RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 SLC39A12Q504Y0 691 aa8.09□□□□□ -1.11
CDC42SE1-201ENST00000357235 ZRANB3Q5FWF4 1079 aa8.09□□□□□ -1.11
CDC42SE1-201ENST00000357235 C6orf141Q5SZD1 244 aa8.09□□□□□ -1.11
CDC42SE1-201ENST00000357235 ATAD3CQ5T2N8 411 aa8.09□□□□□ -1.11
CDC42SE1-201ENST00000357235 TTC23Q5W5X9 447 aa8.09□□□□□ -1.11
CDC42SE1-201ENST00000357235 SPATA19Q7Z5L4 167 aa8.09□□□□□ -1.11
CDC42SE1-201ENST00000357235 KCTD20Q7Z5Y7 419 aa8.09□□□□□ -1.11
CDC42SE1-201ENST00000357235 RBM23Q86U06 439 aaKnown RBP8.09□□□□□ -1.11
CDC42SE1-201ENST00000357235 PROSER1Q86XN7 944 aa8.09□□□□□ -1.11
CDC42SE1-201ENST00000357235 PHACTR4Q8IZ21 702 aa8.09□□□□□ -1.11
CDC42SE1-201ENST00000357235 GPC2Q8N158 579 aa8.09□□□□□ -1.11
CDC42SE1-201ENST00000357235 PGBD5Q8N414 524 aa8.09□□□□□ -1.11
CDC42SE1-201ENST00000357235 EEF1AKMT1Q8WVE0 214 aa8.09□□□□□ -1.11
CDC42SE1-201ENST00000357235 FUBP1Q96AE4 644 aaKnown RBP8.09□□□□□ -1.11
CDC42SE1-201ENST00000357235 SLC39A13Q96H72 371 aa8.09□□□□□ -1.11
CDC42SE1-201ENST00000357235 NODALQ96S42 347 aa8.09□□□□□ -1.11
CDC42SE1-201ENST00000357235 RTP3Q9BQQ7 232 aa8.09□□□□□ -1.11
CDC42SE1-201ENST00000357235 FEM1AQ9BSK4 669 aa8.09□□□□□ -1.11
CDC42SE1-201ENST00000357235 AARSD1Q9BTE6 412 aaKnown RBP8.09□□□□□ -1.11
CDC42SE1-201ENST00000357235 ZYG11BQ9C0D3 744 aa8.09□□□□□ -1.11
CDC42SE1-201ENST00000357235 ABCG8Q9H221 673 aa8.09□□□□□ -1.11
CDC42SE1-201ENST00000357235 FBXO8Q9NRD0 319 aa8.09□□□□□ -1.11
CDC42SE1-201ENST00000357235 OSER1Q9NX31 292 aa8.09□□□□□ -1.11
CDC42SE1-201ENST00000357235 PAQR5Q9NXK6 330 aaPredicted RBP8.09□□□□□ -1.11
CDC42SE1-201ENST00000357235 MAGEL2Q9UJ55 1249 aa8.09□□□□□ -1.11
CDC42SE1-201ENST00000357235 ZNF225Q9UK10 706 aa8.09□□□□□ -1.11
CDC42SE1-201ENST00000357235 VPS4AQ9UN37 437 aa8.09□□□□□ -1.11
CDC42SE1-201ENST00000357235 CFL2Q9Y281 166 aa8.09□□□□□ -1.11
CDC42SE1-201ENST00000357235 MROH6A6NGR9 719 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 H0Y858 1186 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 H0YAE9 185 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 ARVCFO00192 962 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 MEN1O00255 615 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 MUSKO15146 869 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 AXIN1O15169 862 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 UGT2B11O75310 529 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 RPP40O75818 363 aaKnown RBP8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 C7P10643 843 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 UROSP10746 265 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 ATF4P18848 351 aaPredicted RBP8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 HTR2BP41595 481 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 MAP2K4P45985 399 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 ALDH7A1P49419 539 aaKnown RBP8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 STC1P52823 247 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 CRYBB1P53674 252 aaPredicted RBP8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 TBX4P57082 545 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 RPL38P63173 70 aaKnown RBP8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 NFKB2Q00653 900 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 FOXM1Q08050 763 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 GTF2H3Q13889 308 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 AP5B1Q2VPB7 878 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 CTU2Q2VPK5 515 aaKnown RBP8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 XKR4Q5GH76 650 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 AGAP6Q5VW22 663 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 DESI1Q6ICB0 168 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 SDE2Q6IQ49 451 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 TRAF7Q6Q0C0 670 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 USP51Q70EK9 711 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 DET1Q7L5Y6 550 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 GLT6D1Q7Z4J2 308 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 GPR142Q7Z601 462 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 GPSM1Q86YR5 675 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 FBXL6Q8N531 539 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 LEMD2Q8NC56 503 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 OR56A4Q8NGH8 313 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 OR6F1Q8NGZ6 308 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 NDNFQ8TB73 568 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 KIAA1191Q96A73 305 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 LINGO1Q96FE5 620 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 AURKBQ96GD4 344 aaPredicted RBP8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 CDKN2AIPNLQ96HQ2 116 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 ZNF599Q96NL3 588 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 AGAP4Q96P64 663 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 AMBRA1Q9C0C7 1298 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 TFB2MQ9H5Q4 396 aaKnown RBP8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 CARS2Q9HA77 564 aaKnown RBP8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 DIABLOQ9NR28 239 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 TLR9Q9NR96 1032 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 WDR70Q9NW82 654 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 VAPAQ9P0L0 249 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 TRMT6Q9UJA5 497 aaKnown RBP8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 SBF1O95248 1867 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 ARPC4-TTLL3A0A0A6YYG9 625 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 GPR182O15218 404 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 SHOXO15266 292 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 VPS4BO75351 444 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 TRIM16O95361 564 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 F2P00734 622 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 ATXN1LP0C7T5 689 aaKnown RBP8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 HTR1EP28566 365 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 GRK4P32298 578 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 PSEN2P49810 448 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 EMX2Q04743 252 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 SKIV2LQ15477 1246 aaKnown RBP8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 FAM174BQ3ZCQ3 159 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 RFTN2Q52LD8 501 aaPredicted RBP8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 SCD5Q86SK9 330 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 PTRH1Q86Y79 214 aaKnown RBP8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 LYSMD2Q8IV50 215 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 CCDC117Q8IWD4 279 aaPredicted RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms