RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 KLHL22Q53GT1 634 aa5.69□□□□□ -1.5
SRGAP1-201ENST00000355086 ANKRA2Q9H9E1 313 aa5.69□□□□□ -1.5
SRGAP1-201ENST00000355086 PLLPQ9Y342 182 aa5.69□□□□□ -1.5
SRGAP1-201ENST00000355086 KCNU1A8MYU2 1149 aa5.69□□□□□ -1.5
SRGAP1-201ENST00000355086 RPLP0P05388 317 aaKnown RBP5.69□□□□□ -1.5
SRGAP1-201ENST00000355086 ADAM15Q13444 863 aa5.69□□□□□ -1.5
SRGAP1-201ENST00000355086 BLMHQ13867 455 aa5.69□□□□□ -1.5
SRGAP1-201ENST00000355086 SLC26A9Q7LBE3 791 aa5.69□□□□□ -1.5
SRGAP1-201ENST00000355086 AMZ2Q86W34 360 aa5.69□□□□□ -1.5
SRGAP1-201ENST00000355086 SLC9A9Q8IVB4 645 aa5.69□□□□□ -1.5
SRGAP1-201ENST00000355086 PPTC7Q8NI37 304 aa5.69□□□□□ -1.5
SRGAP1-201ENST00000355086 NODALQ96S42 347 aa5.69□□□□□ -1.5
SRGAP1-201ENST00000355086 LRRC19Q9H756 370 aa5.69□□□□□ -1.5
SRGAP1-201ENST00000355086 ZNF69Q9UC07 566 aa5.69□□□□□ -1.5
SRGAP1-201ENST00000355086 CLDN25C9JDP6 229 aa5.69□□□□□ -1.5
SRGAP1-201ENST00000355086 ENTPD6O75354 484 aa5.69□□□□□ -1.5
SRGAP1-201ENST00000355086 IFI44LQ53G44 452 aa5.69□□□□□ -1.5
SRGAP1-201ENST00000355086 ARSKQ6UWY0 536 aa5.69□□□□□ -1.5
SRGAP1-201ENST00000355086 CIR1Q86X95 450 aaPredicted RBP5.69□□□□□ -1.5
SRGAP1-201ENST00000355086 KCTD15Q96SI1 283 aaPredicted RBP5.69□□□□□ -1.5
SRGAP1-201ENST00000355086 TNFSF9P41273 254 aa5.69□□□□□ -1.5
SRGAP1-201ENST00000355086 CAP1Q01518 475 aa5.69□□□□□ -1.5
SRGAP1-201ENST00000355086 ARNTL2Q8WYA1 636 aa5.69□□□□□ -1.5
SRGAP1-201ENST00000355086 CNDP2Q96KP4 475 aaKnown RBP5.69□□□□□ -1.5
SRGAP1-201ENST00000355086 KCNN3Q9UGI6 736 aa5.69□□□□□ -1.5
SRGAP1-201ENST00000355086 CYTH4Q9UIA0 394 aa5.69□□□□□ -1.5
SRGAP1-201ENST00000355086 B8ZZF3 427 aa5.69□□□□□ -1.5
SRGAP1-201ENST00000355086 S100A12P80511 92 aa5.69□□□□□ -1.5
SRGAP1-201ENST00000355086 ELOAQ14241 798 aaKnown RBP5.69□□□□□ -1.5
SRGAP1-201ENST00000355086 ANKRD26P1Q6NSI1 321 aa5.69□□□□□ -1.5
SRGAP1-201ENST00000355086 ZYG11AQ6WRX3 759 aa5.69□□□□□ -1.5
SRGAP1-201ENST00000355086 P2RY8Q86VZ1 359 aa5.69□□□□□ -1.5
SRGAP1-201ENST00000355086 MKL1Q969V6 931 aa5.69□□□□□ -1.5
SRGAP1-201ENST00000355086 C8GP07360 202 aa5.69□□□□□ -1.5
SRGAP1-201ENST00000355086 PRKD1Q15139 912 aaPredicted RBP5.69□□□□□ -1.5
SRGAP1-201ENST00000355086 ZDHHC21Q8IVQ6 265 aa5.69□□□□□ -1.5
SRGAP1-201ENST00000355086 CNTD1Q8N815 330 aa5.69□□□□□ -1.5
SRGAP1-201ENST00000355086 SLC44A1Q8WWI5 657 aa5.69□□□□□ -1.5
SRGAP1-201ENST00000355086 ART4Q93070 314 aa5.69□□□□□ -1.5
SRGAP1-201ENST00000355086 DUSP9Q99956 384 aaKnown RBP5.69□□□□□ -1.5
SRGAP1-201ENST00000355086 CORO1CQ9ULV4 474 aaPredicted RBP5.69□□□□□ -1.5
SRGAP1-201ENST00000355086 TIE1P35590 1138 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 ECT2LQ008S8 904 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 PHF13Q86YI8 300 aaPredicted RBP5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 SYNPOQ8N3V7 929 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 UPF1Q92900 1129 aaKnown RBP eCLIP5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 SMPD3Q9NY59 655 aaPredicted RBP5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 EDNRAP25101 427 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 CCNFP41002 786 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 STRADAQ7RTN6 431 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 FEM1AQ9BSK4 669 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 ANKHQ9HCJ1 492 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 NOP16Q9Y3C1 178 aaKnown RBP5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 CLCN4P51793 760 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 SNTA1Q13424 505 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 NINJ1Q92982 152 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 SLC17A7Q9P2U7 560 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 QRICH2Q9H0J4 1663 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 PRORSD1PA6NEY8 169 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 GPR89AB7ZAQ6 455 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 PI15O43692 258 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 TNFP01375 233 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 C2P06681 752 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 GPR89BP0CG08 455 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 COL6A2P12110 1019 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 SLC1A2P43004 574 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 EIF1AXP47813 144 aaKnown RBP5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 LRRC32Q14392 662 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 CLEC6AQ6EIG7 209 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 ZNF280BQ86YH2 543 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 GRHL3Q8TE85 626 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 NDC1Q9BTX1 674 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 TRMT61BQ9BVS5 477 aaKnown RBP5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 MPP1Q00013 466 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 FMO1Q01740 532 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 CLEC12AQ5QGZ9 265 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 TMPRSS9Q7Z410 1059 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 TMCO6Q96DC7 493 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 SLC5A7Q9GZV3 580 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 SAP18O00422 153 aaKnown RBP5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 HERV-K104P61576 105 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 MAD2L1BPQ15013 274 aaPredicted RBP5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 FCGR1BQ92637 280 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 NELFAQ9H3P2 528 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 DNAJA1P31689 397 aaKnown RBP5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 HSD17B2P37059 387 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 SVOPLQ8N434 492 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 TUBGCP5Q96RT8 1024 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 AGAP2Q99490 1192 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 IRF2BPLQ9H1B7 796 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 ZNF8P17098 575 aaPredicted RBP5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 CRISP3P54108 245 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 PAMR1Q6UXH9 720 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 CAMK1GQ96NX5 476 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 KLRF1Q9NZS2 232 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 FARSAQ9Y285 508 aaKnown RBP5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 MAGEB17A8MXT2 336 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 OAZ2O95190 189 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms