RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 PRR20BP86481 221 aa9.56□□□□□ -0.88
CD48-202ENST00000368046 PRR20AP86496 221 aa9.56□□□□□ -0.88
CD48-202ENST00000368046 ACY1Q03154 408 aa9.56□□□□□ -0.88
CD48-202ENST00000368046 VAC14Q08AM6 782 aa9.56□□□□□ -0.88
CD48-202ENST00000368046 CBLBQ13191 982 aa9.56□□□□□ -0.88
CD48-202ENST00000368046 CTBP1Q13363 440 aa9.56□□□□□ -0.88
CD48-202ENST00000368046 TMED2Q15363 201 aa9.56□□□□□ -0.88
CD48-202ENST00000368046 BBS9Q3SYG4 887 aa9.56□□□□□ -0.88
CD48-202ENST00000368046 MSS51Q4VC12 460 aa9.56□□□□□ -0.88
CD48-202ENST00000368046 HSP90AA5PQ58FG0 334 aa9.56□□□□□ -0.88
CD48-202ENST00000368046 ZNF789Q5FWF6 425 aa9.56□□□□□ -0.88
CD48-202ENST00000368046 SPANXN3Q5MJ09 141 aa9.56□□□□□ -0.88
CD48-202ENST00000368046 CTSL3PQ5NE16 218 aa9.56□□□□□ -0.88
CD48-202ENST00000368046 TMTC4Q5T4D3 741 aa9.56□□□□□ -0.88
CD48-202ENST00000368046 TTC23LQ6PF05 361 aa9.56□□□□□ -0.88
CD48-202ENST00000368046 UNC5DQ6UXZ4 953 aa9.56□□□□□ -0.88
CD48-202ENST00000368046 UNC5AQ6ZN44 842 aa9.56□□□□□ -0.88
CD48-202ENST00000368046 CCDC81Q6ZN84 652 aa9.56□□□□□ -0.88
CD48-202ENST00000368046 GPR155Q7Z3F1 870 aa9.56□□□□□ -0.88
CD48-202ENST00000368046 VRK3Q8IV63 474 aa9.56□□□□□ -0.88
CD48-202ENST00000368046 DENND6AQ8IWF6 608 aa9.56□□□□□ -0.88
CD48-202ENST00000368046 ADGRF3Q8IZF5 1079 aa9.56□□□□□ -0.88
CD48-202ENST00000368046 SIDT2Q8NBJ9 832 aaKnown RBP9.56□□□□□ -0.88
CD48-202ENST00000368046 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.56□□□□□ -0.88
CD48-202ENST00000368046 BBOF1Q8ND07 529 aa9.56□□□□□ -0.88
CD48-202ENST00000368046 GABPB2Q8TAK5 448 aaPredicted RBP9.56□□□□□ -0.88
CD48-202ENST00000368046 LKAAEAR1Q8TD35 194 aa9.56□□□□□ -0.88
CD48-202ENST00000368046 SNRNP27Q8WVK2 155 aaKnown RBP9.56□□□□□ -0.88
CD48-202ENST00000368046 NKD1Q969G9 470 aa9.56□□□□□ -0.88
CD48-202ENST00000368046 PMEPA1Q969W9 287 aa9.56□□□□□ -0.88
CD48-202ENST00000368046 LRRC39Q96DD0 335 aa9.56□□□□□ -0.88
CD48-202ENST00000368046 CRELD1Q96HD1 420 aa9.56□□□□□ -0.88
CD48-202ENST00000368046 FCRL4Q96PJ5 515 aa9.56□□□□□ -0.88
CD48-202ENST00000368046 ERP44Q9BS26 406 aa9.56□□□□□ -0.88
CD48-202ENST00000368046 XKR8Q9H6D3 395 aa9.56□□□□□ -0.88
CD48-202ENST00000368046 PDE7BQ9NP56 450 aa9.56□□□□□ -0.88
CD48-202ENST00000368046 IL1RAPL1Q9NZN1 696 aa9.56□□□□□ -0.88
CD48-202ENST00000368046 OR6C2Q9NZP2 312 aa9.56□□□□□ -0.88
CD48-202ENST00000368046 PILRAQ9UKJ1 303 aa9.56□□□□□ -0.88
CD48-202ENST00000368046 TDRKHQ9Y2W6 561 aaKnown RBP9.56□□□□□ -0.88
CD48-202ENST00000368046 MRFAP1Q9Y605 127 aa9.56□□□□□ -0.88
CD48-202ENST00000368046 APC2O95996 2303 aa9.56□□□□□ -0.88
CD48-202ENST00000368046 PIPSLA2A3N6 862 aa9.55□□□□□ -0.88
CD48-202ENST00000368046 E5RI56 91 aa9.55□□□□□ -0.88
CD48-202ENST00000368046 K7ENP7 123 aa9.55□□□□□ -0.88
CD48-202ENST00000368046 BTN3A1O00481 513 aa9.55□□□□□ -0.88
CD48-202ENST00000368046 NIPSNAP2O75323 286 aa9.55□□□□□ -0.88
CD48-202ENST00000368046 SPAG6O75602 509 aa9.55□□□□□ -0.88
CD48-202ENST00000368046 FOLR1P15328 257 aa9.55□□□□□ -0.88
CD48-202ENST00000368046 CDH3P22223 829 aa9.55□□□□□ -0.88
CD48-202ENST00000368046 SHMT2P34897 504 aa9.55□□□□□ -0.88
CD48-202ENST00000368046 ATP1A2P50993 1020 aa9.55□□□□□ -0.88
CD48-202ENST00000368046 KPNA2P52292 529 aaKnown RBP9.55□□□□□ -0.88
CD48-202ENST00000368046 ITGA8P53708 1063 aa9.55□□□□□ -0.88
CD48-202ENST00000368046 ARL4CP56559 192 aa9.55□□□□□ -0.88
CD48-202ENST00000368046 CXADRP78310 365 aa9.55□□□□□ -0.88
CD48-202ENST00000368046 KYNUQ16719 465 aa9.55□□□□□ -0.88
CD48-202ENST00000368046 ZNF470Q6ECI4 717 aa9.55□□□□□ -0.88
CD48-202ENST00000368046 INO80CQ6PI98 192 aaPredicted RBP9.55□□□□□ -0.88
CD48-202ENST00000368046 PPP1R3BQ86XI6 285 aa9.55□□□□□ -0.88
CD48-202ENST00000368046 IGDCC3Q8IVU1 814 aa9.55□□□□□ -0.88
CD48-202ENST00000368046 CACNA2D3Q8IZS8 1091 aa9.55□□□□□ -0.88
CD48-202ENST00000368046 D2HGDHQ8N465 521 aa9.55□□□□□ -0.88
CD48-202ENST00000368046 CFAP61Q8NHU2 1237 aa9.55□□□□□ -0.88
CD48-202ENST00000368046 RAD51AP1Q96B01 352 aa9.55□□□□□ -0.88
CD48-202ENST00000368046 SNF8Q96H20 258 aa9.55□□□□□ -0.88
CD48-202ENST00000368046 FOPNLQ96NB1 174 aa9.55□□□□□ -0.88
CD48-202ENST00000368046 NRTNQ99748 197 aa9.55□□□□□ -0.88
CD48-202ENST00000368046 TRIM51Q9BSJ1 452 aa9.55□□□□□ -0.88
CD48-202ENST00000368046 FAM167BQ9BTA0 163 aa9.55□□□□□ -0.88
CD48-202ENST00000368046 HGH1Q9BTY7 390 aa9.55□□□□□ -0.88
CD48-202ENST00000368046 TRIM31Q9BZY9 425 aa9.55□□□□□ -0.88
CD48-202ENST00000368046 TWSG1Q9GZX9 223 aa9.55□□□□□ -0.88
CD48-202ENST00000368046 CPNE5Q9HCH3 593 aa9.55□□□□□ -0.88
CD48-202ENST00000368046 SYTL2Q9HCH5 934 aa9.55□□□□□ -0.88
CD48-202ENST00000368046 FBXO6Q9NRD1 293 aaPredicted RBP9.55□□□□□ -0.88
CD48-202ENST00000368046 KLHL42Q9P2K6 505 aa9.55□□□□□ -0.88
CD48-202ENST00000368046 GALPQ9UBC7 116 aa9.55□□□□□ -0.88
CD48-202ENST00000368046 FBXO5Q9UKT4 447 aa9.55□□□□□ -0.88
CD48-202ENST00000368046 POMT2Q9UKY4 750 aa9.55□□□□□ -0.88
CD48-202ENST00000368046 ICKQ9UPZ9 632 aa9.55□□□□□ -0.88
CD48-202ENST00000368046 SNX24Q9Y343 169 aa9.55□□□□□ -0.88
CD48-202ENST00000368046 TMEM184BQ9Y519 407 aaPredicted RBP9.55□□□□□ -0.88
CD48-202ENST00000368046 COMMD10Q9Y6G5 202 aa9.55□□□□□ -0.88
CD48-202ENST00000368046 TEX264Q9Y6I9 313 aa9.55□□□□□ -0.88
CD48-202ENST00000368046 ZFC3H1O60293 1989 aaKnown RBP9.55□□□□□ -0.88
CD48-202ENST00000368046 PKD1L2Q7Z442 2459 aa9.55□□□□□ -0.88
CD48-202ENST00000368046 ITPR1Q14643 2758 aa9.54□□□□□ -0.88
CD48-202ENST00000368046 TEX51A0A1B0GUA7 166 aa9.54□□□□□ -0.88
CD48-202ENST00000368046 GSAPA4D1B5 854 aa9.54□□□□□ -0.88
CD48-202ENST00000368046 SLC9B1P1A6NJY1 282 aa9.54□□□□□ -0.88
CD48-202ENST00000368046 TP73O15350 636 aa9.54□□□□□ -0.88
CD48-202ENST00000368046 RAD1O60671 282 aa9.54□□□□□ -0.88
CD48-202ENST00000368046 WFS1O76024 890 aa9.54□□□□□ -0.88
CD48-202ENST00000368046 STK17BO94768 372 aa9.54□□□□□ -0.88
CD48-202ENST00000368046 MATN4O95460 622 aa9.54□□□□□ -0.88
CD48-202ENST00000368046 C1orf105O95561 183 aa9.54□□□□□ -0.88
CD48-202ENST00000368046 TUBB4AP04350 444 aa9.54□□□□□ -0.88
CD48-202ENST00000368046 ERVK-10P10266 1014 aa9.54□□□□□ -0.88
CD48-202ENST00000368046 CD9P21926 228 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms