RNA–Protein interactions for RNA: ENST00000368010.3

PFDN2-201, Transcript of prefoldin subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN2, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN2-201ENST00000368010 PITPNM3Q9BZ71 974 aa23.19■■□□□ 1.3
PFDN2-201ENST00000368010 C20orf96Q9NUD7 363 aaPredicted RBP23.19■■□□□ 1.3
PFDN2-201ENST00000368010 OR6C2Q9NZP2 312 aa23.19■■□□□ 1.3
PFDN2-201ENST00000368010 PCDHGA4Q9Y5G9 962 aa23.19■■□□□ 1.3
PFDN2-201ENST00000368010 SLC9B1P1A6NJY1 282 aa23.18■■□□□ 1.3
PFDN2-201ENST00000368010 NIPSNAP2O75323 286 aa23.18■■□□□ 1.3
PFDN2-201ENST00000368010 SPAG6O75602 509 aa23.18■■□□□ 1.3
PFDN2-201ENST00000368010 LIFP15018 202 aa23.18■■□□□ 1.3
PFDN2-201ENST00000368010 PGAM1P18669 254 aa23.18■■□□□ 1.3
PFDN2-201ENST00000368010 WT1P19544 449 aaPredicted RBP23.18■■□□□ 1.3
PFDN2-201ENST00000368010 IVDP26440 423 aa23.18■■□□□ 1.3
PFDN2-201ENST00000368010 DCUN1D3Q8IWE4 304 aa23.18■■□□□ 1.3
PFDN2-201ENST00000368010 SERBP1Q8NC51 408 aaKnown RBP eCLIP23.18■■□□□ 1.3
PFDN2-201ENST00000368010 CALML6Q8TD86 181 aa23.18■■□□□ 1.3
PFDN2-201ENST00000368010 FCRL4Q96PJ5 515 aa23.18■■□□□ 1.3
PFDN2-201ENST00000368010 LNPEPQ9UIQ6 1025 aa23.18■■□□□ 1.3
PFDN2-201ENST00000368010 PLAGL1Q9UM63 463 aa23.18■■□□□ 1.3
PFDN2-201ENST00000368010 ERVH48-1M5A8F1 160 aa23.17■■□□□ 1.3
PFDN2-201ENST00000368010 TTI1O43156 1089 aa23.17■■□□□ 1.3
PFDN2-201ENST00000368010 MAP3K7O43318 606 aa23.17■■□□□ 1.3
PFDN2-201ENST00000368010 KIAA0754O94854 1291 aa23.17■■□□□ 1.3
PFDN2-201ENST00000368010 TPBGLP0DKB5 382 aa23.17■■□□□ 1.3
PFDN2-201ENST00000368010 PKMP14618 531 aaKnown RBP23.17■■□□□ 1.3
PFDN2-201ENST00000368010 CHRM3P20309 590 aa23.17■■□□□ 1.3
PFDN2-201ENST00000368010 TUBB4BP68371 445 aa23.17■■□□□ 1.3
PFDN2-201ENST00000368010 DHX9Q08211 1270 aaKnown RBP23.17■■□□□ 1.3
PFDN2-201ENST00000368010 ABHD18Q0P651 414 aa23.17■■□□□ 1.3
PFDN2-201ENST00000368010 TUBB2AQ13885 445 aa23.17■■□□□ 1.3
PFDN2-201ENST00000368010 MORF4L2Q15014 288 aa23.17■■□□□ 1.3
PFDN2-201ENST00000368010 KIAA1614Q5VZ46 1190 aa23.17■■□□□ 1.3
PFDN2-201ENST00000368010 DENND6AQ8IWF6 608 aa23.17■■□□□ 1.3
PFDN2-201ENST00000368010 C17orf53Q8N3J3 647 aaPredicted RBP23.17■■□□□ 1.3
PFDN2-201ENST00000368010 SKA2Q8WVK7 121 aaPredicted RBP23.17■■□□□ 1.3
PFDN2-201ENST00000368010 BBC3Q96PG8 261 aaPredicted RBP23.17■■□□□ 1.3
PFDN2-201ENST00000368010 TUBB2BQ9BVA1 445 aa23.17■■□□□ 1.3
PFDN2-201ENST00000368010 GPN2Q9H9Y4 310 aaPredicted RBP23.17■■□□□ 1.3
PFDN2-201ENST00000368010 FAM169AQ9Y6X4 670 aa23.17■■□□□ 1.3
PFDN2-201ENST00000368010 E5RI56 91 aa23.16■■□□□ 1.3
PFDN2-201ENST00000368010 SMAPO00193 183 aa23.16■■□□□ 1.3
PFDN2-201ENST00000368010 ATXN7O15265 892 aaPredicted RBP23.16■■□□□ 1.3
PFDN2-201ENST00000368010 S1PR4O95977 384 aa23.16■■□□□ 1.3
PFDN2-201ENST00000368010 CHRM5P08912 532 aaPredicted RBP23.16■■□□□ 1.3
PFDN2-201ENST00000368010 ST6GAL1P15907 406 aa23.16■■□□□ 1.3
PFDN2-201ENST00000368010 CASQ1P31415 396 aa23.16■■□□□ 1.3
PFDN2-201ENST00000368010 RAB28P51157 221 aa23.16■■□□□ 1.3
PFDN2-201ENST00000368010 CTBP1Q13363 440 aa23.16■■□□□ 1.3
PFDN2-201ENST00000368010 ZNF789Q5FWF6 425 aa23.16■■□□□ 1.3
PFDN2-201ENST00000368010 TTC23LQ6PF05 361 aa23.16■■□□□ 1.3
PFDN2-201ENST00000368010 SPESP1Q6UW49 350 aa23.16■■□□□ 1.3
PFDN2-201ENST00000368010 C6orf15Q6UXA7 325 aaPredicted RBP23.16■■□□□ 1.3
PFDN2-201ENST00000368010 GALNT6Q8NCL4 622 aa23.16■■□□□ 1.3
PFDN2-201ENST00000368010 FAM136AQ96C01 138 aa23.16■■□□□ 1.3
PFDN2-201ENST00000368010 RNF31Q96EP0 1072 aa23.16■■□□□ 1.3
PFDN2-201ENST00000368010 TRIM51Q9BSJ1 452 aa23.16■■□□□ 1.3
PFDN2-201ENST00000368010 FAM167BQ9BTA0 163 aa23.16■■□□□ 1.3
PFDN2-201ENST00000368010 NAT9Q9BTE0 207 aa23.16■■□□□ 1.3
PFDN2-201ENST00000368010 EFHD1Q9BUP0 239 aa23.16■■□□□ 1.3
PFDN2-201ENST00000368010 CCDC68Q9H2F9 335 aa23.16■■□□□ 1.3
PFDN2-201ENST00000368010 FANCEQ9HB96 536 aa23.16■■□□□ 1.3
PFDN2-201ENST00000368010 FBXO6Q9NRD1 293 aaPredicted RBP23.16■■□□□ 1.3
PFDN2-201ENST00000368010 MRFAP1Q9Y605 127 aa23.16■■□□□ 1.3
PFDN2-201ENST00000368010 NBEAQ8NFP9 2946 aa23.15■■□□□ 1.3
PFDN2-201ENST00000368010 LOC101059948A0A1B0GTJ6 334 aa23.15■■□□□ 1.3
PFDN2-201ENST00000368010 TIAF1O95411 115 aa23.15■■□□□ 1.3
PFDN2-201ENST00000368010 TTC4O95801 387 aa23.15■■□□□ 1.3
PFDN2-201ENST00000368010 MT-ND3P03897 115 aa23.15■■□□□ 1.3
PFDN2-201ENST00000368010 UGT2B7P16662 529 aa23.15■■□□□ 1.3
PFDN2-201ENST00000368010 PKLRP30613 574 aa23.15■■□□□ 1.3
PFDN2-201ENST00000368010 STAT5AP42229 794 aa23.15■■□□□ 1.3
PFDN2-201ENST00000368010 SLC1A2P43004 574 aa23.15■■□□□ 1.3
PFDN2-201ENST00000368010 ETF1P62495 437 aaKnown RBP23.15■■□□□ 1.3
PFDN2-201ENST00000368010 CRYMQ14894 314 aa23.15■■□□□ 1.3
PFDN2-201ENST00000368010 GPR19Q15760 415 aa23.15■■□□□ 1.3
PFDN2-201ENST00000368010 BBS9Q3SYG4 887 aa23.15■■□□□ 1.3
PFDN2-201ENST00000368010 TAF1BQ53T94 588 aaPredicted RBP23.15■■□□□ 1.3
PFDN2-201ENST00000368010 PWWP2BQ6NUJ5 590 aa23.15■■□□□ 1.3
PFDN2-201ENST00000368010 UNC5BQ8IZJ1 945 aa23.15■■□□□ 1.3
PFDN2-201ENST00000368010 PDIK1LQ8N165 341 aa23.15■■□□□ 1.3
PFDN2-201ENST00000368010 ZBTB2Q8N680 514 aa23.15■■□□□ 1.3
PFDN2-201ENST00000368010 LSM14AQ8ND56 463 aaKnown RBP23.15■■□□□ 1.3
PFDN2-201ENST00000368010 OR8K5Q8NH50 307 aa23.15■■□□□ 1.3
PFDN2-201ENST00000368010 ZNF501Q96CX3 271 aaPredicted RBP23.15■■□□□ 1.3
PFDN2-201ENST00000368010 FOPNLQ96NB1 174 aa23.15■■□□□ 1.3
PFDN2-201ENST00000368010 TRAPPC9Q96Q05 1148 aa23.15■■□□□ 1.3
PFDN2-201ENST00000368010 KRT12Q99456 494 aa23.15■■□□□ 1.3
PFDN2-201ENST00000368010 EBNA1BP2Q99848 306 aaKnown RBP23.15■■□□□ 1.3
PFDN2-201ENST00000368010 SYTL2Q9HCH5 934 aa23.15■■□□□ 1.3
PFDN2-201ENST00000368010 SPHK1Q9NYA1 384 aa23.15■■□□□ 1.3
PFDN2-201ENST00000368010 CACNA1GO43497 2377 aa23.15■■□□□ 1.3
PFDN2-201ENST00000368010 EIF4E1BA6NMX2 242 aaKnown RBP23.14■■□□□ 1.29
PFDN2-201ENST00000368010 PVRP15151 417 aa23.14■■□□□ 1.29
PFDN2-201ENST00000368010 ATP5DP30049 168 aa23.14■■□□□ 1.29
PFDN2-201ENST00000368010 KYNUQ16719 465 aa23.14■■□□□ 1.29
PFDN2-201ENST00000368010 MSS51Q4VC12 460 aa23.14■■□□□ 1.29
PFDN2-201ENST00000368010 HSP90AA5PQ58FG0 334 aa23.14■■□□□ 1.29
PFDN2-201ENST00000368010 SPANXN3Q5MJ09 141 aa23.14■■□□□ 1.29
PFDN2-201ENST00000368010 HIBCHQ6NVY1 386 aaPredicted RBP23.14■■□□□ 1.29
PFDN2-201ENST00000368010 KCNMB4Q86W47 210 aa23.14■■□□□ 1.29
PFDN2-201ENST00000368010 PIAS4Q8N2W9 510 aaPredicted RBP23.14■■□□□ 1.29
PFDN2-201ENST00000368010 GABPB2Q8TAK5 448 aaPredicted RBP23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms