RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 BNIP3Q12983 259 aa6.74□□□□□ -1.33
CSDE1-204ENST00000369530 SRSF5Q13243 272 aaKnown RBP6.74□□□□□ -1.33
CSDE1-204ENST00000369530 TMEM52BQ4KMG9 183 aa6.74□□□□□ -1.33
CSDE1-204ENST00000369530 INO80DQ53TQ3 878 aaPredicted RBP6.74□□□□□ -1.33
CSDE1-204ENST00000369530 IZUMO3Q5VZ72 239 aa6.74□□□□□ -1.33
CSDE1-204ENST00000369530 DARS2Q6PI48 645 aaKnown RBP6.74□□□□□ -1.33
CSDE1-204ENST00000369530 RCOR2Q8IZ40 523 aa6.74□□□□□ -1.33
CSDE1-204ENST00000369530 DCAF4L2Q8NA75 395 aa6.74□□□□□ -1.33
CSDE1-204ENST00000369530 SLC26A7Q8TE54 656 aa6.74□□□□□ -1.33
CSDE1-204ENST00000369530 RXFP2Q8WXD0 754 aa6.74□□□□□ -1.33
CSDE1-204ENST00000369530 TFAP2CQ92754 450 aa6.74□□□□□ -1.33
CSDE1-204ENST00000369530 FBXL8Q96CD0 374 aa6.74□□□□□ -1.33
CSDE1-204ENST00000369530 C17orf62Q9BQA9 187 aa6.74□□□□□ -1.33
CSDE1-204ENST00000369530 TMEM121Q9BTD3 319 aa6.74□□□□□ -1.33
CSDE1-204ENST00000369530 SPRY4Q9C004 299 aa6.74□□□□□ -1.33
CSDE1-204ENST00000369530 ACOXLQ9NUZ1 547 aa6.74□□□□□ -1.33
CSDE1-204ENST00000369530 ELOVL2Q9NXB9 296 aa6.74□□□□□ -1.33
CSDE1-204ENST00000369530 BCAP29Q9UHQ4 241 aa6.74□□□□□ -1.33
CSDE1-204ENST00000369530 PSME2Q9UL46 239 aa6.74□□□□□ -1.33
CSDE1-204ENST00000369530 TCAF1Q9Y4C2 921 aa6.74□□□□□ -1.33
CSDE1-204ENST00000369530 STON1Q9Y6Q2 735 aa6.74□□□□□ -1.33
CSDE1-204ENST00000369530 MYO18AQ92614 2054 aaKnown RBP6.74□□□□□ -1.33
CSDE1-204ENST00000369530 BOD1L1Q8NFC6 3051 aa6.74□□□□□ -1.33
CSDE1-204ENST00000369530 MAGEB16A2A368 324 aa6.74□□□□□ -1.33
CSDE1-204ENST00000369530 A6NCN8 305 aa6.74□□□□□ -1.33
CSDE1-204ENST00000369530 GSRP00390 522 aa6.74□□□□□ -1.33
CSDE1-204ENST00000369530 SNRPAP09012 282 aaKnown RBP6.74□□□□□ -1.33
CSDE1-204ENST00000369530 ZSCAN5DPP0CG00 497 aa6.74□□□□□ -1.33
CSDE1-204ENST00000369530 ITGAXP20702 1163 aa6.74□□□□□ -1.33
CSDE1-204ENST00000369530 IL10P22301 178 aa6.74□□□□□ -1.33
CSDE1-204ENST00000369530 DDOSTP39656 456 aa6.74□□□□□ -1.33
CSDE1-204ENST00000369530 CTSKP43235 329 aa6.74□□□□□ -1.33
CSDE1-204ENST00000369530 ITGA8P53708 1063 aa6.74□□□□□ -1.33
CSDE1-204ENST00000369530 OCA2Q04671 838 aa6.74□□□□□ -1.33
CSDE1-204ENST00000369530 SQSTM1Q13501 440 aa6.74□□□□□ -1.33
CSDE1-204ENST00000369530 RAB39AQ14964 217 aa6.74□□□□□ -1.33
CSDE1-204ENST00000369530 STK11Q15831 433 aa6.74□□□□□ -1.33
CSDE1-204ENST00000369530 SMU1Q2TAY7 513 aa6.74□□□□□ -1.33
CSDE1-204ENST00000369530 KCTD11Q693B1 232 aa6.74□□□□□ -1.33
CSDE1-204ENST00000369530 NCBP2-AS2Q69YL0 99 aa6.74□□□□□ -1.33
CSDE1-204ENST00000369530 KIAA0408Q6ZU52 694 aa6.74□□□□□ -1.33
CSDE1-204ENST00000369530 ALYREFQ86V81 257 aaKnown RBP6.74□□□□□ -1.33
CSDE1-204ENST00000369530 TP53INP2Q8IXH6 220 aa6.74□□□□□ -1.33
CSDE1-204ENST00000369530 SIX6OS1Q8N1H7 587 aa6.74□□□□□ -1.33
CSDE1-204ENST00000369530 PLD5Q8N7P1 536 aa6.74□□□□□ -1.33
CSDE1-204ENST00000369530 ABHD11Q8NFV4 315 aa6.74□□□□□ -1.33
CSDE1-204ENST00000369530 OR6F1Q8NGZ6 308 aa6.74□□□□□ -1.33
CSDE1-204ENST00000369530 ARRDC2Q8TBH0 407 aa6.74□□□□□ -1.33
CSDE1-204ENST00000369530 DHX35Q9H5Z1 703 aaKnown RBP6.74□□□□□ -1.33
CSDE1-204ENST00000369530 ATP13A3Q9H7F0 1226 aa6.74□□□□□ -1.33
CSDE1-204ENST00000369530 FARSBQ9NSD9 589 aaKnown RBP6.74□□□□□ -1.33
CSDE1-204ENST00000369530 SIRPGQ9P1W8 387 aa6.74□□□□□ -1.33
CSDE1-204ENST00000369530 SEMA5BQ9P283 1151 aa6.74□□□□□ -1.33
CSDE1-204ENST00000369530 RIMKLBQ9ULI2 386 aa6.74□□□□□ -1.33
CSDE1-204ENST00000369530 VWA7Q9Y334 891 aa6.74□□□□□ -1.33
CSDE1-204ENST00000369530 A0A0G2JMP0 313 aa6.73□□□□□ -1.33
CSDE1-204ENST00000369530 A0A0G2JND7 137 aa6.73□□□□□ -1.33
CSDE1-204ENST00000369530 MYOCOSA0A1B0GUC4 107 aa6.73□□□□□ -1.33
CSDE1-204ENST00000369530 METTL12A8MUP2 240 aa6.73□□□□□ -1.33
CSDE1-204ENST00000369530 TMX2-CTNND1H3BSU7 103 aa6.73□□□□□ -1.33
CSDE1-204ENST00000369530 AKAP10O43572 662 aa6.73□□□□□ -1.33
CSDE1-204ENST00000369530 PSTPIP1O43586 416 aa6.73□□□□□ -1.33
CSDE1-204ENST00000369530 APBB3O95704 486 aa6.73□□□□□ -1.33
CSDE1-204ENST00000369530 CDH1P12830 882 aa6.73□□□□□ -1.33
CSDE1-204ENST00000369530 ETS1P14921 441 aa6.73□□□□□ -1.33
CSDE1-204ENST00000369530 CCNA2P20248 432 aa6.73□□□□□ -1.33
CSDE1-204ENST00000369530 CA4P22748 312 aa6.73□□□□□ -1.33
CSDE1-204ENST00000369530 GLDCP23378 1020 aa6.73□□□□□ -1.33
CSDE1-204ENST00000369530 ADRA1DP25100 572 aa6.73□□□□□ -1.33
CSDE1-204ENST00000369530 PIK3R1P27986 724 aa6.73□□□□□ -1.33
CSDE1-204ENST00000369530 NTSR1P30989 418 aa6.73□□□□□ -1.33
CSDE1-204ENST00000369530 NME3Q13232 169 aa6.73□□□□□ -1.33
CSDE1-204ENST00000369530 NAB1Q13506 487 aa6.73□□□□□ -1.33
CSDE1-204ENST00000369530 TMED2Q15363 201 aa6.73□□□□□ -1.33
CSDE1-204ENST00000369530 CLVS2Q5SYC1 327 aa6.73□□□□□ -1.33
CSDE1-204ENST00000369530 LRRC38Q5VT99 294 aa6.73□□□□□ -1.33
CSDE1-204ENST00000369530 ZCCHC8Q6NZY4 707 aaKnown RBP6.73□□□□□ -1.33
CSDE1-204ENST00000369530 HDDC2Q7Z4H3 204 aa6.73□□□□□ -1.33
CSDE1-204ENST00000369530 IQCHQ86VS3 1027 aa6.73□□□□□ -1.33
CSDE1-204ENST00000369530 LRRN4Q8WUT4 740 aa6.73□□□□□ -1.33
CSDE1-204ENST00000369530 COX14Q96I36 57 aa6.73□□□□□ -1.33
CSDE1-204ENST00000369530 DNPEPQ9ULA0 475 aa6.73□□□□□ -1.33
CSDE1-204ENST00000369530 FER1L5A0AVI2 2057 aa6.73□□□□□ -1.33
CSDE1-204ENST00000369530 A0A0D9SEW6 157 aa6.73□□□□□ -1.33
CSDE1-204ENST00000369530 FAM25AB3EWG3 89 aa6.73□□□□□ -1.33
CSDE1-204ENST00000369530 FAM25CB3EWG5 89 aa6.73□□□□□ -1.33
CSDE1-204ENST00000369530 FAM25GB3EWG6 89 aa6.73□□□□□ -1.33
CSDE1-204ENST00000369530 H0Y858 1186 aa6.73□□□□□ -1.33
CSDE1-204ENST00000369530 H3BMH7 237 aa6.73□□□□□ -1.33
CSDE1-204ENST00000369530 SLC22A2O15244 555 aa6.73□□□□□ -1.33
CSDE1-204ENST00000369530 SMAD6O43541 496 aaKnown RBP6.73□□□□□ -1.33
CSDE1-204ENST00000369530 OR5F1O95221 314 aa6.73□□□□□ -1.33
CSDE1-204ENST00000369530 PTTG1O95997 202 aa6.73□□□□□ -1.33
CSDE1-204ENST00000369530 ENO1P06733 434 aaKnown RBP6.73□□□□□ -1.33
CSDE1-204ENST00000369530 GPD1P21695 349 aa6.73□□□□□ -1.33
CSDE1-204ENST00000369530 TYK2P29597 1187 aa6.73□□□□□ -1.33
CSDE1-204ENST00000369530 CD40LGP29965 261 aa6.73□□□□□ -1.33
CSDE1-204ENST00000369530 ADRA1AP35348 466 aa6.73□□□□□ -1.33
CSDE1-204ENST00000369530 HADHAP40939 763 aa6.73□□□□□ -1.33
CSDE1-204ENST00000369530 OPRL1P41146 370 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms