RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 TMC5Q6UXY8 1006 aa16.02■□□□□ 0.15
SCAF1-201ENST00000360565 ZNF461Q8TAF7 563 aa16.02■□□□□ 0.15
SCAF1-201ENST00000360565 PIH1D2Q8WWB5 315 aa16.02■□□□□ 0.15
SCAF1-201ENST00000360565 PGAP3Q96FM1 320 aaPredicted RBP16.02■□□□□ 0.15
SCAF1-201ENST00000360565 CXCL16Q9H2A7 254 aa16.02■□□□□ 0.15
SCAF1-201ENST00000360565 STMN3Q9NZ72 180 aa16.02■□□□□ 0.15
SCAF1-201ENST00000360565 CRNNQ9UBG3 495 aaPredicted RBP16.02■□□□□ 0.15
SCAF1-201ENST00000360565 MARF1Q9Y4F3 1742 aaKnown RBP16.02■□□□□ 0.15
SCAF1-201ENST00000360565 CLIC1O00299 241 aa16.02■□□□□ 0.15
SCAF1-201ENST00000360565 GRID2O43424 1007 aa16.02■□□□□ 0.15
SCAF1-201ENST00000360565 TLL1O43897 1013 aa16.02■□□□□ 0.15
SCAF1-201ENST00000360565 ITGA1P56199 1179 aa16.02■□□□□ 0.15
SCAF1-201ENST00000360565 LAPTM5Q13571 262 aa16.02■□□□□ 0.15
SCAF1-201ENST00000360565 ANKRD49Q8WVL7 239 aa16.02■□□□□ 0.15
SCAF1-201ENST00000360565 EXOSC8Q96B26 276 aaKnown RBP16.02■□□□□ 0.15
SCAF1-201ENST00000360565 C20orf27Q9GZN8 174 aa16.02■□□□□ 0.15
SCAF1-201ENST00000360565 ZC4H2Q9NQZ6 224 aa16.02■□□□□ 0.15
SCAF1-201ENST00000360565 CAPN14A8MX76 684 aa16.01■□□□□ 0.15
SCAF1-201ENST00000360565 TNNI3P19429 210 aa16.01■□□□□ 0.15
SCAF1-201ENST00000360565 PTCHD3Q3KNS1 767 aa16.01■□□□□ 0.15
SCAF1-201ENST00000360565 ZBED5Q49AG3 693 aa16.01■□□□□ 0.15
SCAF1-201ENST00000360565 FAM46CQ5VWP2 391 aa16.01■□□□□ 0.15
SCAF1-201ENST00000360565 FRG2Q64ET8 278 aa16.01■□□□□ 0.15
SCAF1-201ENST00000360565 NANOGP8Q6NSW7 305 aa16.01■□□□□ 0.15
SCAF1-201ENST00000360565 CDC73Q6P1J9 531 aa16.01■□□□□ 0.15
SCAF1-201ENST00000360565 SLC15A3Q8IY34 581 aa16.01■□□□□ 0.15
SCAF1-201ENST00000360565 C3orf58Q8NDZ4 430 aa16.01■□□□□ 0.15
SCAF1-201ENST00000360565 RAB2BQ8WUD1 216 aa16.01■□□□□ 0.15
SCAF1-201ENST00000360565 TRIB2Q92519 343 aa16.01■□□□□ 0.15
SCAF1-201ENST00000360565 TEFMQ96QE5 360 aaKnown RBP16.01■□□□□ 0.15
SCAF1-201ENST00000360565 FRG2BQ96QU4 278 aa16.01■□□□□ 0.15
SCAF1-201ENST00000360565 NANOGQ9H9S0 305 aa16.01■□□□□ 0.15
SCAF1-201ENST00000360565 CCDC177Q9NQR7 707 aaPredicted RBP16.01■□□□□ 0.15
SCAF1-201ENST00000360565 SRRDQ9UH36 339 aa16.01■□□□□ 0.15
SCAF1-201ENST00000360565 DNAJC15Q9Y5T4 150 aa16.01■□□□□ 0.15
SCAF1-201ENST00000360565 DDX60LQ5H9U9 1706 aaKnown RBP16.01■□□□□ 0.15
SCAF1-201ENST00000360565 ADAMDEC1O15204 470 aa16.01■□□□□ 0.15
SCAF1-201ENST00000360565 NDUFS2O75306 463 aa16.01■□□□□ 0.15
SCAF1-201ENST00000360565 IFNW1P05000 195 aa16.01■□□□□ 0.15
SCAF1-201ENST00000360565 PRPS1L1P21108 318 aa16.01■□□□□ 0.15
SCAF1-201ENST00000360565 RING1Q06587 406 aa16.01■□□□□ 0.15
SCAF1-201ENST00000360565 ELP6Q0PNE2 266 aa16.01■□□□□ 0.15
SCAF1-201ENST00000360565 DPY19L1Q2PZI1 675 aa16.01■□□□□ 0.15
SCAF1-201ENST00000360565 LUZP2Q86TE4 346 aa16.01■□□□□ 0.15
SCAF1-201ENST00000360565 ZNF513Q8N8E2 541 aaPredicted RBP16.01■□□□□ 0.15
SCAF1-201ENST00000360565 PAWRQ96IZ0 340 aaKnown RBP16.01■□□□□ 0.15
SCAF1-201ENST00000360565 RNF11Q9Y3C5 154 aa16.01■□□□□ 0.15
SCAF1-201ENST00000360565 NR2F6P10588 404 aa16.01■□□□□ 0.15
SCAF1-201ENST00000360565 PTSQ03393 145 aa16.01■□□□□ 0.15
SCAF1-201ENST00000360565 EMX2Q04743 252 aa16.01■□□□□ 0.15
SCAF1-201ENST00000360565 TLDC1Q6P9B6 456 aa16.01■□□□□ 0.15
SCAF1-201ENST00000360565 Q6ZVU0 165 aa16.01■□□□□ 0.15
SCAF1-201ENST00000360565 ERI1Q8IV48 349 aaKnown RBP16.01■□□□□ 0.15
SCAF1-201ENST00000360565 RHEBL1Q8TAI7 183 aa16.01■□□□□ 0.15
SCAF1-201ENST00000360565 SERHL2Q9H4I8 314 aa16.01■□□□□ 0.15
SCAF1-201ENST00000360565 MEAF6Q9HAF1 191 aa16.01■□□□□ 0.15
SCAF1-201ENST00000360565 SERHLQ9NQF3 203 aa16.01■□□□□ 0.15
SCAF1-201ENST00000360565 VPS29Q9UBQ0 182 aa16.01■□□□□ 0.15
SCAF1-201ENST00000360565 PRNPP04156 253 aa16■□□□□ 0.15
SCAF1-201ENST00000360565 TLX1P31314 330 aaPredicted RBP16■□□□□ 0.15
SCAF1-201ENST00000360565 SEPHS1P49903 392 aa16■□□□□ 0.15
SCAF1-201ENST00000360565 TLE2Q04725 743 aa16■□□□□ 0.15
SCAF1-201ENST00000360565 PTGR1Q14914 329 aa16■□□□□ 0.15
SCAF1-201ENST00000360565 C9orf64Q5T6V5 341 aa16■□□□□ 0.15
SCAF1-201ENST00000360565 ISCA2Q86U28 154 aa16■□□□□ 0.15
SCAF1-201ENST00000360565 NRG4Q8WWG1 115 aa16■□□□□ 0.15
SCAF1-201ENST00000360565 GTPBP3Q969Y2 492 aaKnown RBP16■□□□□ 0.15
SCAF1-201ENST00000360565 MAST2Q6P0Q8 1798 aa16■□□□□ 0.15
SCAF1-201ENST00000360565 PRORSD1PA6NEY8 169 aa16■□□□□ 0.15
SCAF1-201ENST00000360565 MAPK9P45984 424 aa16■□□□□ 0.15
SCAF1-201ENST00000360565 C1QTNF8P60827 252 aa16■□□□□ 0.15
SCAF1-201ENST00000360565 OLR1P78380 273 aa16■□□□□ 0.15
SCAF1-201ENST00000360565 CARD16Q5EG05 197 aa16■□□□□ 0.15
SCAF1-201ENST00000360565 CEP78Q5JTW2 689 aa16■□□□□ 0.15
SCAF1-201ENST00000360565 PEX13Q92968 403 aa16■□□□□ 0.15
SCAF1-201ENST00000360565 SLC38A2Q96QD8 506 aa16■□□□□ 0.15
SCAF1-201ENST00000360565 POPDC3Q9HBV1 291 aa16■□□□□ 0.15
SCAF1-201ENST00000360565 RBM47A0AV96 593 aaKnown RBP16■□□□□ 0.15
SCAF1-201ENST00000360565 COCHO43405 550 aa16■□□□□ 0.15
SCAF1-201ENST00000360565 TMCC2O75069 709 aa16■□□□□ 0.15
SCAF1-201ENST00000360565 FMO3P31513 532 aa16■□□□□ 0.15
SCAF1-201ENST00000360565 ATP4BP51164 291 aa16■□□□□ 0.15
SCAF1-201ENST00000360565 MAPK12P53778 367 aa16■□□□□ 0.15
SCAF1-201ENST00000360565 SH3BP2P78314 561 aa16■□□□□ 0.15
SCAF1-201ENST00000360565 MS4A2Q01362 244 aa16■□□□□ 0.15
SCAF1-201ENST00000360565 ZNF438Q7Z4V0 828 aa16■□□□□ 0.15
SCAF1-201ENST00000360565 KBTBD6Q86V97 674 aa16■□□□□ 0.15
SCAF1-201ENST00000360565 TTC9BQ8N6N2 239 aa16■□□□□ 0.15
SCAF1-201ENST00000360565 ZNF366Q8N895 744 aa16■□□□□ 0.15
SCAF1-201ENST00000360565 ACVR1CQ8NER5 493 aa16■□□□□ 0.15
SCAF1-201ENST00000360565 ZUFSPQ96AP4 578 aa16■□□□□ 0.15
SCAF1-201ENST00000360565 CXorf40BQ96DE9 158 aa16■□□□□ 0.15
SCAF1-201ENST00000360565 EQTNQ9NQ60 294 aa16■□□□□ 0.15
SCAF1-201ENST00000360565 AASDHPPTQ9NRN7 309 aa16■□□□□ 0.15
SCAF1-201ENST00000360565 NCKAP1Q9Y2A7 1128 aa16■□□□□ 0.15
SCAF1-201ENST00000360565 SAP18O00422 153 aaKnown RBP16■□□□□ 0.15
SCAF1-201ENST00000360565 GALTP07902 379 aa16■□□□□ 0.15
SCAF1-201ENST00000360565 ZNF10P21506 573 aaPredicted RBP16■□□□□ 0.15
SCAF1-201ENST00000360565 PRKACGP22612 351 aa16■□□□□ 0.15
SCAF1-201ENST00000360565 BNIP3Q12983 259 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms