RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 TRPV5Q9NQA5 729 aa11.59□□□□□ -0.55
CDC42BPA-202ENST00000366764 SLC28A2O43868 658 aa11.59□□□□□ -0.55
CDC42BPA-202ENST00000366764 ZBTB48P10074 688 aaPredicted RBP11.59□□□□□ -0.55
CDC42BPA-202ENST00000366764 SEPHS1P49903 392 aa11.59□□□□□ -0.55
CDC42BPA-202ENST00000366764 HLCSP50747 726 aa11.59□□□□□ -0.55
CDC42BPA-202ENST00000366764 ZNF423Q2M1K9 1284 aa11.59□□□□□ -0.55
CDC42BPA-202ENST00000366764 ZNF614Q8N883 585 aa11.59□□□□□ -0.55
CDC42BPA-202ENST00000366764 ZNF558Q96NG5 402 aa11.59□□□□□ -0.55
CDC42BPA-202ENST00000366764 ANKRD60Q9BZ19 345 aa11.59□□□□□ -0.55
CDC42BPA-202ENST00000366764 TREHO43280 583 aa11.59□□□□□ -0.55
CDC42BPA-202ENST00000366764 XKRXQ6PP77 449 aa11.59□□□□□ -0.55
CDC42BPA-202ENST00000366764 PAQR3Q6TCH7 311 aa11.59□□□□□ -0.55
CDC42BPA-202ENST00000366764 BIRC7Q96CA5 298 aa11.59□□□□□ -0.55
CDC42BPA-202ENST00000366764 CDKN2AIPNLQ96HQ2 116 aa11.59□□□□□ -0.55
CDC42BPA-202ENST00000366764 CHCHD6Q9BRQ6 235 aa11.59□□□□□ -0.55
CDC42BPA-202ENST00000366764 MED28Q9H204 178 aa11.59□□□□□ -0.55
CDC42BPA-202ENST00000366764 CORO1AP31146 461 aaKnown RBP11.59□□□□□ -0.55
CDC42BPA-202ENST00000366764 SERPINA9Q86WD7 417 aa11.59□□□□□ -0.55
CDC42BPA-202ENST00000366764 PCDHGA10Q9Y5H3 936 aa11.59□□□□□ -0.55
CDC42BPA-202ENST00000366764 TFECO14948 347 aaPredicted RBP11.58□□□□□ -0.55
CDC42BPA-202ENST00000366764 MRPS14O60783 128 aaKnown RBP11.58□□□□□ -0.55
CDC42BPA-202ENST00000366764 NPTX1Q15818 432 aa11.58□□□□□ -0.55
CDC42BPA-202ENST00000366764 MED27Q6P2C8 311 aa11.58□□□□□ -0.55
CDC42BPA-202ENST00000366764 LDB1Q86U70 411 aaPredicted RBP11.58□□□□□ -0.55
CDC42BPA-202ENST00000366764 PEX5LQ8IYB4 626 aa11.58□□□□□ -0.55
CDC42BPA-202ENST00000366764 SUSD3Q96L08 255 aa11.58□□□□□ -0.55
CDC42BPA-202ENST00000366764 ZNF395Q9H8N7 513 aaPredicted RBP11.58□□□□□ -0.55
CDC42BPA-202ENST00000366764 NHSL1Q5SYE7 1610 aa11.58□□□□□ -0.56
CDC42BPA-202ENST00000366764 SLC15A1P46059 708 aa11.58□□□□□ -0.56
CDC42BPA-202ENST00000366764 PITRM1Q5JRX3 1037 aa11.58□□□□□ -0.56
CDC42BPA-202ENST00000366764 SIRPB2Q5JXA9 342 aa11.58□□□□□ -0.56
CDC42BPA-202ENST00000366764 OR52E8Q6IFG1 317 aa11.58□□□□□ -0.56
CDC42BPA-202ENST00000366764 FEM1AQ9BSK4 669 aa11.58□□□□□ -0.56
CDC42BPA-202ENST00000366764 HTATIP2Q9BUP3 242 aa11.58□□□□□ -0.56
CDC42BPA-202ENST00000366764 LOC100130705A0A1B0GUX0 176 aa11.58□□□□□ -0.56
CDC42BPA-202ENST00000366764 SDHDO14521 159 aa11.58□□□□□ -0.56
CDC42BPA-202ENST00000366764 POP4O95707 220 aaKnown RBP11.58□□□□□ -0.56
CDC42BPA-202ENST00000366764 MTHFD1P11586 935 aaKnown RBP11.58□□□□□ -0.56
CDC42BPA-202ENST00000366764 HTR1EP28566 365 aa11.58□□□□□ -0.56
CDC42BPA-202ENST00000366764 BTG3Q14201 252 aaPredicted RBP11.58□□□□□ -0.56
CDC42BPA-202ENST00000366764 ZSWIM7Q19AV6 140 aa11.58□□□□□ -0.56
CDC42BPA-202ENST00000366764 CAMKK1Q8N5S9 505 aa11.58□□□□□ -0.56
CDC42BPA-202ENST00000366764 MAGIXQ9H6Y5 334 aa11.58□□□□□ -0.56
CDC42BPA-202ENST00000366764 MINDY3Q9H8M7 445 aa11.58□□□□□ -0.56
CDC42BPA-202ENST00000366764 HSD17B2P37059 387 aa11.58□□□□□ -0.56
CDC42BPA-202ENST00000366764 ATXN1P54253 815 aaKnown RBP11.58□□□□□ -0.56
CDC42BPA-202ENST00000366764 TMEM192Q8IY95 271 aa11.58□□□□□ -0.56
CDC42BPA-202ENST00000366764 ZNF513Q8N8E2 541 aaPredicted RBP11.58□□□□□ -0.56
CDC42BPA-202ENST00000366764 UPF1Q92900 1129 aaKnown RBP eCLIP11.58□□□□□ -0.562e-6■■□□□ 12.6
CDC42BPA-202ENST00000366764 SP140LQ9H930 580 aa11.58□□□□□ -0.56
CDC42BPA-202ENST00000366764 PDLIM7Q9NR12 457 aa11.58□□□□□ -0.56
CDC42BPA-202ENST00000366764 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.58□□□□□ -0.56
CDC42BPA-202ENST00000366764 CTPS1P17812 591 aa11.58□□□□□ -0.56
CDC42BPA-202ENST00000366764 NRLP54845 237 aa11.58□□□□□ -0.56
CDC42BPA-202ENST00000366764 FAM46CQ5VWP2 391 aa11.58□□□□□ -0.56
CDC42BPA-202ENST00000366764 CYP2U1Q7Z449 544 aa11.58□□□□□ -0.56
CDC42BPA-202ENST00000366764 SLC2A13Q96QE2 648 aa11.58□□□□□ -0.56
CDC42BPA-202ENST00000366764 Q9Y3F1 56 aa11.58□□□□□ -0.56
CDC42BPA-202ENST00000366764 CABIN1Q9Y6J0 2220 aa11.58□□□□□ -0.56
CDC42BPA-202ENST00000366764 C1QTNF3-AMACRE9PGA6 284 aa11.58□□□□□ -0.56
CDC42BPA-202ENST00000366764 DCLK1O15075 740 aa11.58□□□□□ -0.56
CDC42BPA-202ENST00000366764 PCDH8O95206 1070 aa11.58□□□□□ -0.56
CDC42BPA-202ENST00000366764 BNIP3Q12983 259 aa11.58□□□□□ -0.56
CDC42BPA-202ENST00000366764 HEPACAMQ14CZ8 416 aa11.58□□□□□ -0.56
CDC42BPA-202ENST00000366764 NR4A3Q92570 626 aa11.58□□□□□ -0.56
CDC42BPA-202ENST00000366764 TOR3AQ9H497 397 aa11.58□□□□□ -0.56
CDC42BPA-202ENST00000366764 ZSCAN32Q9NX65 697 aa11.58□□□□□ -0.56
CDC42BPA-202ENST00000366764 SP140Q13342 867 aa11.58□□□□□ -0.56
CDC42BPA-202ENST00000366764 ZNF404Q494X3 552 aa11.58□□□□□ -0.56
CDC42BPA-202ENST00000366764 LDLRAP1Q5SW96 308 aa11.58□□□□□ -0.56
CDC42BPA-202ENST00000366764 ATG9BQ674R7 924 aa11.58□□□□□ -0.56
CDC42BPA-202ENST00000366764 BLOC1S3Q6QNY0 202 aa11.58□□□□□ -0.56
CDC42BPA-202ENST00000366764 GALNT13Q8IUC8 556 aa11.58□□□□□ -0.56
CDC42BPA-202ENST00000366764 TRUB1Q8WWH5 349 aaKnown RBP11.58□□□□□ -0.56
CDC42BPA-202ENST00000366764 DUSP26Q9BV47 211 aa11.58□□□□□ -0.56
CDC42BPA-202ENST00000366764 NEMP2A6NFY4 417 aa11.58□□□□□ -0.56
CDC42BPA-202ENST00000366764 DDNO94850 711 aaPredicted RBP11.58□□□□□ -0.56
CDC42BPA-202ENST00000366764 SLC35G4P0C7Q5 338 aa11.58□□□□□ -0.56
CDC42BPA-202ENST00000366764 GSTM3P21266 225 aa11.58□□□□□ -0.56
CDC42BPA-202ENST00000366764 CDHR3Q6ZTQ4 885 aa11.58□□□□□ -0.56
CDC42BPA-202ENST00000366764 SAMD14Q8IZD0 417 aaPredicted RBP11.58□□□□□ -0.56
CDC42BPA-202ENST00000366764 PIGXQ8TBF5 258 aa11.58□□□□□ -0.56
CDC42BPA-202ENST00000366764 C17orf50Q8WW18 174 aa11.58□□□□□ -0.56
CDC42BPA-202ENST00000366764 PRORSD1PA6NEY8 169 aa11.57□□□□□ -0.56
CDC42BPA-202ENST00000366764 H0YC42 278 aa11.57□□□□□ -0.56
CDC42BPA-202ENST00000366764 SMPD1P17405 629 aa11.57□□□□□ -0.56
CDC42BPA-202ENST00000366764 CHIT1Q13231 466 aa11.57□□□□□ -0.56
CDC42BPA-202ENST00000366764 CHST9Q7L1S5 443 aa11.57□□□□□ -0.56
CDC42BPA-202ENST00000366764 TMEM233B4DJY2 109 aa11.57□□□□□ -0.56
CDC42BPA-202ENST00000366764 ADH1AP07327 375 aa11.57□□□□□ -0.56
CDC42BPA-202ENST00000366764 GPR1P46091 355 aa11.57□□□□□ -0.56
CDC42BPA-202ENST00000366764 SNAPC1Q16533 368 aa11.57□□□□□ -0.56
CDC42BPA-202ENST00000366764 IZUMO1Q8IYV9 350 aa11.57□□□□□ -0.56
CDC42BPA-202ENST00000366764 SLC38A4Q969I6 547 aa11.57□□□□□ -0.56
CDC42BPA-202ENST00000366764 ACSS2Q9NR19 701 aa11.57□□□□□ -0.56
CDC42BPA-202ENST00000366764 USP2O75604 605 aaPredicted RBP11.57□□□□□ -0.56
CDC42BPA-202ENST00000366764 INMTO95050 263 aa11.57□□□□□ -0.56
CDC42BPA-202ENST00000366764 RGS1Q08116 209 aa11.57□□□□□ -0.56
CDC42BPA-202ENST00000366764 TECRLQ5HYJ1 363 aa11.57□□□□□ -0.56
CDC42BPA-202ENST00000366764 VARS2Q5ST30 1063 aaKnown RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms