RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 GSTA1P08263 222 aa6.87□□□□□ -1.31
VPS13A-201ENST00000355766 CKMT1AP12532 417 aa6.87□□□□□ -1.31
VPS13A-201ENST00000355766 RBMS1P29558 406 aaKnown RBP6.87□□□□□ -1.31
VPS13A-201ENST00000355766 HLA-FP30511 346 aa6.87□□□□□ -1.31
VPS13A-201ENST00000355766 SPRP35270 261 aaPredicted RBP6.87□□□□□ -1.31
VPS13A-201ENST00000355766 ACVRL1P37023 503 aa6.87□□□□□ -1.31
VPS13A-201ENST00000355766 SLC26A3P40879 764 aa6.87□□□□□ -1.31
VPS13A-201ENST00000355766 CD86P42081 329 aa6.87□□□□□ -1.31
VPS13A-201ENST00000355766 GRIA1P42261 906 aa6.87□□□□□ -1.31
VPS13A-201ENST00000355766 LIMK2P53671 638 aa6.87□□□□□ -1.31
VPS13A-201ENST00000355766 SESN2P58004 480 aaPredicted RBP6.87□□□□□ -1.31
VPS13A-201ENST00000355766 ARF5P84085 180 aa6.87□□□□□ -1.31
VPS13A-201ENST00000355766 PRR5P85299 388 aa6.87□□□□□ -1.31
VPS13A-201ENST00000355766 CDK18Q07002 472 aa6.87□□□□□ -1.31
VPS13A-201ENST00000355766 SPARCL1Q14515 664 aa6.87□□□□□ -1.31
VPS13A-201ENST00000355766 TMED2Q15363 201 aa6.87□□□□□ -1.31
VPS13A-201ENST00000355766 INSCQ1MX18 579 aa6.87□□□□□ -1.31
VPS13A-201ENST00000355766 UBAP2Q5T6F2 1119 aaKnown RBP6.87□□□□□ -1.31
VPS13A-201ENST00000355766 RNF219Q5W0B1 726 aaPredicted RBP6.87□□□□□ -1.31
VPS13A-201ENST00000355766 LEKR1Q6ZMV7 388 aa6.87□□□□□ -1.31
VPS13A-201ENST00000355766 B4GALNT4Q76KP1 1039 aa6.87□□□□□ -1.31
VPS13A-201ENST00000355766 KIAA0907Q7Z7F0 614 aaPredicted RBP6.87□□□□□ -1.31
VPS13A-201ENST00000355766 CLEC14AQ86T13 490 aa6.87□□□□□ -1.31
VPS13A-201ENST00000355766 KCNMB4Q86W47 210 aa6.87□□□□□ -1.31
VPS13A-201ENST00000355766 LSRQ86X29 649 aaPredicted RBP6.87□□□□□ -1.31
VPS13A-201ENST00000355766 ZNF354CQ86Y25 554 aa6.87□□□□□ -1.31
VPS13A-201ENST00000355766 CTAGE3PQ8IX95 158 aa6.87□□□□□ -1.31
VPS13A-201ENST00000355766 RAVER1Q8IY67 606 aaKnown RBP6.87□□□□□ -1.31
VPS13A-201ENST00000355766 SRRM1Q8IYB3 904 aaKnown RBP6.87□□□□□ -1.31
VPS13A-201ENST00000355766 AHI1Q8N157 1196 aa6.87□□□□□ -1.31
VPS13A-201ENST00000355766 BANPQ8N9N5 519 aa6.87□□□□□ -1.31
VPS13A-201ENST00000355766 OR4C6Q8NH72 309 aa6.87□□□□□ -1.31
VPS13A-201ENST00000355766 BRSK1Q8TDC3 778 aa6.87□□□□□ -1.31
VPS13A-201ENST00000355766 GANCQ8TET4 914 aa6.87□□□□□ -1.31
VPS13A-201ENST00000355766 DDI1Q8WTU0 396 aa6.87□□□□□ -1.31
VPS13A-201ENST00000355766 ZNF669Q96BR6 464 aaPredicted RBP6.87□□□□□ -1.31
VPS13A-201ENST00000355766 MYEOVQ96EZ4 313 aa6.87□□□□□ -1.31
VPS13A-201ENST00000355766 CFAP36Q96G28 342 aa6.87□□□□□ -1.31
VPS13A-201ENST00000355766 APOPT1Q96IL0 206 aa6.87□□□□□ -1.31
VPS13A-201ENST00000355766 LMLNQ96KR4 655 aa6.87□□□□□ -1.31
VPS13A-201ENST00000355766 CCNL2Q96S94 520 aaPredicted RBP6.87□□□□□ -1.31
VPS13A-201ENST00000355766 SEMA3CQ99985 751 aa6.87□□□□□ -1.31
VPS13A-201ENST00000355766 MCMBPQ9BTE3 642 aa6.87□□□□□ -1.31
VPS13A-201ENST00000355766 FICDQ9BVA6 458 aa6.87□□□□□ -1.31
VPS13A-201ENST00000355766 NSRP1Q9H0G5 558 aaKnown RBP6.87□□□□□ -1.31
VPS13A-201ENST00000355766 EPN3Q9H201 632 aa6.87□□□□□ -1.31
VPS13A-201ENST00000355766 RHOJQ9H4E5 214 aa6.87□□□□□ -1.31
VPS13A-201ENST00000355766 INTS9Q9NV88 658 aaKnown RBP6.87□□□□□ -1.31
VPS13A-201ENST00000355766 FBXL12Q9NXK8 326 aa6.87□□□□□ -1.31
VPS13A-201ENST00000355766 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.87□□□□□ -1.31
VPS13A-201ENST00000355766 VPS51Q9UID3 782 aa6.87□□□□□ -1.31
VPS13A-201ENST00000355766 GGA2Q9UJY4 613 aa6.87□□□□□ -1.31
VPS13A-201ENST00000355766 PLA2G4CQ9UP65 541 aa6.87□□□□□ -1.31
VPS13A-201ENST00000355766 PCDHGA8Q9Y5G5 932 aa6.87□□□□□ -1.31
VPS13A-201ENST00000355766 TP53BP1Q12888 1972 aaPredicted RBP6.87□□□□□ -1.31
VPS13A-201ENST00000355766 TEP1Q99973 2627 aaKnown RBP6.87□□□□□ -1.31
VPS13A-201ENST00000355766 MYLKQ15746 1914 aa6.86□□□□□ -1.31
VPS13A-201ENST00000355766 ZC3H12DA2A288 527 aaKnown RBP6.86□□□□□ -1.31
VPS13A-201ENST00000355766 SMIM23A6NLE4 172 aa6.86□□□□□ -1.31
VPS13A-201ENST00000355766 POC1B-GALNT4F8VUJ3 575 aa6.86□□□□□ -1.31
VPS13A-201ENST00000355766 KLF11O14901 512 aa6.86□□□□□ -1.31
VPS13A-201ENST00000355766 MID1O15344 667 aa6.86□□□□□ -1.31
VPS13A-201ENST00000355766 LATO43561 262 aa6.86□□□□□ -1.31
VPS13A-201ENST00000355766 MAGEC1O60732 1142 aa6.86□□□□□ -1.31
VPS13A-201ENST00000355766 PMPCBO75439 489 aa6.86□□□□□ -1.31
VPS13A-201ENST00000355766 BANF1O75531 89 aa6.86□□□□□ -1.31
VPS13A-201ENST00000355766 RNASEH2AO75792 299 aaKnown RBP6.86□□□□□ -1.31
VPS13A-201ENST00000355766 TMCC1O94876 653 aa6.86□□□□□ -1.31
VPS13A-201ENST00000355766 SNUPNO95149 360 aaKnown RBP6.86□□□□□ -1.31
VPS13A-201ENST00000355766 ASMTLO95671 621 aa6.86□□□□□ -1.31
VPS13A-201ENST00000355766 MT-CYBP00156 380 aaPredicted RBP6.86□□□□□ -1.31
VPS13A-201ENST00000355766 MT-ND3P03897 115 aa6.86□□□□□ -1.31
VPS13A-201ENST00000355766 PLA2G1BP04054 148 aaKnown RBP6.86□□□□□ -1.31
VPS13A-201ENST00000355766 APOA4P06727 396 aa6.86□□□□□ -1.31
VPS13A-201ENST00000355766 DLDP09622 509 aaKnown RBP6.86□□□□□ -1.31
VPS13A-201ENST00000355766 DHRS4L1P0CG22 281 aa6.86□□□□□ -1.31
VPS13A-201ENST00000355766 SFTPCP11686 197 aa6.86□□□□□ -1.31
VPS13A-201ENST00000355766 PABPC1P11940 636 aaKnown RBP6.86□□□□□ -1.31
VPS13A-201ENST00000355766 COL6A2P12110 1019 aa6.86□□□□□ -1.31
VPS13A-201ENST00000355766 CHN1P15882 459 aa6.86□□□□□ -1.31
VPS13A-201ENST00000355766 KRT4P19013 534 aa6.86□□□□□ -1.31
VPS13A-201ENST00000355766 NFKBIAP25963 317 aa6.86□□□□□ -1.31
VPS13A-201ENST00000355766 CRHR1P34998 444 aa6.86□□□□□ -1.31
VPS13A-201ENST00000355766 ARCN1P48444 511 aaKnown RBP6.86□□□□□ -1.31
VPS13A-201ENST00000355766 SERPINB8P50452 374 aa6.86□□□□□ -1.31
VPS13A-201ENST00000355766 ADPRHP54922 357 aa6.86□□□□□ -1.31
VPS13A-201ENST00000355766 SLURP1P55000 103 aa6.86□□□□□ -1.31
VPS13A-201ENST00000355766 PPP2CBP62714 309 aa6.86□□□□□ -1.31
VPS13A-201ENST00000355766 GNGT1P63211 74 aa6.86□□□□□ -1.31
VPS13A-201ENST00000355766 PPP2CAP67775 309 aa6.86□□□□□ -1.31
VPS13A-201ENST00000355766 POU4F1Q01851 419 aa6.86□□□□□ -1.31
VPS13A-201ENST00000355766 DSC2Q02487 901 aa6.86□□□□□ -1.31
VPS13A-201ENST00000355766 OVGP1Q12889 678 aa6.86□□□□□ -1.31
VPS13A-201ENST00000355766 MSLNQ13421 630 aaPredicted RBP6.86□□□□□ -1.31
VPS13A-201ENST00000355766 CST6Q15828 149 aa6.86□□□□□ -1.31
VPS13A-201ENST00000355766 SKIDA1Q1XH10 827 aa6.86□□□□□ -1.31
VPS13A-201ENST00000355766 ISXQ2M1V0 245 aa6.86□□□□□ -1.31
VPS13A-201ENST00000355766 RNF187Q5TA31 235 aaPredicted RBP6.86□□□□□ -1.31
VPS13A-201ENST00000355766 MBLAC2Q68D91 279 aa6.86□□□□□ -1.31
VPS13A-201ENST00000355766 TRMT10BQ6PF06 316 aaKnown RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms