RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 TTC1Q99614 292 aa11.03□□□□□ -0.64
CSNK1E-202ENST00000366216 MRPL57Q9BQC6 102 aaKnown RBP11.03□□□□□ -0.64
CSNK1E-202ENST00000366216 MECRQ9BV79 373 aa11.03□□□□□ -0.64
CSNK1E-202ENST00000366216 CCDC68Q9H2F9 335 aa11.03□□□□□ -0.64
CSNK1E-202ENST00000366216 GPAMQ9HCL2 828 aa11.03□□□□□ -0.64
CSNK1E-202ENST00000366216 IL26Q9NPH9 171 aa11.03□□□□□ -0.64
CSNK1E-202ENST00000366216 B4GALT6Q9UBX8 382 aa11.03□□□□□ -0.64
CSNK1E-202ENST00000366216 GLYATL1P3A0A0U1RQE8 302 aa11.02□□□□□ -0.65
CSNK1E-202ENST00000366216 A0A0U1RQS6 177 aa11.02□□□□□ -0.65
CSNK1E-202ENST00000366216 RGSL1A5PLK6 1076 aa11.02□□□□□ -0.65
CSNK1E-202ENST00000366216 AGAP14A8MT82 685 aa11.02□□□□□ -0.65
CSNK1E-202ENST00000366216 G3V2L1 256 aa11.02□□□□□ -0.65
CSNK1E-202ENST00000366216 PRAMEF1O95521 474 aa11.02□□□□□ -0.65
CSNK1E-202ENST00000366216 ESR1P03372 595 aa11.02□□□□□ -0.65
CSNK1E-202ENST00000366216 SERPINE1P05121 402 aa11.02□□□□□ -0.65
CSNK1E-202ENST00000366216 PYGLP06737 847 aa11.02□□□□□ -0.65
CSNK1E-202ENST00000366216 RBP1P09455 135 aa11.02□□□□□ -0.65
CSNK1E-202ENST00000366216 TROVE2P10155 538 aaKnown RBP eCLIP11.02□□□□□ -0.65
CSNK1E-202ENST00000366216 MYL2P10916 166 aa11.02□□□□□ -0.65
CSNK1E-202ENST00000366216 PKMP14618 531 aaKnown RBP11.02□□□□□ -0.65
CSNK1E-202ENST00000366216 LHCGRP22888 699 aa11.02□□□□□ -0.65
CSNK1E-202ENST00000366216 RPS3P23396 243 aaKnown RBP eCLIP11.02□□□□□ -0.65
CSNK1E-202ENST00000366216 UGT1A5P35504 534 aa11.02□□□□□ -0.65
CSNK1E-202ENST00000366216 GMPRP36959 345 aa11.02□□□□□ -0.65
CSNK1E-202ENST00000366216 CDKN1CP49918 316 aaPredicted RBP11.02□□□□□ -0.65
CSNK1E-202ENST00000366216 TIAL1Q01085 375 aaKnown RBP eCLIP11.02□□□□□ -0.65
CSNK1E-202ENST00000366216 OCRLQ01968 901 aa11.02□□□□□ -0.65
CSNK1E-202ENST00000366216 PTSQ03393 145 aa11.02□□□□□ -0.65
CSNK1E-202ENST00000366216 BST1Q10588 318 aa11.02□□□□□ -0.65
CSNK1E-202ENST00000366216 DLG1Q12959 904 aa11.02□□□□□ -0.65
CSNK1E-202ENST00000366216 STX3Q13277 289 aa11.02□□□□□ -0.65
CSNK1E-202ENST00000366216 EIF3IQ13347 325 aaKnown RBP11.02□□□□□ -0.65
CSNK1E-202ENST00000366216 NFATC2Q13469 925 aa11.02□□□□□ -0.65
CSNK1E-202ENST00000366216 FGL2Q14314 439 aa11.02□□□□□ -0.65
CSNK1E-202ENST00000366216 ZNF460Q14592 562 aa11.02□□□□□ -0.65
CSNK1E-202ENST00000366216 ACAP2Q15057 778 aa11.02□□□□□ -0.65
CSNK1E-202ENST00000366216 FAM46CQ5VWP2 391 aa11.02□□□□□ -0.65
CSNK1E-202ENST00000366216 LRRC66Q68CR7 880 aa11.02□□□□□ -0.65
CSNK1E-202ENST00000366216 KLC3Q6P597 504 aa11.02□□□□□ -0.65
CSNK1E-202ENST00000366216 ZYG11AQ6WRX3 759 aa11.02□□□□□ -0.65
CSNK1E-202ENST00000366216 GCNT7Q6ZNI0 430 aa11.02□□□□□ -0.65
CSNK1E-202ENST00000366216 RAB11FIP2Q7L804 512 aa11.02□□□□□ -0.65
CSNK1E-202ENST00000366216 DSG4Q86SJ6 1040 aa11.02□□□□□ -0.65
CSNK1E-202ENST00000366216 TSPAN33Q86UF1 283 aa11.02□□□□□ -0.65
CSNK1E-202ENST00000366216 VASH2Q86V25 355 aa11.02□□□□□ -0.65
CSNK1E-202ENST00000366216 C10orf107Q8IVU9 208 aa11.02□□□□□ -0.65
CSNK1E-202ENST00000366216 RAVER1Q8IY67 606 aaKnown RBP11.02□□□□□ -0.65
CSNK1E-202ENST00000366216 FSTL5Q8N475 847 aaPredicted RBP11.02□□□□□ -0.65
CSNK1E-202ENST00000366216 FBXO39Q8N4B4 442 aa11.02□□□□□ -0.65
CSNK1E-202ENST00000366216 OR8D1Q8WZ84 308 aa11.02□□□□□ -0.65
CSNK1E-202ENST00000366216 SCYL1Q96KG9 808 aa11.02□□□□□ -0.65
CSNK1E-202ENST00000366216 BIRC8Q96P09 236 aa11.02□□□□□ -0.65
CSNK1E-202ENST00000366216 P2RY12Q9H244 342 aa11.02□□□□□ -0.65
CSNK1E-202ENST00000366216 MRPL46Q9H2W6 279 aaKnown RBP11.02□□□□□ -0.65
CSNK1E-202ENST00000366216 SYTL2Q9HCH5 934 aa11.02□□□□□ -0.65
CSNK1E-202ENST00000366216 GPR27Q9NS67 375 aa11.02□□□□□ -0.65
CSNK1E-202ENST00000366216 RAD18Q9NS91 495 aa11.02□□□□□ -0.65
CSNK1E-202ENST00000366216 THAP1Q9NVV9 213 aa11.02□□□□□ -0.65
CSNK1E-202ENST00000366216 TAS2R13Q9NYV9 303 aa11.02□□□□□ -0.65
CSNK1E-202ENST00000366216 PKD2L2Q9NZM6 624 aa11.02□□□□□ -0.65
CSNK1E-202ENST00000366216 KLHL14Q9P2G3 628 aa11.02□□□□□ -0.65
CSNK1E-202ENST00000366216 NFKBIL1Q9UBC1 381 aaPredicted RBP11.02□□□□□ -0.65
CSNK1E-202ENST00000366216 PLEKHB1Q9UF11 243 aaPredicted RBP11.02□□□□□ -0.65
CSNK1E-202ENST00000366216 PNMA8BQ9ULN7 279 aaPredicted RBP11.02□□□□□ -0.65
CSNK1E-202ENST00000366216 SRPK3Q9UPE1 567 aa11.02□□□□□ -0.65
CSNK1E-202ENST00000366216 ZFR2Q9UPR6 939 aaKnown RBP11.02□□□□□ -0.65
CSNK1E-202ENST00000366216 ARL2BPQ9Y2Y0 163 aa11.02□□□□□ -0.65
CSNK1E-202ENST00000366216 OAS3Q9Y6K5 1087 aaKnown RBP11.02□□□□□ -0.65
CSNK1E-202ENST00000366216 CSNK1G3Q9Y6M4 447 aa11.02□□□□□ -0.65
CSNK1E-202ENST00000366216 A0A1W2PQU0 124 aa11.01□□□□□ -0.65
CSNK1E-202ENST00000366216 UBA6A0AVT1 1052 aaPredicted RBP11.01□□□□□ -0.65
CSNK1E-202ENST00000366216 CCDC189A1A4V9 331 aa11.01□□□□□ -0.65
CSNK1E-202ENST00000366216 C16orf96A6NNT2 1141 aa11.01□□□□□ -0.65
CSNK1E-202ENST00000366216 H3BMM5 538 aa11.01□□□□□ -0.65
CSNK1E-202ENST00000366216 PRMT5O14744 637 aaPredicted RBP11.01□□□□□ -0.65
CSNK1E-202ENST00000366216 TRIM13O60858 407 aa11.01□□□□□ -0.65
CSNK1E-202ENST00000366216 SBK3P0C264 359 aa11.01□□□□□ -0.65
CSNK1E-202ENST00000366216 CCDC166P0CW27 439 aa11.01□□□□□ -0.65
CSNK1E-202ENST00000366216 RALBP11234 206 aa11.01□□□□□ -0.65
CSNK1E-202ENST00000366216 ZNF7P17097 686 aaPredicted RBP11.01□□□□□ -0.65
CSNK1E-202ENST00000366216 HNRNPA2B1P22626 353 aaKnown RBP11.01□□□□□ -0.65
CSNK1E-202ENST00000366216 FMO4P31512 558 aa11.01□□□□□ -0.65
CSNK1E-202ENST00000366216 AKT2P31751 481 aa11.01□□□□□ -0.65
CSNK1E-202ENST00000366216 SKIV2L2P42285 1042 aaKnown RBP11.01□□□□□ -0.65
CSNK1E-202ENST00000366216 SPINT3P49223 89 aa11.01□□□□□ -0.65
CSNK1E-202ENST00000366216 PGGT1BP53609 377 aa11.01□□□□□ -0.65
CSNK1E-202ENST00000366216 DCDC1P59894 354 aa11.01□□□□□ -0.65
CSNK1E-202ENST00000366216 ASPHQ12797 758 aa11.01□□□□□ -0.65
CSNK1E-202ENST00000366216 KCNAB2Q13303 367 aa11.01□□□□□ -0.65
CSNK1E-202ENST00000366216 ARHGEF7Q14155 803 aa11.01□□□□□ -0.65
CSNK1E-202ENST00000366216 CSHL1Q14406 222 aa11.01□□□□□ -0.65
CSNK1E-202ENST00000366216 CHRNA6Q15825 494 aa11.01□□□□□ -0.65
CSNK1E-202ENST00000366216 ZNF284Q2VY69 593 aa11.01□□□□□ -0.65
CSNK1E-202ENST00000366216 DEFB133Q30KQ1 61 aa11.01□□□□□ -0.65
CSNK1E-202ENST00000366216 TECRLQ5HYJ1 363 aa11.01□□□□□ -0.65
CSNK1E-202ENST00000366216 PIP5KL1Q5T9C9 394 aa11.01□□□□□ -0.65
CSNK1E-202ENST00000366216 TMEM207Q6UWW9 146 aa11.01□□□□□ -0.65
CSNK1E-202ENST00000366216 FAM151BQ6UXP7 276 aa11.01□□□□□ -0.65
CSNK1E-202ENST00000366216 Q6ZSR6 202 aa11.01□□□□□ -0.65
CSNK1E-202ENST00000366216 DPPA4Q7L190 304 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms