RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 ADH5P11766 374 aa12.98□□□□□ -0.33
SCN8A-202ENST00000355133 DHPSP49366 369 aaPredicted RBP12.98□□□□□ -0.33
SCN8A-202ENST00000355133 IFI44LQ53G44 452 aa12.98□□□□□ -0.33
SCN8A-202ENST00000355133 ZDHHC21Q8IVQ6 265 aa12.98□□□□□ -0.33
SCN8A-202ENST00000355133 GJD3Q8N144 294 aa12.98□□□□□ -0.33
SCN8A-202ENST00000355133 CLIP4Q8N3C7 705 aa12.98□□□□□ -0.33
SCN8A-202ENST00000355133 OR10H4Q8NGA5 316 aa12.98□□□□□ -0.33
SCN8A-202ENST00000355133 EFHD2Q96C19 240 aaPredicted RBP12.98□□□□□ -0.33
SCN8A-202ENST00000355133 GAL3ST1Q99999 423 aa12.98□□□□□ -0.33
SCN8A-202ENST00000355133 WDR12Q9GZL7 423 aaKnown RBP12.98□□□□□ -0.33
SCN8A-202ENST00000355133 AJAP1Q9UKB5 411 aaPredicted RBP12.98□□□□□ -0.33
SCN8A-202ENST00000355133 SLC30A4O14863 429 aa12.98□□□□□ -0.33
SCN8A-202ENST00000355133 PCDH7O60245 1069 aa12.98□□□□□ -0.33
SCN8A-202ENST00000355133 NOBOXO60393 691 aa12.98□□□□□ -0.33
SCN8A-202ENST00000355133 STATHP02808 62 aa12.98□□□□□ -0.33
SCN8A-202ENST00000355133 CHRM5P08912 532 aaPredicted RBP12.98□□□□□ -0.33
SCN8A-202ENST00000355133 GNSP15586 552 aa12.98□□□□□ -0.33
SCN8A-202ENST00000355133 PRMT2P55345 433 aa12.98□□□□□ -0.33
SCN8A-202ENST00000355133 NFKB2Q00653 900 aa12.98□□□□□ -0.33
SCN8A-202ENST00000355133 ING3Q9NXR8 418 aa12.98□□□□□ -0.33
SCN8A-202ENST00000355133 LGALS13Q9UHV8 139 aa12.98□□□□□ -0.33
SCN8A-202ENST00000355133 K7EPI3 171 aa12.98□□□□□ -0.33
SCN8A-202ENST00000355133 PPEF2O14830 753 aa12.98□□□□□ -0.33
SCN8A-202ENST00000355133 SLC10A7Q0GE19 358 aa12.98□□□□□ -0.33
SCN8A-202ENST00000355133 GANABQ14697 944 aaKnown RBP12.98□□□□□ -0.33
SCN8A-202ENST00000355133 PRKD1Q15139 912 aaPredicted RBP12.98□□□□□ -0.33
SCN8A-202ENST00000355133 FBXL22Q6P050 247 aa12.98□□□□□ -0.33
SCN8A-202ENST00000355133 ROPN1LQ96C74 230 aa12.98□□□□□ -0.33
SCN8A-202ENST00000355133 ZBED6CLQ96FA7 236 aaPredicted RBP12.98□□□□□ -0.33
SCN8A-202ENST00000355133 CENPNQ96H22 339 aaPredicted RBP12.98□□□□□ -0.33
SCN8A-202ENST00000355133 TBC1D17Q9HA65 648 aa12.98□□□□□ -0.33
SCN8A-202ENST00000355133 CFAP20Q9Y6A4 193 aaKnown RBP12.98□□□□□ -0.33
SCN8A-202ENST00000355133 TGFB1P01137 390 aa12.98□□□□□ -0.33
SCN8A-202ENST00000355133 ALPPP05187 535 aa12.98□□□□□ -0.33
SCN8A-202ENST00000355133 SEPHS1P49903 392 aa12.98□□□□□ -0.33
SCN8A-202ENST00000355133 PDGFRLQ15198 375 aa12.98□□□□□ -0.33
SCN8A-202ENST00000355133 TLR1Q15399 786 aa12.98□□□□□ -0.33
SCN8A-202ENST00000355133 RASSF6Q6ZTQ3 369 aa12.98□□□□□ -0.33
SCN8A-202ENST00000355133 FCRL5Q96RD9 977 aa12.98□□□□□ -0.33
SCN8A-202ENST00000355133 GPATCH1Q9BRR8 931 aaKnown RBP12.98□□□□□ -0.33
SCN8A-202ENST00000355133 NUSAP1Q9BXS6 441 aaKnown RBP12.98□□□□□ -0.33
SCN8A-202ENST00000355133 ASB3Q9Y575 518 aa12.98□□□□□ -0.33
SCN8A-202ENST00000355133 ZNF823P16415 610 aa12.97□□□□□ -0.33
SCN8A-202ENST00000355133 ACADLP28330 430 aa12.97□□□□□ -0.33
SCN8A-202ENST00000355133 CCND3P30281 292 aaPredicted RBP12.97□□□□□ -0.33
SCN8A-202ENST00000355133 TMEM214Q6NUQ4 689 aaKnown RBP12.97□□□□□ -0.33
SCN8A-202ENST00000355133 PAQR3Q6TCH7 311 aa12.97□□□□□ -0.33
SCN8A-202ENST00000355133 TRPV1Q8NER1 839 aa12.97□□□□□ -0.33
SCN8A-202ENST00000355133 OR5T3Q8NGG3 340 aa12.97□□□□□ -0.33
SCN8A-202ENST00000355133 NKD1Q969G9 470 aa12.97□□□□□ -0.33
SCN8A-202ENST00000355133 C8orf4Q9NR00 106 aa12.97□□□□□ -0.33
SCN8A-202ENST00000355133 TVP23BQ9NYZ1 205 aa12.97□□□□□ -0.33
SCN8A-202ENST00000355133 TULP3O75386 442 aa12.97□□□□□ -0.33
SCN8A-202ENST00000355133 PRDX6P30041 224 aa12.97□□□□□ -0.33
SCN8A-202ENST00000355133 PPP3R1P63098 170 aa12.97□□□□□ -0.33
SCN8A-202ENST00000355133 SLBPQ14493 270 aaKnown RBP eCLIP12.97□□□□□ -0.33
SCN8A-202ENST00000355133 ZNF311Q5JNZ3 666 aa12.97□□□□□ -0.33
SCN8A-202ENST00000355133 ADGRF1Q5T601 910 aa12.97□□□□□ -0.33
SCN8A-202ENST00000355133 PDE12Q6L8Q7 609 aaKnown RBP12.97□□□□□ -0.33
SCN8A-202ENST00000355133 NUP54Q7Z3B4 507 aa12.97□□□□□ -0.33
SCN8A-202ENST00000355133 FAM240BA0A1B0GVZ2 78 aa12.97□□□□□ -0.33
SCN8A-202ENST00000355133 ZNF879B4DU55 563 aa12.97□□□□□ -0.33
SCN8A-202ENST00000355133 TMEM150CB9EJG8 249 aa12.97□□□□□ -0.33
SCN8A-202ENST00000355133 CCR8P51685 355 aa12.97□□□□□ -0.33
SCN8A-202ENST00000355133 RPS6KA3P51812 740 aa12.97□□□□□ -0.33
SCN8A-202ENST00000355133 BNIP1Q12981 228 aa12.97□□□□□ -0.33
SCN8A-202ENST00000355133 TARDBPQ13148 414 aaKnown RBP eCLIP12.97□□□□□ -0.33
SCN8A-202ENST00000355133 NFATC2Q13469 925 aa12.97□□□□□ -0.33
SCN8A-202ENST00000355133 TSC22D1Q15714 1073 aa12.97□□□□□ -0.33
SCN8A-202ENST00000355133 IQCHQ86VS3 1027 aa12.97□□□□□ -0.33
SCN8A-202ENST00000355133 ZZZ3Q8IYH5 903 aa12.97□□□□□ -0.33
SCN8A-202ENST00000355133 BANPQ8N9N5 519 aa12.97□□□□□ -0.33
SCN8A-202ENST00000355133 FEM1AQ9BSK4 669 aa12.97□□□□□ -0.33
SCN8A-202ENST00000355133 ANKHQ9HCJ1 492 aa12.97□□□□□ -0.33
SCN8A-202ENST00000355133 PIGVQ9NUD9 493 aa12.97□□□□□ -0.33
SCN8A-202ENST00000355133 RGS17Q9UGC6 210 aaPredicted RBP12.97□□□□□ -0.33
SCN8A-202ENST00000355133 ATRNL1Q5VV63 1379 aa12.97□□□□□ -0.33
SCN8A-202ENST00000355133 NEMP2A6NFY4 417 aa12.97□□□□□ -0.33
SCN8A-202ENST00000355133 DNAJA2O60884 412 aa12.97□□□□□ -0.33
SCN8A-202ENST00000355133 TMEM63AO94886 807 aa12.97□□□□□ -0.33
SCN8A-202ENST00000355133 DHFRP00374 187 aa12.97□□□□□ -0.33
SCN8A-202ENST00000355133 GPIP06744 558 aa12.97□□□□□ -0.33
SCN8A-202ENST00000355133 PUDPQ08623 228 aa12.97□□□□□ -0.33
SCN8A-202ENST00000355133 PCBP2Q15366 365 aaKnown RBP eCLIP12.97□□□□□ -0.33
SCN8A-202ENST00000355133 RFKQ969G6 155 aa12.97□□□□□ -0.33
SCN8A-202ENST00000355133 SLC25A36Q96CQ1 311 aa12.97□□□□□ -0.33
SCN8A-202ENST00000355133 NSMCE3Q96MG7 304 aa12.97□□□□□ -0.33
SCN8A-202ENST00000355133 RAB11FIP5Q9BXF6 653 aa12.97□□□□□ -0.33
SCN8A-202ENST00000355133 ZNF282Q9UDV7 671 aaPredicted RBP12.97□□□□□ -0.33
SCN8A-202ENST00000355133 RAB26Q9ULW5 256 aa12.97□□□□□ -0.33
SCN8A-202ENST00000355133 A0A1W2PRB8 838 aa12.96□□□□□ -0.33
SCN8A-202ENST00000355133 IL1R2P27930 398 aa12.96□□□□□ -0.33
SCN8A-202ENST00000355133 ACVRL1P37023 503 aa12.96□□□□□ -0.33
SCN8A-202ENST00000355133 GRIA1P42261 906 aa12.96□□□□□ -0.33
SCN8A-202ENST00000355133 KCNQ1P51787 676 aa12.96□□□□□ -0.33
SCN8A-202ENST00000355133 SLC9B1Q4ZJI4 515 aa12.96□□□□□ -0.33
SCN8A-202ENST00000355133 SIRPB2Q5JXA9 342 aa12.96□□□□□ -0.33
SCN8A-202ENST00000355133 NCBP2-AS2Q69YL0 99 aa12.96□□□□□ -0.33
SCN8A-202ENST00000355133 LYSMD3Q7Z3D4 306 aa12.96□□□□□ -0.33
SCN8A-202ENST00000355133 C12orf42Q96LP6 360 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms