RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 ROPN1Q9HAT0 212 aaPredicted RBP5.5□□□□□ -1.53
CD47-201ENST00000355354 RASSF1Q9NS23 344 aa5.5□□□□□ -1.53
CD47-201ENST00000355354 NCKIPSDQ9NZQ3 722 aa5.5□□□□□ -1.53
CD47-201ENST00000355354 KLHL20Q9Y2M5 609 aa5.5□□□□□ -1.53
CD47-201ENST00000355354 A0A0A0MRY4 1105 aa5.5□□□□□ -1.53
CD47-201ENST00000355354 TMEM247A6NEH6 219 aa5.5□□□□□ -1.53
CD47-201ENST00000355354 E2F3O00716 465 aa5.5□□□□□ -1.53
CD47-201ENST00000355354 VIPP01282 170 aa5.5□□□□□ -1.53
CD47-201ENST00000355354 JAK1P23458 1154 aa5.5□□□□□ -1.53
CD47-201ENST00000355354 PHBP35232 272 aa5.5□□□□□ -1.53
CD47-201ENST00000355354 LIPAP38571 399 aa5.5□□□□□ -1.53
CD47-201ENST00000355354 LIMK1P53667 647 aa5.5□□□□□ -1.53
CD47-201ENST00000355354 LIMK2P53671 638 aa5.5□□□□□ -1.53
CD47-201ENST00000355354 SETQ01105 290 aaPredicted RBP5.5□□□□□ -1.53
CD47-201ENST00000355354 GAS6Q14393 721 aa5.5□□□□□ -1.53
CD47-201ENST00000355354 SIRPB2Q5JXA9 342 aa5.5□□□□□ -1.53
CD47-201ENST00000355354 SLC30A9Q6PML9 568 aa5.5□□□□□ -1.53
CD47-201ENST00000355354 RTL10Q7L3V2 364 aa5.5□□□□□ -1.53
CD47-201ENST00000355354 LACC1Q8IV20 430 aa5.5□□□□□ -1.53
CD47-201ENST00000355354 CDYL2Q8N8U2 506 aa5.5□□□□□ -1.53
CD47-201ENST00000355354 PDPRQ8NCN5 879 aa5.5□□□□□ -1.53
CD47-201ENST00000355354 ERMNQ8TAM6 284 aa5.5□□□□□ -1.53
CD47-201ENST00000355354 ZNRF4Q8WWF5 429 aa5.5□□□□□ -1.53
CD47-201ENST00000355354 SPATA13Q96N96 652 aa5.5□□□□□ -1.53
CD47-201ENST00000355354 CLEC2DQ9UHP7 191 aa5.5□□□□□ -1.53
CD47-201ENST00000355354 CD84Q9UIB8 345 aa5.5□□□□□ -1.53
CD47-201ENST00000355354 RTCAO00442 366 aaKnown RBP5.5□□□□□ -1.53
CD47-201ENST00000355354 OR7A17O14581 309 aa5.5□□□□□ -1.53
CD47-201ENST00000355354 OR4F21O95013 312 aa5.5□□□□□ -1.53
CD47-201ENST00000355354 PDHA2P29803 388 aa5.5□□□□□ -1.53
CD47-201ENST00000355354 RPS9P46781 194 aaKnown RBP5.5□□□□□ -1.53
CD47-201ENST00000355354 VBP1P61758 197 aa5.5□□□□□ -1.53
CD47-201ENST00000355354 ROR1Q01973 937 aa5.5□□□□□ -1.53
CD47-201ENST00000355354 TRAF2Q12933 501 aa5.5□□□□□ -1.53
CD47-201ENST00000355354 DGCR6Q14129 220 aa5.5□□□□□ -1.53
CD47-201ENST00000355354 TMEM132DQ14C87 1099 aa5.5□□□□□ -1.53
CD47-201ENST00000355354 PCBP1Q15365 356 aaKnown RBP eCLIP5.5□□□□□ -1.53
CD47-201ENST00000355354 UPP1Q16831 310 aa5.5□□□□□ -1.53
CD47-201ENST00000355354 SPANXN4Q5MJ08 99 aa5.5□□□□□ -1.53
CD47-201ENST00000355354 CTSL3PQ5NE16 218 aa5.5□□□□□ -1.53
CD47-201ENST00000355354 FAM69BQ5VUD6 431 aa5.5□□□□□ -1.53
CD47-201ENST00000355354 UBE2UQ5VVX9 321 aa5.5□□□□□ -1.53
CD47-201ENST00000355354 TXNDC8Q6A555 127 aa5.5□□□□□ -1.53
CD47-201ENST00000355354 RNF144BQ7Z419 303 aa5.5□□□□□ -1.53
CD47-201ENST00000355354 ELMO2Q96JJ3 720 aa5.5□□□□□ -1.53
CD47-201ENST00000355354 GPR22Q99680 433 aa5.5□□□□□ -1.53
CD47-201ENST00000355354 TASP1Q9H6P5 420 aa5.5□□□□□ -1.53
CD47-201ENST00000355354 TBC1D13Q9NVG8 400 aa5.5□□□□□ -1.53
CD47-201ENST00000355354 CHST2Q9Y4C5 530 aa5.5□□□□□ -1.53
CD47-201ENST00000355354 PCDHB12Q9Y5F1 795 aa5.5□□□□□ -1.53
CD47-201ENST00000355354 CFAP20Q9Y6A4 193 aaKnown RBP5.5□□□□□ -1.53
CD47-201ENST00000355354 CLCA3PQ9Y6N3 262 aa5.5□□□□□ -1.53
CD47-201ENST00000355354 FFAR1O14842 300 aa5.49□□□□□ -1.53
CD47-201ENST00000355354 FRS3O43559 492 aa5.49□□□□□ -1.53
CD47-201ENST00000355354 CACNG3O60359 315 aa5.49□□□□□ -1.53
CD47-201ENST00000355354 RFPL2O75678 378 aa5.49□□□□□ -1.53
CD47-201ENST00000355354 MYCLP1P12525 358 aaPredicted RBP5.49□□□□□ -1.53
CD47-201ENST00000355354 RPS3AP61247 264 aaKnown RBP5.49□□□□□ -1.53
CD47-201ENST00000355354 CXorf57Q6NSI4 855 aaKnown RBP5.49□□□□□ -1.53
CD47-201ENST00000355354 ADGRG6Q86SQ4 1221 aa5.49□□□□□ -1.53
CD47-201ENST00000355354 WDFY1Q8IWB7 410 aa5.49□□□□□ -1.53
CD47-201ENST00000355354 SIDT2Q8NBJ9 832 aaKnown RBP5.49□□□□□ -1.53
CD47-201ENST00000355354 OR4M1Q8NGD0 313 aa5.49□□□□□ -1.53
CD47-201ENST00000355354 MAGEE2Q8TD90 523 aaPredicted RBP5.49□□□□□ -1.53
CD47-201ENST00000355354 RSAD2Q8WXG1 361 aa5.49□□□□□ -1.53
CD47-201ENST00000355354 TCEAL4Q96EI5 215 aa5.49□□□□□ -1.53
CD47-201ENST00000355354 CDHR1Q96JP9 859 aa5.49□□□□□ -1.53
CD47-201ENST00000355354 PRRX2Q99811 253 aa5.49□□□□□ -1.53
CD47-201ENST00000355354 LHX5Q9H2C1 402 aa5.49□□□□□ -1.53
CD47-201ENST00000355354 NANOGQ9H9S0 305 aa5.49□□□□□ -1.53
CD47-201ENST00000355354 DSCAML1Q8TD84 2053 aa5.49□□□□□ -1.53
CD47-201ENST00000355354 TRIM64A6NGJ6 449 aa5.49□□□□□ -1.53
CD47-201ENST00000355354 DFFAO00273 331 aa5.49□□□□□ -1.53
CD47-201ENST00000355354 GUCA1CO95843 209 aa5.49□□□□□ -1.53
CD47-201ENST00000355354 INHBAP08476 426 aa5.49□□□□□ -1.53
CD47-201ENST00000355354 ADRB1P08588 477 aa5.49□□□□□ -1.53
CD47-201ENST00000355354 SNRPAP09012 282 aaKnown RBP5.49□□□□□ -1.53
CD47-201ENST00000355354 ALDH3B2P48448 385 aa5.49□□□□□ -1.53
CD47-201ENST00000355354 SLC11A1P49279 550 aa5.49□□□□□ -1.53
CD47-201ENST00000355354 GAB1Q13480 694 aa5.49□□□□□ -1.53
CD47-201ENST00000355354 TUBB2AQ13885 445 aa5.49□□□□□ -1.53
CD47-201ENST00000355354 SIM2Q14190 667 aaPredicted RBP5.49□□□□□ -1.53
CD47-201ENST00000355354 DUSP7Q16829 419 aa5.49□□□□□ -1.53
CD47-201ENST00000355354 ERMP1Q7Z2K6 904 aa5.49□□□□□ -1.53
CD47-201ENST00000355354 SYCE1Q8N0S2 351 aa5.49□□□□□ -1.53
CD47-201ENST00000355354 APH1BQ8WW43 257 aa5.49□□□□□ -1.53
CD47-201ENST00000355354 ZSWIM3Q96MP5 696 aa5.49□□□□□ -1.53
CD47-201ENST00000355354 FYTTD1Q96QD9 318 aaKnown RBP5.49□□□□□ -1.53
CD47-201ENST00000355354 OR5M11Q96RB7 305 aa5.49□□□□□ -1.53
CD47-201ENST00000355354 TUBB2BQ9BVA1 445 aa5.49□□□□□ -1.53
CD47-201ENST00000355354 NT5C1AQ9BXI3 368 aa5.49□□□□□ -1.53
CD47-201ENST00000355354 RERGLQ9H628 205 aa5.49□□□□□ -1.53
CD47-201ENST00000355354 WDR41Q9HAD4 459 aa5.49□□□□□ -1.53
CD47-201ENST00000355354 TCF7L2Q9NQB0 619 aa5.49□□□□□ -1.53
CD47-201ENST00000355354 SPATS2LQ9NUQ6 558 aaKnown RBP5.49□□□□□ -1.53
CD47-201ENST00000355354 NCKAP5O14513 1909 aa5.49□□□□□ -1.53
CD47-201ENST00000355354 BCLAF3A2AJT9 711 aaKnown RBP5.49□□□□□ -1.53
CD47-201ENST00000355354 SH3BP5O60239 455 aa5.49□□□□□ -1.53
CD47-201ENST00000355354 FCER2P06734 321 aa5.49□□□□□ -1.53
CD47-201ENST00000355354 RPL34P49207 117 aaKnown RBP5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms