RNA–Protein interactions for RNA: ENST00000355765.10

PRPF39-201, Transcript of pre-mRNA processing factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF39, Length 2,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-201ENST00000355765 SLC13A3Q8WWT9 602 aa18.52■□□□□ 0.56
PRPF39-201ENST00000355765 FUBP1Q96AE4 644 aaKnown RBP18.52■□□□□ 0.56
PRPF39-201ENST00000355765 CDCA5Q96FF9 252 aa18.52■□□□□ 0.56
PRPF39-201ENST00000355765 PDLIM5Q96HC4 596 aaKnown RBP18.52■□□□□ 0.56
PRPF39-201ENST00000355765 SPATA17Q96L03 361 aa18.52■□□□□ 0.56
PRPF39-201ENST00000355765 SGIP1Q9BQI5 828 aa18.52■□□□□ 0.56
PRPF39-201ENST00000355765 SPATC1LQ9H0A9 340 aa18.52■□□□□ 0.56
PRPF39-201ENST00000355765 SLC6A13Q9NSD5 602 aa18.52■□□□□ 0.56
PRPF39-201ENST00000355765 KCNH4Q9UQ05 1017 aa18.52■□□□□ 0.56
PRPF39-201ENST00000355765 DOCK1Q14185 1865 aa18.52■□□□□ 0.56
PRPF39-201ENST00000355765 GOLGA8CPA6NN73 597 aa18.52■□□□□ 0.56
PRPF39-201ENST00000355765 EVPLLA8MZ36 301 aa18.52■□□□□ 0.56
PRPF39-201ENST00000355765 ARNTLO00327 626 aa18.52■□□□□ 0.56
PRPF39-201ENST00000355765 TFECO14948 347 aaPredicted RBP18.52■□□□□ 0.56
PRPF39-201ENST00000355765 SEMA3DO95025 777 aa18.52■□□□□ 0.56
PRPF39-201ENST00000355765 ZNF682O95780 498 aa18.52■□□□□ 0.56
PRPF39-201ENST00000355765 P2RX3P56373 397 aa18.52■□□□□ 0.56
PRPF39-201ENST00000355765 TIGD6Q17RP2 521 aa18.52■□□□□ 0.56
PRPF39-201ENST00000355765 LRRC26Q2I0M4 334 aa18.52■□□□□ 0.56
PRPF39-201ENST00000355765 ZC3H12BQ5HYM0 836 aaKnown RBP18.52■□□□□ 0.56
PRPF39-201ENST00000355765 C11orf74Q86VG3 221 aa18.52■□□□□ 0.56
PRPF39-201ENST00000355765 ZDHHC21Q8IVQ6 265 aa18.52■□□□□ 0.56
PRPF39-201ENST00000355765 PEX5LQ8IYB4 626 aa18.52■□□□□ 0.56
PRPF39-201ENST00000355765 DNASE1L2Q92874 299 aa18.52■□□□□ 0.56
PRPF39-201ENST00000355765 APOL4Q9BPW4 351 aa18.52■□□□□ 0.56
PRPF39-201ENST00000355765 CHCHD6Q9BRQ6 235 aa18.52■□□□□ 0.56
PRPF39-201ENST00000355765 SLC25A51Q9H1U9 297 aa18.52■□□□□ 0.56
PRPF39-201ENST00000355765 NYNRINQ9P2P1 1898 aaKnown RBP18.52■□□□□ 0.55
PRPF39-201ENST00000355765 KRT87PA6NCN2 255 aa18.52■□□□□ 0.55
PRPF39-201ENST00000355765 MROH6A6NGR9 719 aa18.52■□□□□ 0.55
PRPF39-201ENST00000355765 J3KR12 359 aa18.52■□□□□ 0.55
PRPF39-201ENST00000355765 LDB2O43679 373 aa18.52■□□□□ 0.55
PRPF39-201ENST00000355765 CAPN1P07384 714 aa18.52■□□□□ 0.55
PRPF39-201ENST00000355765 CNPP09543 421 aaKnown RBP18.52■□□□□ 0.55
PRPF39-201ENST00000355765 PPP3CCP48454 512 aa18.52■□□□□ 0.55
PRPF39-201ENST00000355765 PRKCDQ05655 676 aa18.52■□□□□ 0.55
PRPF39-201ENST00000355765 TP53BP2Q13625 1128 aa18.52■□□□□ 0.55
PRPF39-201ENST00000355765 AP5B1Q2VPB7 878 aa18.52■□□□□ 0.55
PRPF39-201ENST00000355765 C18orf21Q32NC0 220 aaPredicted RBP18.52■□□□□ 0.55
PRPF39-201ENST00000355765 SV2CQ496J9 727 aa18.52■□□□□ 0.55
PRPF39-201ENST00000355765 GALNT10Q86SR1 603 aa18.52■□□□□ 0.55
PRPF39-201ENST00000355765 RIOX2Q8IUF8 465 aa18.52■□□□□ 0.55
PRPF39-201ENST00000355765 OR56A4Q8NGH8 313 aa18.52■□□□□ 0.55
PRPF39-201ENST00000355765 METTL6Q8TCB7 284 aa18.52■□□□□ 0.55
PRPF39-201ENST00000355765 GTF2H4Q92759 462 aa18.52■□□□□ 0.55
PRPF39-201ENST00000355765 PCED1BQ96HM7 432 aa18.52■□□□□ 0.55
PRPF39-201ENST00000355765 SDHCQ99643 169 aaPredicted RBP18.52■□□□□ 0.55
PRPF39-201ENST00000355765 KCNS3Q9BQ31 491 aa18.52■□□□□ 0.55
PRPF39-201ENST00000355765 TAS2R9Q9NYW1 312 aa18.52■□□□□ 0.55
PRPF39-201ENST00000355765 UXTQ9UBK9 157 aaPredicted RBP18.52■□□□□ 0.55
PRPF39-201ENST00000355765 MN1Q10571 1320 aaPredicted RBP18.51■□□□□ 0.55
PRPF39-201ENST00000355765 hCG_2039718K7EN88 272 aa18.51■□□□□ 0.55
PRPF39-201ENST00000355765 PAGE1O75459 146 aa18.51■□□□□ 0.55
PRPF39-201ENST00000355765 WBP4O75554 376 aaKnown RBP18.51■□□□□ 0.55
PRPF39-201ENST00000355765 MYCLP1P12525 358 aaPredicted RBP18.51■□□□□ 0.55
PRPF39-201ENST00000355765 UGT2B10P36537 528 aa18.51■□□□□ 0.55
PRPF39-201ENST00000355765 CYP4F2P78329 520 aa18.51■□□□□ 0.55
PRPF39-201ENST00000355765 SLC10A7Q0GE19 358 aa18.51■□□□□ 0.55
PRPF39-201ENST00000355765 MAPKAPK3Q16644 382 aa18.51■□□□□ 0.55
PRPF39-201ENST00000355765 SPANXN2Q5MJ10 180 aa18.51■□□□□ 0.55
PRPF39-201ENST00000355765 MED30Q96HR3 178 aa18.51■□□□□ 0.55
PRPF39-201ENST00000355765 AARSD1Q9BTE6 412 aaKnown RBP18.51■□□□□ 0.55
PRPF39-201ENST00000355765 CENPOQ9BU64 300 aa18.51■□□□□ 0.55
PRPF39-201ENST00000355765 TNKS2Q9H2K2 1166 aa18.51■□□□□ 0.55
PRPF39-201ENST00000355765 ARNT2Q9HBZ2 717 aa18.51■□□□□ 0.55
PRPF39-201ENST00000355765 BTBD3Q9Y2F9 522 aa18.51■□□□□ 0.55
PRPF39-201ENST00000355765 PCDHGA12O60330 932 aa18.51■□□□□ 0.55
PRPF39-201ENST00000355765 SCELO95171 688 aa18.51■□□□□ 0.55
PRPF39-201ENST00000355765 WARSP23381 471 aaKnown RBP18.51■□□□□ 0.55
PRPF39-201ENST00000355765 PIK3CGP48736 1102 aa18.51■□□□□ 0.55
PRPF39-201ENST00000355765 RPL38P63173 70 aaKnown RBP18.51■□□□□ 0.55
PRPF39-201ENST00000355765 RAP1GAP2Q684P5 730 aa18.51■□□□□ 0.55
PRPF39-201ENST00000355765 SHQ1Q6PI26 577 aaKnown RBP18.51■□□□□ 0.55
PRPF39-201ENST00000355765 ALKAL1Q6UXT8 129 aa18.51■□□□□ 0.55
PRPF39-201ENST00000355765 Q6ZPB1 254 aaPredicted RBP18.51■□□□□ 0.55
PRPF39-201ENST00000355765 EFL1Q7Z2Z2 1120 aaKnown RBP18.51■□□□□ 0.55
PRPF39-201ENST00000355765 MILR1Q7Z6M3 343 aa18.51■□□□□ 0.55
PRPF39-201ENST00000355765 OSMRQ99650 979 aa18.51■□□□□ 0.55
PRPF39-201ENST00000355765 CCNB1IP1Q9NPC3 277 aa18.51■□□□□ 0.55
PRPF39-201ENST00000355765 CPA4Q9UI42 421 aa18.51■□□□□ 0.55
PRPF39-201ENST00000355765 LOC105371267A0A1B0GV96 52 aa18.5■□□□□ 0.55
PRPF39-201ENST00000355765 H3BQ06 376 aaPredicted RBP18.5■□□□□ 0.55
PRPF39-201ENST00000355765 CTDSP2O14595 271 aa18.5■□□□□ 0.55
PRPF39-201ENST00000355765 ANKRD28O15084 1053 aa18.5■□□□□ 0.55
PRPF39-201ENST00000355765 SLC2A4P14672 509 aa18.5■□□□□ 0.55
PRPF39-201ENST00000355765 CXCR4P61073 352 aa18.5■□□□□ 0.55
PRPF39-201ENST00000355765 GPLD1P80108 840 aa18.5■□□□□ 0.55
PRPF39-201ENST00000355765 KRR1Q13601 381 aaKnown RBP18.5■□□□□ 0.55
PRPF39-201ENST00000355765 SETMARQ53H47 684 aaPredicted RBP18.5■□□□□ 0.55
PRPF39-201ENST00000355765 SPANXN4Q5MJ08 99 aa18.5■□□□□ 0.55
PRPF39-201ENST00000355765 GALNT7Q86SF2 657 aa18.5■□□□□ 0.55
PRPF39-201ENST00000355765 TP53I13Q8NBR0 393 aaPredicted RBP18.5■□□□□ 0.55
PRPF39-201ENST00000355765 CLHC1Q8NHS4 586 aa18.5■□□□□ 0.55
PRPF39-201ENST00000355765 IMP4Q96G21 291 aaKnown RBP18.5■□□□□ 0.55
PRPF39-201ENST00000355765 FCRL2Q96LA5 508 aaPredicted RBP18.5■□□□□ 0.55
PRPF39-201ENST00000355765 GPR21Q99679 349 aa18.5■□□□□ 0.55
PRPF39-201ENST00000355765 COPS4Q9BT78 406 aa18.5■□□□□ 0.55
PRPF39-201ENST00000355765 PRRG3Q9BZD7 231 aa18.5■□□□□ 0.55
PRPF39-201ENST00000355765 HEBP1Q9NRV9 189 aa18.5■□□□□ 0.55
PRPF39-201ENST00000355765 CD274Q9NZQ7 290 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms