RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 CPA5Q8WXQ8 436 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 C19orf12Q9NSK7 152 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 MTRRQ9UBK8 725 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 TET3O43151 1660 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 CERS1P27544 350 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 NDUFS1P28331 727 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 MTDHQ86UE4 582 aaKnown RBP3.7□□□□□ -1.82
SYNE1-207ENST00000367255 TRPV3Q8NET8 790 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 AHCYL2Q96HN2 611 aaKnown RBP3.7□□□□□ -1.82
SYNE1-207ENST00000367255 AARSD1Q9BTE6 412 aaKnown RBP3.7□□□□□ -1.82
SYNE1-207ENST00000367255 CRLF2Q9HC73 371 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 GMEB2Q9UKD1 530 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 OAS3Q9Y6K5 1087 aaKnown RBP3.7□□□□□ -1.82
SYNE1-207ENST00000367255 SPDYE2BA6NHP3 402 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 IRS4O14654 1257 aaPredicted RBP3.69□□□□□ -1.82
SYNE1-207ENST00000367255 CBR3O75828 277 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 FGF1P05230 155 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 SPDYE6P0CI01 402 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 TCF7P36402 384 aaPredicted RBP3.69□□□□□ -1.82
SYNE1-207ENST00000367255 TBCEQ15813 527 aaPredicted RBP3.69□□□□□ -1.82
SYNE1-207ENST00000367255 SPDYE2Q495Y8 402 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 C10orf90Q96M02 699 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 TXNDC17Q9BRA2 123 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 CCM2LQ9NUG4 571 aaPredicted RBP3.69□□□□□ -1.82
SYNE1-207ENST00000367255 NDRG3Q9UGV2 375 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 PCDHGC3Q9UN70 934 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 GRIN3BO60391 1043 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 SLC22A3O75751 556 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 UGT2B17O75795 530 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 DNTTP04053 509 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 RPL9P32969 192 aaKnown RBP3.69□□□□□ -1.82
SYNE1-207ENST00000367255 EVI2BP34910 448 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 UGT2B15P54855 530 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 MANEALQ5VSG8 457 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 SYDE2Q5VT97 1194 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 PHACTR4Q8IZ21 702 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 SEMA6DQ8NFY4 1073 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 ST7LQ8TDW4 575 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 NTAN1Q96AB6 310 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 TBL1YQ9BQ87 522 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 NTPCRQ9BSD7 190 aaKnown RBP3.69□□□□□ -1.82
SYNE1-207ENST00000367255 PRAMEF1O95521 474 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 CSN2P05814 226 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 GRK5P34947 590 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 PCDH1Q08174 1060 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 RTL8BQ17RB0 113 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 KCTD9Q7L273 389 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 MAP4K3Q8IVH8 894 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 CPSF7Q8N684 471 aaKnown RBP3.69□□□□□ -1.82
SYNE1-207ENST00000367255 MRPL9Q9BYD2 267 aaKnown RBP3.69□□□□□ -1.82
SYNE1-207ENST00000367255 ZNF112Q9UJU3 913 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 BTRCQ9Y297 605 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 FBXO7Q9Y3I1 522 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 TCP10L2B9ZVM9 353 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 TLX1P31314 330 aaPredicted RBP3.69□□□□□ -1.82
SYNE1-207ENST00000367255 ZNF143P52747 638 aaPredicted RBP3.69□□□□□ -1.82
SYNE1-207ENST00000367255 TSPAN5P62079 268 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 TFAP2DQ7Z6R9 452 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 OR5AK2Q8NH90 309 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 GPR151Q8TDV0 419 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 SLC39A13Q96H72 371 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.69□□□□□ -1.82
SYNE1-207ENST00000367255 SLC28A1O00337 649 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 SEC14L2O76054 403 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 DDCP20711 480 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 STXBP1P61764 594 aaKnown RBP3.69□□□□□ -1.82
SYNE1-207ENST00000367255 PRAMEP78395 509 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 CHRNDQ07001 517 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 MFSD13AQ14CX5 517 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 CTF1Q16619 201 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 TSTD1Q8NFU3 115 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 SETD1BQ9UPS6 1966 aaKnown RBP3.69□□□□□ -1.82
SYNE1-207ENST00000367255 RAB11FIP2Q7L804 512 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 BANPQ8N9N5 519 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 UROC1Q96N76 676 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 FDXACB1Q9BRP7 624 aaPredicted RBP3.69□□□□□ -1.82
SYNE1-207ENST00000367255 MROQ9BYG7 248 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 ZYG11BQ9C0D3 744 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 IKZF4Q9H2S9 585 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 LY9Q9HBG7 655 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 TEX10Q9NXF1 929 aaPredicted RBP3.69□□□□□ -1.82
SYNE1-207ENST00000367255 DISP1Q96F81 1524 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 PPP5D1E7EU14 171 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 C22orf31O95567 290 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 GKN3PP0CG01 181 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 HK1P19367 917 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 GPD1P21695 349 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 RIPPLY2Q5TAB7 128 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 FAM109BQ6ICB4 259 aaPredicted RBP3.69□□□□□ -1.82
SYNE1-207ENST00000367255 CARM1Q86X55 608 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 SPASTQ9UBP0 616 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 C1orf167Q5SNV9 1468 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 RFPL2O75678 378 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 CPN2P22792 545 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 MYF6P23409 242 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 TMEM132BQ14DG7 1078 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 ATXN7L2Q5T6C5 722 aaPredicted RBP3.69□□□□□ -1.82
SYNE1-207ENST00000367255 SSX7Q7RTT5 188 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 OR4C15Q8NGM1 316 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 RCN3Q96D15 328 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms