RNA–Protein interactions for RNA: ENST00000366942.3

USH2A-202, Transcript of usherin, humanhuman

TSL 1 (best) BASIC

Gene USH2A, Length 6,320 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-202ENST00000366942 SERTM1A2A2V5 107 aa4.02□□□□□ -1.77
USH2A-202ENST00000366942 TRPC5OSA6NMA1 111 aa4.02□□□□□ -1.77
USH2A-202ENST00000366942 PRR23D1E9PI22 279 aaPredicted RBP4.02□□□□□ -1.77
USH2A-202ENST00000366942 GRID2O43424 1007 aa4.02□□□□□ -1.77
USH2A-202ENST00000366942 RGS14O43566 566 aa4.02□□□□□ -1.77
USH2A-202ENST00000366942 F2P00734 622 aa4.02□□□□□ -1.77
USH2A-202ENST00000366942 PRR23D2P0DMB1 279 aaPredicted RBP4.02□□□□□ -1.77
USH2A-202ENST00000366942 ARL3P36405 182 aa4.02□□□□□ -1.77
USH2A-202ENST00000366942 SLC1A2P43004 574 aa4.02□□□□□ -1.77
USH2A-202ENST00000366942 RAD52P43351 418 aa4.02□□□□□ -1.77
USH2A-202ENST00000366942 CCT3P49368 545 aaKnown RBP4.02□□□□□ -1.77
USH2A-202ENST00000366942 AGTR2P50052 363 aa4.02□□□□□ -1.77
USH2A-202ENST00000366942 ZNF33BQ06732 778 aa4.02□□□□□ -1.77
USH2A-202ENST00000366942 PPIDQ08752 370 aaKnown RBP4.02□□□□□ -1.77
USH2A-202ENST00000366942 ABHD18Q0P651 414 aa4.02□□□□□ -1.77
USH2A-202ENST00000366942 DHCR24Q15392 516 aa4.02□□□□□ -1.77
USH2A-202ENST00000366942 EXT1Q16394 746 aa4.02□□□□□ -1.77
USH2A-202ENST00000366942 LRRC26Q2I0M4 334 aa4.02□□□□□ -1.77
USH2A-202ENST00000366942 SLC36A3Q495N2 470 aa4.02□□□□□ -1.77
USH2A-202ENST00000366942 EXOSC6Q5RKV6 272 aaKnown RBP4.02□□□□□ -1.77
USH2A-202ENST00000366942 FAM45BPQ6NSW5 357 aa4.02□□□□□ -1.77
USH2A-202ENST00000366942 C19orf48Q6RUI8 117 aa4.02□□□□□ -1.77
USH2A-202ENST00000366942 SHC4Q6S5L8 630 aa4.02□□□□□ -1.77
USH2A-202ENST00000366942 Q7L0L9 218 aa4.02□□□□□ -1.77
USH2A-202ENST00000366942 EPM2AIP1Q7L775 607 aaPredicted RBP4.02□□□□□ -1.77
USH2A-202ENST00000366942 ZC3H18Q86VM9 953 aaKnown RBP4.02□□□□□ -1.77
USH2A-202ENST00000366942 TMEM102Q8N9M5 508 aaPredicted RBP4.02□□□□□ -1.77
USH2A-202ENST00000366942 TERB1Q8NA31 727 aa4.02□□□□□ -1.77
USH2A-202ENST00000366942 ZBED6CLQ96FA7 236 aaPredicted RBP4.02□□□□□ -1.77
USH2A-202ENST00000366942 LRFN5Q96NI6 719 aa4.02□□□□□ -1.77
USH2A-202ENST00000366942 NECAB3Q96P71 396 aaPredicted RBP4.02□□□□□ -1.77
USH2A-202ENST00000366942 BPIFA3Q9BQP9 254 aa4.02□□□□□ -1.77
USH2A-202ENST00000366942 PBX4Q9BYU1 374 aa4.02□□□□□ -1.77
USH2A-202ENST00000366942 SHCBP1LQ9BZQ2 653 aa4.02□□□□□ -1.77
USH2A-202ENST00000366942 KCNK12Q9HB15 430 aa4.02□□□□□ -1.77
USH2A-202ENST00000366942 TRPV5Q9NQA5 729 aa4.02□□□□□ -1.77
USH2A-202ENST00000366942 ENAMQ9NRM1 1142 aa4.02□□□□□ -1.77
USH2A-202ENST00000366942 OR12D3Q9UGF7 316 aa4.02□□□□□ -1.77
USH2A-202ENST00000366942 TSPAN16Q9UKR8 245 aa4.02□□□□□ -1.77
USH2A-202ENST00000366942 SH3GLB1Q9Y371 365 aa4.02□□□□□ -1.77
USH2A-202ENST00000366942 A0A1W2PQ27 194 aa4.02□□□□□ -1.77
USH2A-202ENST00000366942 A0A1W2PQ64 194 aa4.02□□□□□ -1.77
USH2A-202ENST00000366942 GRID2IPA4D2P6 1211 aa4.02□□□□□ -1.77
USH2A-202ENST00000366942 K7EQS6 105 aa4.02□□□□□ -1.77
USH2A-202ENST00000366942 SOX1O00570 391 aaPredicted RBP4.02□□□□□ -1.77
USH2A-202ENST00000366942 MBTPS2O43462 519 aa4.02□□□□□ -1.77
USH2A-202ENST00000366942 PROM1O43490 865 aa4.02□□□□□ -1.77
USH2A-202ENST00000366942 SIGLEC6O43699 453 aa4.02□□□□□ -1.77
USH2A-202ENST00000366942 CBX7O95931 251 aa4.02□□□□□ -1.77
USH2A-202ENST00000366942 CEACAM1P13688 526 aa4.02□□□□□ -1.77
USH2A-202ENST00000366942 RPL26P61254 145 aaKnown RBP4.02□□□□□ -1.77
USH2A-202ENST00000366942 GNA12Q03113 381 aa4.02□□□□□ -1.77
USH2A-202ENST00000366942 SIX1Q15475 284 aaPredicted RBP4.02□□□□□ -1.77
USH2A-202ENST00000366942 NAB2Q15742 525 aa4.02□□□□□ -1.77
USH2A-202ENST00000366942 GPR33Q49SQ1 333 aa4.02□□□□□ -1.77
USH2A-202ENST00000366942 EIPR1Q53HC9 387 aa4.02□□□□□ -1.77
USH2A-202ENST00000366942 WIPI1Q5MNZ9 446 aaPredicted RBP4.02□□□□□ -1.77
USH2A-202ENST00000366942 SH3PXD2AQ5TCZ1 1133 aa4.02□□□□□ -1.77
USH2A-202ENST00000366942 UNC5DQ6UXZ4 953 aa4.02□□□□□ -1.77
USH2A-202ENST00000366942 JAZF1Q86VZ6 243 aa4.02□□□□□ -1.77
USH2A-202ENST00000366942 TCEAL8Q8IYN2 117 aa4.02□□□□□ -1.77
USH2A-202ENST00000366942 DEFB106AQ8N104 65 aa4.02□□□□□ -1.77
USH2A-202ENST00000366942 ABTB1Q969K4 478 aaPredicted RBP4.02□□□□□ -1.77
USH2A-202ENST00000366942 KCTD12Q96CX2 325 aaKnown RBP4.02□□□□□ -1.77
USH2A-202ENST00000366942 INPP4AQ96PE3 977 aaPredicted RBP4.02□□□□□ -1.77
USH2A-202ENST00000366942 CDRT15Q96T59 188 aa4.02□□□□□ -1.77
USH2A-202ENST00000366942 APOOQ9BUR5 198 aa4.02□□□□□ -1.77
USH2A-202ENST00000366942 SUV39H2Q9H5I1 410 aa4.02□□□□□ -1.77
USH2A-202ENST00000366942 RPL26L1Q9UNX3 145 aaKnown RBP4.02□□□□□ -1.77
USH2A-202ENST00000366942 ANGPT4Q9Y264 503 aa4.02□□□□□ -1.77
USH2A-202ENST00000366942 A0A1B0GVT2 93 aa4.02□□□□□ -1.77
USH2A-202ENST00000366942 ARGFXA6NJG6 315 aa4.02□□□□□ -1.77
USH2A-202ENST00000366942 WRBO00258 174 aa4.02□□□□□ -1.77
USH2A-202ENST00000366942 RAD1O60671 282 aa4.02□□□□□ -1.77
USH2A-202ENST00000366942 ZFAND5O76080 213 aa4.02□□□□□ -1.77
USH2A-202ENST00000366942 APRTP07741 180 aa4.02□□□□□ -1.77
USH2A-202ENST00000366942 MMEP08473 750 aa4.02□□□□□ -1.77
USH2A-202ENST00000366942 PRSS56P0CW18 603 aa4.02□□□□□ -1.77
USH2A-202ENST00000366942 PRPS2P11908 318 aa4.02□□□□□ -1.77
USH2A-202ENST00000366942 GOT1P17174 413 aa4.02□□□□□ -1.77
USH2A-202ENST00000366942 CSRP1P21291 193 aaKnown RBP4.02□□□□□ -1.77
USH2A-202ENST00000366942 NMT1P30419 496 aaKnown RBP4.02□□□□□ -1.77
USH2A-202ENST00000366942 HNF4AP41235 474 aa4.02□□□□□ -1.77
USH2A-202ENST00000366942 MAGEA12P43365 314 aa4.02□□□□□ -1.77
USH2A-202ENST00000366942 DRAP1Q14919 205 aaPredicted RBP4.02□□□□□ -1.77
USH2A-202ENST00000366942 CSRP2Q16527 193 aa4.02□□□□□ -1.77
USH2A-202ENST00000366942 FAM69BQ5VUD6 431 aa4.02□□□□□ -1.77
USH2A-202ENST00000366942 PGBD2Q6P3X8 592 aa4.02□□□□□ -1.77
USH2A-202ENST00000366942 ARHGAP36Q6ZRI8 547 aa4.02□□□□□ -1.77
USH2A-202ENST00000366942 MCOLN2Q8IZK6 566 aa4.02□□□□□ -1.77
USH2A-202ENST00000366942 FADS6Q8N9I5 356 aa4.02□□□□□ -1.77
USH2A-202ENST00000366942 KCT2Q8NC54 265 aa4.02□□□□□ -1.77
USH2A-202ENST00000366942 C3orf20Q8ND61 904 aa4.02□□□□□ -1.77
USH2A-202ENST00000366942 IL17RDQ8NFM7 739 aa4.02□□□□□ -1.77
USH2A-202ENST00000366942 OLIG1Q8TAK6 271 aa4.02□□□□□ -1.77
USH2A-202ENST00000366942 CPA5Q8WXQ8 436 aa4.02□□□□□ -1.77
USH2A-202ENST00000366942 RND1Q92730 232 aa4.02□□□□□ -1.77
USH2A-202ENST00000366942 DIO2Q92813 273 aa4.02□□□□□ -1.77
USH2A-202ENST00000366942 C8orf48Q96LL4 319 aa4.02□□□□□ -1.77
USH2A-202ENST00000366942 SLC17A9Q9BYT1 436 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms