204ENST00000370496 NRSN2Q9GZP1 204 aa14.41□□□□□ -0.1
COL9A1-204ENST00000370496 TFB2MQ9H5Q4 396 aaKnown RBP14.41□□□□□ -0.1
COL9A1-204ENST00000370496 CIDEBQ9UHD4 219 aa14.41□□□□□ -0.1
COL9A1-204ENST00000370496 VWA7Q9Y334 891 aa14.41□□□□□ -0.1
COL9A1-204ENST00000370496 AK5Q9Y6K8 562 aa14.41□□□□□ -0.1
COL9A1-204ENST00000370496 ADAMTS20P59510 1910 aa14.41□□□□□ -0.1
COL9A1-204ENST00000370496 CEP295Q9C0D2 2601 aa14.4□□□□□ -0.1
COL9A1-204ENST00000370496 TRABD2BA6NFA1 517 aa14.4□□□□□ -0.1
COL9A1-204ENST00000370496 BTN3A1O00481 513 aa14.4□□□□□ -0.1
COL9A1-204ENST00000370496 PLD2O14939 933 aa14.4□□□□□ -0.1
COL9A1-204ENST00000370496 HGSO14964 777 aaPredicted RBP14.4□□□□□ -0.1
COL9A1-204ENST00000370496 C9P02748 559 aa14.4□□□□□ -0.1
COL9A1-204ENST00000370496 CATP04040 527 aaKnown RBP14.4□□□□□ -0.1
COL9A1-204ENST00000370496 MPC1LP0DKB6 136 aa14.4□□□□□ -0.1
COL9A1-204ENST00000370496 POLR2CP19387 275 aaPredicted RBP14.4□□□□□ -0.1
COL9A1-204ENST00000370496 CSTF2P33240 577 aaKnown RBP eCLIP14.4□□□□□ -0.1
COL9A1-204ENST00000370496 CAMK2BQ13554 666 aa14.4□□□□□ -0.1
COL9A1-204ENST00000370496 C16orf72Q14CZ0 275 aa14.4□□□□□ -0.1
COL9A1-204ENST00000370496 UAP1Q16222 522 aaPredicted RBP14.4□□□□□ -0.1
COL9A1-204ENST00000370496 UNQ6494/PRO21346Q6UXR6 183 aa14.4□□□□□ -0.1
COL9A1-204ENST00000370496 FAM129CQ86XR2 697 aa14.4□□□□□ -0.1
COL9A1-204ENST00000370496 MYO1HQ8N1T3 1032 aa14.4□□□□□ -0.1
COL9A1-204ENST00000370496 FBXO39Q8N4B4 442 aa14.4□□□□□ -0.1
COL9A1-204ENST00000370496 GATA6Q92908 595 aa14.4□□□□□ -0.1
COL9A1-204ENST00000370496 RAD51AP1Q96B01 352 aa14.4□□□□□ -0.1
COL9A1-204ENST00000370496 CYTH2Q99418 400 aa14.4□□□□□ -0.1
COL9A1-204ENST00000370496 CD180Q99467 661 aa14.4□□□□□ -0.1
COL9A1-204ENST00000370496 OLFM1Q99784 485 aa14.4□□□□□ -0.1
COL9A1-204ENST00000370496 RAB11FIP5Q9BXF6 653 aa14.4□□□□□ -0.1
COL9A1-204ENST00000370496 RAB33BQ9H082 229 aa14.4□□□□□ -0.1
COL9A1-204ENST00000370496 ACSS3Q9H6R3 686 aa14.4□□□□□ -0.1
COL9A1-204ENST00000370496 POLR1BQ9H9Y6 1135 aa14.4□□□□□ -0.1
COL9A1-204ENST00000370496 EPHA6Q9UF33 1036 aa14.4□□□□□ -0.1
COL9A1-204ENST00000370496 SLC39A10Q9ULF5 831 aa14.4□□□□□ -0.1
COL9A1-204ENST00000370496 KIF26BQ2KJY2 2108 aa14.4□□□□□ -0.1
COL9A1-204ENST00000370496 PABPN1LA6NDY0 278 aaKnown RBP14.39□□□□□ -0.11
COL9A1-204ENST00000370496 TLCD2A6NGC4 264 aa14.39□□□□□ -0.11
COL9A1-204ENST00000370496 C2orf74A8MZ97 194 aa14.39□□□□□ -0.11
COL9A1-204ENST00000370496 MATN4O95460 622 aa14.39□□□□□ -0.11
COL9A1-204ENST00000370496 C1orf105O95561 183 aa14.39□□□□□ -0.11
COL9A1-204ENST00000370496 C1QAP02745 245 aa14.39□□□□□ -0.11
COL9A1-204ENST00000370496 HGFP14210 728 aa14.39□□□□□ -0.11
COL9A1-204ENST00000370496 CD9P21926 228 aa14.39□□□□□ -0.11
COL9A1-204ENST00000370496 MAP4P27816 1152 aaKnown RBP14.39□□□□□ -0.11
COL9A1-204ENST00000370496 PKLRP30613 574 aa14.39□□□□□ -0.11
COL9A1-204ENST00000370496 SPRP35270 261 aaPredicted RBP14.39□□□□□ -0.11
COL9A1-204ENST00000370496 RAB28P51157 221 aa14.39□□□□□ -0.11
COL9A1-204ENST00000370496 IL2P60568 153 aa14.39□□□□□ -0.11
COL9A1-204ENST00000370496 TUBB4BP68371 445 aa14.39□□□□□ -0.11
COL9A1-204ENST00000370496 TIAL1Q01085 375 aaKnown RBP eCLIP14.39□□□□□ -0.11
COL9A1-204ENST00000370496 UBAP2Q5T6F2 1119 aaKnown RBP14.39□□□□□ -0.11
COL9A1-204ENST00000370496 CACHD1Q5VU97 1274 aa14.39□□□□□ -0.11
COL9A1-204ENST00000370496 PAQR3Q6TCH7 311 aa14.39□□□□□ -0.11
COL9A1-204ENST00000370496 PRSS42Q7Z5A4 293 aa14.39□□□□□ -0.11
COL9A1-204ENST00000370496 SPNS2Q8IVW8 549 aa14.39□□□□□ -0.11
COL9A1-204ENST00000370496 AGBL5Q8NDL9 886 aa14.39□□□□□ -0.11
COL9A1-204ENST00000370496 EEF1AKMT1Q8WVE0 214 aa14.39□□□□□ -0.11
COL9A1-204ENST00000370496 MRRFQ96E11 262 aaKnown RBP14.39□□□□□ -0.11
COL9A1-204ENST00000370496 TSPAN17Q96FV3 270 aa14.39□□□□□ -0.11
COL9A1-204ENST00000370496 NRTNQ99748 197 aa14.39□□□□□ -0.11
COL9A1-204ENST00000370496 PISDQ9UG56 409 aa14.39□□□□□ -0.11
COL9A1-204ENST00000370496 A0A087WUV0 522 aaPredicted RBP14.38□□□□□ -0.11
COL9A1-204ENST00000370496 PMS2P1A4D2B8 440 aa14.38□□□□□ -0.11
COL9A1-204ENST00000370496 ARHGEF33A8MVX0 844 aa14.38□□□□□ -0.11
COL9A1-204ENST00000370496 BTN3A3O00478 584 aa14.38□□□□□ -0.11
COL9A1-204ENST00000370496 RASGRF2O14827 1237 aa14.38□□□□□ -0.11
COL9A1-204ENST00000370496 TOX3O15405 576 aaPredicted RBP14.38□□□□□ -0.11
COL9A1-204ENST00000370496 BRINP1O60477 761 aa14.38□□□□□ -0.11
COL9A1-204ENST00000370496 PSIP1O75475 530 aaKnown RBP14.38□□□□□ -0.11
COL9A1-204ENST00000370496 SYF2O95926 243 aaKnown RBP14.38□□□□□ -0.11
COL9A1-204ENST00000370496 ANKRD34CP0C6C1 535 aa14.38□□□□□ -0.11
COL9A1-204ENST00000370496 ZNF37AP17032 561 aaPredicted RBP14.38□□□□□ -0.11
COL9A1-204ENST00000370496 TNFRSF8P28908 595 aa14.38□□□□□ -0.11
COL9A1-204ENST00000370496 SEPHS1P49903 392 aa14.38□□□□□ -0.11
COL9A1-204ENST00000370496 PGGT1BP53609 377 aa14.38□□□□□ -0.11
COL9A1-204ENST00000370496 PMS2P54278 862 aa14.38□□□□□ -0.11
COL9A1-204ENST00000370496 POU4F1Q01851 419 aa14.38□□□□□ -0.11
COL9A1-204ENST00000370496 ZNF460Q14592 562 aa14.38□□□□□ -0.11
COL9A1-204ENST00000370496 USP10Q14694 798 aaKnown RBP14.38□□□□□ -0.11
COL9A1-204ENST00000370496 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.38□□□□□ -0.11
COL9A1-204ENST00000370496 GRTP1Q5TC63 336 aa14.38□□□□□ -0.11
COL9A1-204ENST00000370496 TRMT10CQ7L0Y3 403 aaKnown RBP14.38□□□□□ -0.11
COL9A1-204ENST00000370496 TAX1BP1Q86VP1 789 aa14.38□□□□□ -0.11
COL9A1-204ENST00000370496 EIF1ADQ8N9N8 165 aaKnown RBP14.38□□□□□ -0.11
COL9A1-204ENST00000370496 IL17FQ96PD4 163 aa14.38□□□□□ -0.11
COL9A1-204ENST00000370496 GPR22Q99680 433 aa14.38□□□□□ -0.11
COL9A1-204ENST00000370496 MCMBPQ9BTE3 642 aa14.38□□□□□ -0.11
COL9A1-204ENST00000370496 ACTR10Q9NZ32 417 aa14.38□□□□□ -0.11
COL9A1-204ENST00000370496 OR6C2Q9NZP2 312 aa14.38□□□□□ -0.11
COL9A1-204ENST00000370496 SPATA7Q9P0W8 599 aa14.38□□□□□ -0.11
COL9A1-204ENST00000370496 PDP2Q9P2J9 529 aa14.38□□□□□ -0.11
COL9A1-204ENST00000370496 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.38□□□□□ -0.11
COL9A1-204ENST00000370496 POMT2Q9UKY4 750 aa14.38□□□□□ -0.11
COL9A1-204ENST00000370496 IKBKGQ9Y6K9 419 aa14.38□□□□□ -0.11
COL9A1-204ENST00000370496 V9GYY5 206 aaPredicted RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms