RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 A0A1W2PQ72 361 aa11.82□□□□□ -0.52
CDC42BPA-203ENST00000366766 A8MX80 341 aa11.82□□□□□ -0.52
CDC42BPA-203ENST00000366766 CYP11A1P05108 521 aa11.82□□□□□ -0.52
CDC42BPA-203ENST00000366766 OR2T5Q6IEZ7 315 aa11.82□□□□□ -0.52
CDC42BPA-203ENST00000366766 FBXO22Q8NEZ5 403 aa11.82□□□□□ -0.52
CDC42BPA-203ENST00000366766 OR2T29Q8NH02 315 aa11.82□□□□□ -0.52
CDC42BPA-203ENST00000366766 ARAP2Q8WZ64 1704 aa11.82□□□□□ -0.52
CDC42BPA-203ENST00000366766 DLDP09622 509 aaKnown RBP11.82□□□□□ -0.52
CDC42BPA-203ENST00000366766 VARSP26640 1264 aaKnown RBP11.82□□□□□ -0.52
CDC42BPA-203ENST00000366766 KCTD8Q6ZWB6 473 aa11.82□□□□□ -0.52
CDC42BPA-203ENST00000366766 TMEM174Q8WUU8 243 aa11.82□□□□□ -0.52
CDC42BPA-203ENST00000366766 CAPSLQ8WWF8 208 aa11.82□□□□□ -0.52
CDC42BPA-203ENST00000366766 DDX1Q92499 740 aaKnown RBP11.82□□□□□ -0.52
CDC42BPA-203ENST00000366766 UFD1Q92890 307 aa11.82□□□□□ -0.52
CDC42BPA-203ENST00000366766 DIRAS2Q96HU8 199 aa11.82□□□□□ -0.52
CDC42BPA-203ENST00000366766 SLC2A11Q9BYW1 496 aa11.82□□□□□ -0.52
CDC42BPA-203ENST00000366766 VPS29Q9UBQ0 182 aa11.82□□□□□ -0.52
CDC42BPA-203ENST00000366766 TYROBPO43914 113 aa11.82□□□□□ -0.52
CDC42BPA-203ENST00000366766 MNDAP41218 407 aa11.82□□□□□ -0.52
CDC42BPA-203ENST00000366766 STC1P52823 247 aa11.82□□□□□ -0.52
CDC42BPA-203ENST00000366766 CLDN10P78369 228 aa11.82□□□□□ -0.52
CDC42BPA-203ENST00000366766 NUDT13Q86X67 352 aa11.82□□□□□ -0.52
CDC42BPA-203ENST00000366766 IKZF4Q9H2S9 585 aa11.82□□□□□ -0.52
CDC42BPA-203ENST00000366766 DOCK2Q92608 1830 aa11.82□□□□□ -0.52
CDC42BPA-203ENST00000366766 SEMA3DO95025 777 aa11.82□□□□□ -0.52
CDC42BPA-203ENST00000366766 CXCL14O95715 111 aa11.82□□□□□ -0.52
CDC42BPA-203ENST00000366766 ECT2LQ008S8 904 aa11.82□□□□□ -0.52
CDC42BPA-203ENST00000366766 SCAPQ12770 1279 aa11.82□□□□□ -0.52
CDC42BPA-203ENST00000366766 FBXO42Q6P3S6 717 aa11.82□□□□□ -0.52
CDC42BPA-203ENST00000366766 RALGPS2Q86X27 583 aaPredicted RBP11.82□□□□□ -0.52
CDC42BPA-203ENST00000366766 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.82□□□□□ -0.52
CDC42BPA-203ENST00000366766 ATAD1Q8NBU5 361 aa11.82□□□□□ -0.52
CDC42BPA-203ENST00000366766 KCNJ9Q92806 393 aa11.82□□□□□ -0.52
CDC42BPA-203ENST00000366766 MCUBQ9NWR8 336 aa11.82□□□□□ -0.52
CDC42BPA-203ENST00000366766 GALNT8Q9NY28 637 aa11.82□□□□□ -0.52
CDC42BPA-203ENST00000366766 ZFP37Q9Y6Q3 630 aaPredicted RBP11.82□□□□□ -0.52
CDC42BPA-203ENST00000366766 SLC38A8A6NNN8 435 aa11.81□□□□□ -0.52
CDC42BPA-203ENST00000366766 ADNP2Q6IQ32 1131 aa11.81□□□□□ -0.52
CDC42BPA-203ENST00000366766 MBOAT1Q6ZNC8 495 aa11.81□□□□□ -0.52
CDC42BPA-203ENST00000366766 LRTOMTQ8WZ04 291 aa11.81□□□□□ -0.52
CDC42BPA-203ENST00000366766 OR5F1O95221 314 aa11.81□□□□□ -0.52
CDC42BPA-203ENST00000366766 ACADLP28330 430 aa11.81□□□□□ -0.52
CDC42BPA-203ENST00000366766 PDCD4Q53EL6 469 aaKnown RBP11.81□□□□□ -0.52
CDC42BPA-203ENST00000366766 JAZF1Q86VZ6 243 aa11.81□□□□□ -0.52
CDC42BPA-203ENST00000366766 CYP4X1Q8N118 509 aa11.81□□□□□ -0.52
CDC42BPA-203ENST00000366766 C2CD4AQ8NCU7 369 aaPredicted RBP11.81□□□□□ -0.52
CDC42BPA-203ENST00000366766 OR4C6Q8NH72 309 aa11.81□□□□□ -0.52
CDC42BPA-203ENST00000366766 DKK3Q9UBP4 350 aa11.81□□□□□ -0.52
CDC42BPA-203ENST00000366766 RB1P06400 928 aa11.81□□□□□ -0.52
CDC42BPA-203ENST00000366766 CNPY1Q3B7I2 92 aa11.81□□□□□ -0.52
CDC42BPA-203ENST00000366766 CCDC157Q569K6 752 aa11.81□□□□□ -0.52
CDC42BPA-203ENST00000366766 FRG2Q64ET8 278 aa11.81□□□□□ -0.52
CDC42BPA-203ENST00000366766 RNF44Q7L0R7 432 aa11.81□□□□□ -0.52
CDC42BPA-203ENST00000366766 FRG2BQ96QU4 278 aa11.81□□□□□ -0.52
CDC42BPA-203ENST00000366766 ZNF382Q96SR6 550 aa11.81□□□□□ -0.52
CDC42BPA-203ENST00000366766 MCMBPQ9BTE3 642 aa11.81□□□□□ -0.52
CDC42BPA-203ENST00000366766 NFKBIL1Q9UBC1 381 aaPredicted RBP11.81□□□□□ -0.52
CDC42BPA-203ENST00000366766 CD2P06729 351 aa11.81□□□□□ -0.52
CDC42BPA-203ENST00000366766 RORCP51449 518 aa11.81□□□□□ -0.52
CDC42BPA-203ENST00000366766 BLKP51451 505 aa11.81□□□□□ -0.52
CDC42BPA-203ENST00000366766 MAPK10P53779 464 aa11.81□□□□□ -0.52
CDC42BPA-203ENST00000366766 SRP54P61011 504 aaKnown RBP11.81□□□□□ -0.52
CDC42BPA-203ENST00000366766 E7ENX8 843 aa11.81□□□□□ -0.52
CDC42BPA-203ENST00000366766 PGRP06401 933 aa11.81□□□□□ -0.52
CDC42BPA-203ENST00000366766 ITIH1P19827 911 aa11.81□□□□□ -0.52
CDC42BPA-203ENST00000366766 ABHD18Q0P651 414 aa11.81□□□□□ -0.52
CDC42BPA-203ENST00000366766 ERMP1Q7Z2K6 904 aa11.81□□□□□ -0.52
CDC42BPA-203ENST00000366766 WDR48Q8TAF3 677 aa11.81□□□□□ -0.52
CDC42BPA-203ENST00000366766 MKLN1Q9UL63 735 aa11.81□□□□□ -0.52
CDC42BPA-203ENST00000366766 A8MT66 165 aa11.81□□□□□ -0.52
CDC42BPA-203ENST00000366766 CCNKO75909 580 aa11.81□□□□□ -0.52
CDC42BPA-203ENST00000366766 METTL18O95568 372 aa11.81□□□□□ -0.52
CDC42BPA-203ENST00000366766 EMX2Q04743 252 aa11.81□□□□□ -0.52
CDC42BPA-203ENST00000366766 GPR135Q8IZ08 494 aa11.81□□□□□ -0.52
CDC42BPA-203ENST00000366766 FAM98AQ8NCA5 519 aaKnown RBP11.81□□□□□ -0.52
CDC42BPA-203ENST00000366766 TMEM248Q9NWD8 314 aa11.81□□□□□ -0.52
CDC42BPA-203ENST00000366766 MPIP34949 423 aa11.81□□□□□ -0.52
CDC42BPA-203ENST00000366766 IGFALSP35858 605 aa11.81□□□□□ -0.52
CDC42BPA-203ENST00000366766 GSTM4Q03013 218 aa11.81□□□□□ -0.52
CDC42BPA-203ENST00000366766 NIPAL1Q6NVV3 410 aa11.81□□□□□ -0.52
CDC42BPA-203ENST00000366766 PDSS2Q86YH6 399 aa11.81□□□□□ -0.52
CDC42BPA-203ENST00000366766 COQ10BQ9H8M1 238 aa11.81□□□□□ -0.52
CDC42BPA-203ENST00000366766 DHRS7Q9Y394 339 aa11.81□□□□□ -0.52
CDC42BPA-203ENST00000366766 ARPC2O15144 300 aa11.81□□□□□ -0.52
CDC42BPA-203ENST00000366766 ETS2P15036 469 aa11.81□□□□□ -0.52
CDC42BPA-203ENST00000366766 CCR10P46092 362 aa11.81□□□□□ -0.52
CDC42BPA-203ENST00000366766 ALDH3A2P51648 485 aa11.81□□□□□ -0.52
CDC42BPA-203ENST00000366766 IL18Q14116 193 aa11.81□□□□□ -0.52
CDC42BPA-203ENST00000366766 SLC45A3Q96JT2 553 aa11.81□□□□□ -0.52
CDC42BPA-203ENST00000366766 IMP3Q9NV31 184 aaKnown RBP11.81□□□□□ -0.52
CDC42BPA-203ENST00000366766 C2orf71A6NGG8 1288 aa11.8□□□□□ -0.52
CDC42BPA-203ENST00000366766 ITGA10O75578 1167 aa11.8□□□□□ -0.52
CDC42BPA-203ENST00000366766 PRAMEF12O95522 483 aa11.8□□□□□ -0.52
CDC42BPA-203ENST00000366766 LMO2P25791 158 aa11.8□□□□□ -0.52
CDC42BPA-203ENST00000366766 RAB2AP61019 212 aa11.8□□□□□ -0.52
CDC42BPA-203ENST00000366766 EFHD2Q96C19 240 aaPredicted RBP11.8□□□□□ -0.52
CDC42BPA-203ENST00000366766 SMAD5Q99717 465 aaKnown RBP11.8□□□□□ -0.52
CDC42BPA-203ENST00000366766 MOCS1Q9NZB8 636 aa11.8□□□□□ -0.52
CDC42BPA-203ENST00000366766 NR2C1P13056 603 aa11.8□□□□□ -0.52
CDC42BPA-203ENST00000366766 AMZ2Q86W34 360 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms