RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 CYP11A1P05108 521 aa16.97■□□□□ 0.31
COL27A1-201ENST00000356083 PVALBP20472 110 aaPredicted RBP16.97■□□□□ 0.31
COL27A1-201ENST00000356083 DNAJA1P31689 397 aaKnown RBP16.97■□□□□ 0.31
COL27A1-201ENST00000356083 CDH12P55289 794 aa16.97■□□□□ 0.31
COL27A1-201ENST00000356083 WNT3AP56704 352 aa16.97■□□□□ 0.31
COL27A1-201ENST00000356083 SCGB2A2Q13296 93 aa16.97■□□□□ 0.31
COL27A1-201ENST00000356083 ARSIQ5FYB1 569 aa16.97■□□□□ 0.31
COL27A1-201ENST00000356083 NYAP1Q6ZVC0 841 aa16.97■□□□□ 0.31
COL27A1-201ENST00000356083 ANKHQ9HCJ1 492 aa16.97■□□□□ 0.31
COL27A1-201ENST00000356083 FCF1Q9Y324 198 aaKnown RBP16.97■□□□□ 0.31
COL27A1-201ENST00000356083 PLATP00750 562 aa16.97■□□□□ 0.31
COL27A1-201ENST00000356083 FGF1P05230 155 aa16.97■□□□□ 0.31
COL27A1-201ENST00000356083 MPIP34949 423 aa16.97■□□□□ 0.31
COL27A1-201ENST00000356083 ACTR1AP61163 376 aa16.97■□□□□ 0.31
COL27A1-201ENST00000356083 CDK18Q07002 472 aa16.97■□□□□ 0.31
COL27A1-201ENST00000356083 GLYATQ6IB77 296 aa16.97■□□□□ 0.31
COL27A1-201ENST00000356083 HDAC7Q8WUI4 952 aa16.97■□□□□ 0.31
COL27A1-201ENST00000356083 SLC38A4Q969I6 547 aa16.97■□□□□ 0.31
COL27A1-201ENST00000356083 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.97■□□□□ 0.316e-7■■■□□ 15.7
COL27A1-201ENST00000356083 PORCNQ9H237 461 aa16.97■□□□□ 0.31
COL27A1-201ENST00000356083 BLOC1S5-TXNDC5H3BN57 136 aa16.97■□□□□ 0.31
COL27A1-201ENST00000356083 CDC7O00311 574 aa16.97■□□□□ 0.31
COL27A1-201ENST00000356083 TGFB1P01137 390 aa16.97■□□□□ 0.31
COL27A1-201ENST00000356083 PLEKHG6Q3KR16 790 aa16.97■□□□□ 0.31
COL27A1-201ENST00000356083 VPS26BQ4G0F5 336 aa16.97■□□□□ 0.31
COL27A1-201ENST00000356083 ATAD1Q8NBU5 361 aa16.97■□□□□ 0.31
COL27A1-201ENST00000356083 CEP76Q8TAP6 659 aa16.97■□□□□ 0.31
COL27A1-201ENST00000356083 LRMDAQ9H2I8 198 aa16.97■□□□□ 0.31
COL27A1-201ENST00000356083 C14orf166Q9Y224 244 aaKnown RBP16.97■□□□□ 0.31
COL27A1-201ENST00000356083 PCDHGC4Q9Y5F7 938 aa16.97■□□□□ 0.31
COL27A1-201ENST00000356083 UGT2B11O75310 529 aa16.97■□□□□ 0.31
COL27A1-201ENST00000356083 IFNA21P01568 189 aa16.97■□□□□ 0.31
COL27A1-201ENST00000356083 GNAO1P09471 354 aa16.97■□□□□ 0.31
COL27A1-201ENST00000356083 RPL10P27635 214 aaKnown RBP16.97■□□□□ 0.31
COL27A1-201ENST00000356083 XKRXQ6PP77 449 aa16.97■□□□□ 0.31
COL27A1-201ENST00000356083 OR5T1Q8NG75 326 aa16.97■□□□□ 0.31
COL27A1-201ENST00000356083 EZH1Q92800 747 aaPredicted RBP16.97■□□□□ 0.31
COL27A1-201ENST00000356083 OTUB2Q96DC9 234 aa16.97■□□□□ 0.31
COL27A1-201ENST00000356083 ERMAPQ96PL5 475 aaPredicted RBP16.97■□□□□ 0.31
COL27A1-201ENST00000356083 KCNN3Q9UGI6 736 aa16.97■□□□□ 0.31
COL27A1-201ENST00000356083 A0A1W2PPL8 197 aa16.97■□□□□ 0.31
COL27A1-201ENST00000356083 CLRN1P58418 232 aa16.97■□□□□ 0.31
COL27A1-201ENST00000356083 MAMLD1Q13495 774 aa16.97■□□□□ 0.31
COL27A1-201ENST00000356083 TCAIMQ8N3R3 496 aa16.97■□□□□ 0.31
COL27A1-201ENST00000356083 ANKRD52Q8NB46 1076 aa16.97■□□□□ 0.31
COL27A1-201ENST00000356083 MIOSQ9NXC5 875 aa16.97■□□□□ 0.31
COL27A1-201ENST00000356083 WASF3Q9UPY6 502 aa16.97■□□□□ 0.31
COL27A1-201ENST00000356083 A0A1B0GVT2 93 aa16.97■□□□□ 0.31
COL27A1-201ENST00000356083 MAP2K5Q13163 448 aa16.97■□□□□ 0.31
COL27A1-201ENST00000356083 TTLL10Q6ZVT0 673 aa16.97■□□□□ 0.31
COL27A1-201ENST00000356083 MON1AQ86VX9 555 aa16.97■□□□□ 0.31
COL27A1-201ENST00000356083 TMEM126BQ8IUX1 230 aa16.97■□□□□ 0.31
COL27A1-201ENST00000356083 PNPOQ9NVS9 261 aa16.97■□□□□ 0.31
COL27A1-201ENST00000356083 SCN2AQ99250 2005 aa16.97■□□□□ 0.31
COL27A1-201ENST00000356083 CIB4A0PJX0 185 aa16.96■□□□□ 0.31
COL27A1-201ENST00000356083 MEN1O00255 615 aa16.96■□□□□ 0.31
COL27A1-201ENST00000356083 FABP3P05413 133 aa16.96■□□□□ 0.31
COL27A1-201ENST00000356083 RPL17P18621 184 aaKnown RBP16.96■□□□□ 0.31
COL27A1-201ENST00000356083 EDNRAP25101 427 aa16.96■□□□□ 0.31
COL27A1-201ENST00000356083 CARD17Q5XLA6 110 aa16.96■□□□□ 0.31
COL27A1-201ENST00000356083 NAPRTQ6XQN6 538 aa16.96■□□□□ 0.31
COL27A1-201ENST00000356083 RIT1Q92963 219 aa16.96■□□□□ 0.31
COL27A1-201ENST00000356083 KIAA1143Q96AT1 154 aaPredicted RBP16.96■□□□□ 0.31
COL27A1-201ENST00000356083 C16orf58Q96GQ5 468 aa16.96■□□□□ 0.31
COL27A1-201ENST00000356083 CIB1Q99828 191 aa16.96■□□□□ 0.31
COL27A1-201ENST00000356083 TMED9Q9BVK6 235 aa16.96■□□□□ 0.31
COL27A1-201ENST00000356083 TTTY10Q9BZA0 68 aa16.96■□□□□ 0.31
COL27A1-201ENST00000356083 MED11Q9P086 117 aa16.96■□□□□ 0.31
COL27A1-201ENST00000356083 DAPL1A0PJW8 107 aa16.96■□□□□ 0.31
COL27A1-201ENST00000356083 EML1O00423 815 aa16.96■□□□□ 0.31
COL27A1-201ENST00000356083 CREB5Q02930 508 aa16.96■□□□□ 0.31
COL27A1-201ENST00000356083 ILF2Q12905 390 aaKnown RBP16.96■□□□□ 0.31
COL27A1-201ENST00000356083 KCTD9Q7L273 389 aa16.96■□□□□ 0.31
COL27A1-201ENST00000356083 MMAAQ8IVH4 418 aaKnown RBP16.96■□□□□ 0.31
COL27A1-201ENST00000356083 OXR1Q8N573 874 aa16.96■□□□□ 0.31
COL27A1-201ENST00000356083 OR5J2Q8NH18 312 aa16.96■□□□□ 0.31
COL27A1-201ENST00000356083 RNF157Q96PX1 679 aa16.96■□□□□ 0.31
COL27A1-201ENST00000356083 ARHGEF4Q9NR80 690 aa16.96■□□□□ 0.31
COL27A1-201ENST00000356083 PITPNM1O00562 1244 aa16.96■□□□□ 0.31
COL27A1-201ENST00000356083 PRAMEF12O95522 483 aa16.96■□□□□ 0.31
COL27A1-201ENST00000356083 CRYBB1P53674 252 aaPredicted RBP16.96■□□□□ 0.31
COL27A1-201ENST00000356083 HERV-K104P61576 105 aa16.96■□□□□ 0.31
COL27A1-201ENST00000356083 PRPF38BQ5VTL8 546 aaKnown RBP16.96■□□□□ 0.31
COL27A1-201ENST00000356083 AMZ2Q86W34 360 aa16.96■□□□□ 0.31
COL27A1-201ENST00000356083 RIOK2Q9BVS4 552 aaKnown RBP16.96■□□□□ 0.31
COL27A1-201ENST00000356083 PLA2G12BQ9BX93 195 aa16.96■□□□□ 0.31
COL27A1-201ENST00000356083 TVP23BQ9NYZ1 205 aa16.96■□□□□ 0.31
COL27A1-201ENST00000356083 CYTH4Q9UIA0 394 aa16.96■□□□□ 0.31
COL27A1-201ENST00000356083 FBXO5Q9UKT4 447 aa16.96■□□□□ 0.31
COL27A1-201ENST00000356083 TRIM64CA6NLI5 447 aa16.96■□□□□ 0.31
COL27A1-201ENST00000356083 HOXB8P17481 243 aaPredicted RBP16.96■□□□□ 0.31
COL27A1-201ENST00000356083 GBX2P52951 348 aaPredicted RBP16.96■□□□□ 0.31
COL27A1-201ENST00000356083 MTFR2Q6P444 385 aa16.96■□□□□ 0.31
COL27A1-201ENST00000356083 ZFPM1Q8IX07 1006 aa16.96■□□□□ 0.31
COL27A1-201ENST00000356083 TRMT2AQ8IZ69 625 aaKnown RBP16.96■□□□□ 0.31
COL27A1-201ENST00000356083 YIPF7Q8N8F6 280 aa16.96■□□□□ 0.31
COL27A1-201ENST00000356083 EURLQ9NYK6 297 aa16.96■□□□□ 0.31
COL27A1-201ENST00000356083 TMEM11P17152 192 aa16.96■□□□□ 0.31
COL27A1-201ENST00000356083 GNRHRP30968 328 aa16.96■□□□□ 0.31
COL27A1-201ENST00000356083 SRYQ05066 204 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms