RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 ISM1B1AKI9 464 aa10.31□□□□□ -0.76
CAPN3-204ENST00000356316 ZNF185O15231 689 aa10.31□□□□□ -0.76
CAPN3-204ENST00000356316 RPN2P04844 631 aa10.31□□□□□ -0.76
CAPN3-204ENST00000356316 PVRP15151 417 aa10.31□□□□□ -0.76
CAPN3-204ENST00000356316 RORAP35398 523 aa10.31□□□□□ -0.76
CAPN3-204ENST00000356316 PTGIRP43119 386 aa10.31□□□□□ -0.76
CAPN3-204ENST00000356316 LSM11P83369 360 aaKnown RBP eCLIP10.31□□□□□ -0.76
CAPN3-204ENST00000356316 ABRQ12979 859 aa10.31□□□□□ -0.76
CAPN3-204ENST00000356316 KLF1Q13351 362 aaPredicted RBP10.31□□□□□ -0.76
CAPN3-204ENST00000356316 NCF4Q15080 339 aa10.31□□□□□ -0.76
CAPN3-204ENST00000356316 CCDC38Q502W7 563 aa10.31□□□□□ -0.76
CAPN3-204ENST00000356316 SEL1L2Q5TEA6 688 aa10.31□□□□□ -0.76
CAPN3-204ENST00000356316 MLIPQ5VWP3 458 aa10.31□□□□□ -0.76
CAPN3-204ENST00000356316 CPZQ66K79 652 aa10.31□□□□□ -0.76
CAPN3-204ENST00000356316 LCN10Q6JVE6 187 aa10.31□□□□□ -0.76
CAPN3-204ENST00000356316 PACS1Q6VY07 963 aa10.31□□□□□ -0.76
CAPN3-204ENST00000356316 CDHR3Q6ZTQ4 885 aa10.31□□□□□ -0.76
CAPN3-204ENST00000356316 NLRP9Q7RTR0 991 aa10.31□□□□□ -0.76
CAPN3-204ENST00000356316 HPS6Q86YV9 775 aa10.31□□□□□ -0.76
CAPN3-204ENST00000356316 PIANPQ8IYJ0 282 aa10.31□□□□□ -0.76
CAPN3-204ENST00000356316 OR52K1Q8NGK4 314 aa10.31□□□□□ -0.76
CAPN3-204ENST00000356316 OR5AR1Q8NGP9 310 aa10.31□□□□□ -0.76
CAPN3-204ENST00000356316 OR5K2Q8NHB8 316 aa10.31□□□□□ -0.76
CAPN3-204ENST00000356316 GSDMBQ8TAX9 411 aa10.31□□□□□ -0.76
CAPN3-204ENST00000356316 SLC35B2Q8TB61 432 aa10.31□□□□□ -0.76
CAPN3-204ENST00000356316 CPT1CQ8TCG5 803 aa10.31□□□□□ -0.76
CAPN3-204ENST00000356316 UBE2Q2Q8WVN8 375 aa10.31□□□□□ -0.76
CAPN3-204ENST00000356316 HDAC10Q969S8 669 aa10.31□□□□□ -0.76
CAPN3-204ENST00000356316 IP6K3Q96PC2 410 aa10.31□□□□□ -0.76
CAPN3-204ENST00000356316 DHRS4Q9BTZ2 278 aa10.31□□□□□ -0.76
CAPN3-204ENST00000356316 FRMD8P1Q9BZ68 369 aaPredicted RBP10.31□□□□□ -0.76
CAPN3-204ENST00000356316 RBSNQ9H1K0 784 aa10.31□□□□□ -0.76
CAPN3-204ENST00000356316 LRRC4CQ9HCJ2 640 aa10.31□□□□□ -0.76
CAPN3-204ENST00000356316 SLAMF7Q9NQ25 335 aa10.31□□□□□ -0.76
CAPN3-204ENST00000356316 TXLNGQ9NUQ3 528 aa10.31□□□□□ -0.76
CAPN3-204ENST00000356316 OR6C2Q9NZP2 312 aa10.31□□□□□ -0.76
CAPN3-204ENST00000356316 NDOR1Q9UHB4 597 aa10.31□□□□□ -0.76
CAPN3-204ENST00000356316 TNRC6AQ8NDV7 1962 aaKnown RBP10.31□□□□□ -0.76
CAPN3-204ENST00000356316 PIKFYVEQ9Y2I7 2098 aa10.3□□□□□ -0.76
CAPN3-204ENST00000356316 PRRC2CQ9Y520 2896 aaKnown RBP10.3□□□□□ -0.76
CAPN3-204ENST00000356316 CCDC162PA2VCL2 907 aa10.3□□□□□ -0.76
CAPN3-204ENST00000356316 GOLGA6L6A8MZA4 724 aa10.3□□□□□ -0.76
CAPN3-204ENST00000356316 PEX12O00623 359 aa10.3□□□□□ -0.76
CAPN3-204ENST00000356316 KLHL41O60662 606 aa10.3□□□□□ -0.76
CAPN3-204ENST00000356316 DPM1O60762 260 aa10.3□□□□□ -0.76
CAPN3-204ENST00000356316 IFNB1P01574 187 aa10.3□□□□□ -0.76
CAPN3-204ENST00000356316 IGHEP01854 428 aa10.3□□□□□ -0.76
CAPN3-204ENST00000356316 PDGFAP04085 211 aa10.3□□□□□ -0.76
CAPN3-204ENST00000356316 CHRM5P08912 532 aaPredicted RBP10.3□□□□□ -0.76
CAPN3-204ENST00000356316 UGT2B7P16662 529 aa10.3□□□□□ -0.76
CAPN3-204ENST00000356316 ADRA1DP25100 572 aa10.3□□□□□ -0.76
CAPN3-204ENST00000356316 VARSP26640 1264 aaKnown RBP10.3□□□□□ -0.76
CAPN3-204ENST00000356316 OTX2P32243 289 aa10.3□□□□□ -0.76
CAPN3-204ENST00000356316 FDFT1P37268 417 aa10.3□□□□□ -0.76
CAPN3-204ENST00000356316 CD97P48960 835 aa10.3□□□□□ -0.76
CAPN3-204ENST00000356316 CSE1LP55060 971 aaKnown RBP10.3□□□□□ -0.76
CAPN3-204ENST00000356316 GDF10P55107 478 aa10.3□□□□□ -0.76
CAPN3-204ENST00000356316 PRAMEP78395 509 aa10.3□□□□□ -0.76
CAPN3-204ENST00000356316 PTCHD3Q3KNS1 767 aa10.3□□□□□ -0.76
CAPN3-204ENST00000356316 ZNF658BQ4V348 819 aaPredicted RBP10.3□□□□□ -0.76
CAPN3-204ENST00000356316 FASTKD1Q53R41 847 aaKnown RBP10.3□□□□□ -0.76
CAPN3-204ENST00000356316 TTC23LQ6PF05 361 aa10.3□□□□□ -0.76
CAPN3-204ENST00000356316 AFTPHQ6ULP2 937 aa10.3□□□□□ -0.76
CAPN3-204ENST00000356316 RNF10Q8N5U6 811 aaKnown RBP10.3□□□□□ -0.76
CAPN3-204ENST00000356316 CCDC89Q8N998 374 aa10.3□□□□□ -0.76
CAPN3-204ENST00000356316 C19orf47Q8N9M1 422 aaKnown RBP10.3□□□□□ -0.76
CAPN3-204ENST00000356316 OR4L1Q8NH43 312 aa10.3□□□□□ -0.76
CAPN3-204ENST00000356316 ADAMTS17Q8TE56 1095 aa10.3□□□□□ -0.76
CAPN3-204ENST00000356316 ASZ1Q8WWH4 475 aa10.3□□□□□ -0.76
CAPN3-204ENST00000356316 SLC22A18Q96BI1 424 aa10.3□□□□□ -0.76
CAPN3-204ENST00000356316 HES6Q96HZ4 224 aa10.3□□□□□ -0.76
CAPN3-204ENST00000356316 FER1L6-AS2Q96M78 137 aa10.3□□□□□ -0.76
CAPN3-204ENST00000356316 KCNK17Q96T54 332 aa10.3□□□□□ -0.76
CAPN3-204ENST00000356316 NRTNQ99748 197 aa10.3□□□□□ -0.76
CAPN3-204ENST00000356316 NDC1Q9BTX1 674 aa10.3□□□□□ -0.76
CAPN3-204ENST00000356316 ETNK1Q9HBU6 452 aa10.3□□□□□ -0.76
CAPN3-204ENST00000356316 MLXIPLQ9NP71 852 aa10.3□□□□□ -0.76
CAPN3-204ENST00000356316 GPR83Q9NYM4 423 aa10.3□□□□□ -0.76
CAPN3-204ENST00000356316 MAP10Q9P2G4 905 aa10.3□□□□□ -0.76
CAPN3-204ENST00000356316 IFT80Q9P2H3 777 aaPredicted RBP10.3□□□□□ -0.76
CAPN3-204ENST00000356316 IMPACTQ9P2X3 320 aa10.3□□□□□ -0.76
CAPN3-204ENST00000356316 ICKQ9UPZ9 632 aa10.3□□□□□ -0.76
CAPN3-204ENST00000356316 R3HDM2Q9Y2K5 976 aaKnown RBP10.3□□□□□ -0.76
CAPN3-204ENST00000356316 PRSS21Q9Y6M0 314 aa10.3□□□□□ -0.76
CAPN3-204ENST00000356316 HECTD1Q9ULT8 2610 aa10.29□□□□□ -0.76
CAPN3-204ENST00000356316 RELNP78509 3460 aa10.29□□□□□ -0.76
CAPN3-204ENST00000356316 A0A0J9YY10 115 aa10.29□□□□□ -0.76
CAPN3-204ENST00000356316 TCRBV7S2A1N4TA0A589 114 aa10.29□□□□□ -0.76
CAPN3-204ENST00000356316 SLC5A10A0PJK1 596 aa10.29□□□□□ -0.76
CAPN3-204ENST00000356316 OR51F1A6NGY5 319 aa10.29□□□□□ -0.76
CAPN3-204ENST00000356316 GOT2P00505 430 aaKnown RBP10.29□□□□□ -0.76
CAPN3-204ENST00000356316 APOA4P06727 396 aa10.29□□□□□ -0.76
CAPN3-204ENST00000356316 GP1BBP13224 206 aa10.29□□□□□ -0.76
CAPN3-204ENST00000356316 PSMA3P25788 255 aa10.29□□□□□ -0.76
CAPN3-204ENST00000356316 ACADLP28330 430 aa10.29□□□□□ -0.76
CAPN3-204ENST00000356316 FOLR3P41439 243 aa10.29□□□□□ -0.76
CAPN3-204ENST00000356316 DCDP81605 110 aaKnown RBP10.29□□□□□ -0.76
CAPN3-204ENST00000356316 SRSF1Q07955 248 aaKnown RBP eCLIP10.29□□□□□ -0.76
CAPN3-204ENST00000356316 HSPA14Q0VDF9 509 aa10.29□□□□□ -0.76
CAPN3-204ENST00000356316 SSPNQ14714 243 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms