RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 MAELQ96JY0 434 aaKnown RBP8.07□□□□□ -1.12
CD44-205ENST00000352818 LYSMD1Q96S90 227 aa8.07□□□□□ -1.12
CD44-205ENST00000352818 CCDC68Q9H2F9 335 aa8.07□□□□□ -1.12
CD44-205ENST00000352818 ZNF385DQ9H6B1 395 aa8.07□□□□□ -1.12
CD44-205ENST00000352818 SUDS3Q9H7L9 328 aaPredicted RBP8.07□□□□□ -1.12
CD44-205ENST00000352818 EML4Q9HC35 981 aaKnown RBP8.07□□□□□ -1.12
CD44-205ENST00000352818 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.07□□□□□ -1.12
CD44-205ENST00000352818 TAS2R13Q9NYV9 303 aa8.07□□□□□ -1.12
CD44-205ENST00000352818 TAS2R1Q9NYW7 299 aa8.07□□□□□ -1.12
CD44-205ENST00000352818 IL17CQ9P0M4 197 aa8.07□□□□□ -1.12
CD44-205ENST00000352818 ARMCX1Q9P291 453 aa8.07□□□□□ -1.12
CD44-205ENST00000352818 FKBPLQ9UIM3 349 aa8.07□□□□□ -1.12
CD44-205ENST00000352818 PLA2G4CQ9UP65 541 aa8.07□□□□□ -1.12
CD44-205ENST00000352818 HS3ST2Q9Y278 367 aa8.07□□□□□ -1.12
CD44-205ENST00000352818 STK38LQ9Y2H1 464 aa8.07□□□□□ -1.12
CD44-205ENST00000352818 FCF1Q9Y324 198 aaKnown RBP8.07□□□□□ -1.12
CD44-205ENST00000352818 PKP3Q9Y446 797 aa8.07□□□□□ -1.12
CD44-205ENST00000352818 PCDHGC4Q9Y5F7 938 aa8.07□□□□□ -1.12
CD44-205ENST00000352818 KIF26BQ2KJY2 2108 aa8.06□□□□□ -1.12
CD44-205ENST00000352818 TRBV5-4A0A0C4DH59 114 aa8.06□□□□□ -1.12
CD44-205ENST00000352818 A0A0J9YYE9 177 aa8.06□□□□□ -1.12
CD44-205ENST00000352818 A0A1W2PQ67 120 aa8.06□□□□□ -1.12
CD44-205ENST00000352818 SYCE1LA8MT33 242 aa8.06□□□□□ -1.12
CD44-205ENST00000352818 STX16-NPEPL1H3BU86 382 aa8.06□□□□□ -1.12
CD44-205ENST00000352818 STX16O14662 325 aa8.06□□□□□ -1.12
CD44-205ENST00000352818 YKT6O15498 198 aa8.06□□□□□ -1.12
CD44-205ENST00000352818 SDC3O75056 442 aa8.06□□□□□ -1.12
CD44-205ENST00000352818 SMIM24O75264 130 aa8.06□□□□□ -1.12
CD44-205ENST00000352818 VPS26AO75436 327 aa8.06□□□□□ -1.12
CD44-205ENST00000352818 NDUFS3O75489 264 aa8.06□□□□□ -1.12
CD44-205ENST00000352818 TNFSF15O95150 251 aa8.06□□□□□ -1.12
CD44-205ENST00000352818 TRBC1P01850 177 aa8.06□□□□□ -1.12
CD44-205ENST00000352818 ESR1P03372 595 aa8.06□□□□□ -1.12
CD44-205ENST00000352818 ENO1P06733 434 aaKnown RBP8.06□□□□□ -1.12
CD44-205ENST00000352818 PYGLP06737 847 aa8.06□□□□□ -1.12
CD44-205ENST00000352818 TPBGLP0DKB5 382 aa8.06□□□□□ -1.12
CD44-205ENST00000352818 PKMP14618 531 aaKnown RBP8.06□□□□□ -1.12
CD44-205ENST00000352818 IMPDH1P20839 514 aa8.06□□□□□ -1.12
CD44-205ENST00000352818 SERPINA4P29622 427 aa8.06□□□□□ -1.12
CD44-205ENST00000352818 MC4RP32245 332 aa8.06□□□□□ -1.12
CD44-205ENST00000352818 PPARGP37231 505 aaPredicted RBP8.06□□□□□ -1.12
CD44-205ENST00000352818 VASPP50552 380 aaPredicted RBP8.06□□□□□ -1.12
CD44-205ENST00000352818 PDX1P52945 283 aa8.06□□□□□ -1.12
CD44-205ENST00000352818 PGGT1BP53609 377 aa8.06□□□□□ -1.12
CD44-205ENST00000352818 EPHB1P54762 984 aa8.06□□□□□ -1.12
CD44-205ENST00000352818 POLE2P56282 527 aa8.06□□□□□ -1.12
CD44-205ENST00000352818 XIAPP98170 497 aa8.06□□□□□ -1.12
CD44-205ENST00000352818 SULT2A1Q06520 285 aa8.06□□□□□ -1.12
CD44-205ENST00000352818 BCL2L1Q07817 233 aa8.06□□□□□ -1.12
CD44-205ENST00000352818 PDAP1Q13442 181 aaKnown RBP8.06□□□□□ -1.12
CD44-205ENST00000352818 PEX6Q13608 980 aa8.06□□□□□ -1.12
CD44-205ENST00000352818 PTPRCAPQ14761 206 aa8.06□□□□□ -1.12
CD44-205ENST00000352818 HERC3Q15034 1050 aa8.06□□□□□ -1.12
CD44-205ENST00000352818 SLC9B1Q4ZJI4 515 aa8.06□□□□□ -1.12
CD44-205ENST00000352818 SETMARQ53H47 684 aaPredicted RBP8.06□□□□□ -1.12
CD44-205ENST00000352818 ZNF678Q5SXM1 525 aa8.06□□□□□ -1.12
CD44-205ENST00000352818 ATXN7L2Q5T6C5 722 aaPredicted RBP8.06□□□□□ -1.12
CD44-205ENST00000352818 LYPLAL1Q5VWZ2 237 aa8.06□□□□□ -1.12
CD44-205ENST00000352818 RINLQ6ZS11 566 aa8.06□□□□□ -1.12
CD44-205ENST00000352818 ISCA2Q86U28 154 aa8.06□□□□□ -1.12
CD44-205ENST00000352818 LDB1Q86U70 411 aaPredicted RBP8.06□□□□□ -1.12
CD44-205ENST00000352818 PIM3Q86V86 326 aa8.06□□□□□ -1.12
CD44-205ENST00000352818 PLPP6Q8IY26 295 aa8.06□□□□□ -1.12
CD44-205ENST00000352818 CBARPQ8N350 705 aaPredicted RBP8.06□□□□□ -1.12
CD44-205ENST00000352818 PCDH20Q8N6Y1 951 aaKnown RBP8.06□□□□□ -1.12
CD44-205ENST00000352818 OR2AP1Q8NGE2 309 aa8.06□□□□□ -1.12
CD44-205ENST00000352818 MAPK15Q8TD08 544 aa8.06□□□□□ -1.12
CD44-205ENST00000352818 KIAA1191Q96A73 305 aa8.06□□□□□ -1.12
CD44-205ENST00000352818 MCUR1Q96AQ8 359 aa8.06□□□□□ -1.12
CD44-205ENST00000352818 PTERQ96BW5 349 aa8.06□□□□□ -1.12
CD44-205ENST00000352818 BIRC8Q96P09 236 aa8.06□□□□□ -1.12
CD44-205ENST00000352818 ATOH8Q96SQ7 321 aa8.06□□□□□ -1.12
CD44-205ENST00000352818 C1QTNF3Q9BXJ4 246 aa8.06□□□□□ -1.12
CD44-205ENST00000352818 SLC2A11Q9BYW1 496 aa8.06□□□□□ -1.12
CD44-205ENST00000352818 CPEB1Q9BZB8 566 aaKnown RBP8.06□□□□□ -1.12
CD44-205ENST00000352818 ATP13A3Q9H7F0 1226 aa8.06□□□□□ -1.12
CD44-205ENST00000352818 TCF7L2Q9NQB0 619 aa8.06□□□□□ -1.12
CD44-205ENST00000352818 ZNF71Q9NQZ8 489 aaPredicted RBP8.06□□□□□ -1.12
CD44-205ENST00000352818 MARK1Q9P0L2 795 aa8.06□□□□□ -1.12
CD44-205ENST00000352818 TBC1D14Q9P2M4 693 aa8.06□□□□□ -1.12
CD44-205ENST00000352818 THAP10Q9P2Z0 257 aaPredicted RBP8.06□□□□□ -1.12
CD44-205ENST00000352818 BAIAP2L1Q9UHR4 511 aa8.06□□□□□ -1.12
CD44-205ENST00000352818 INTS6Q9UL03 887 aaKnown RBP8.06□□□□□ -1.12
CD44-205ENST00000352818 CDYLQ9Y232 598 aa8.06□□□□□ -1.12
CD44-205ENST00000352818 CRYL1Q9Y2S2 319 aa8.06□□□□□ -1.12
CD44-205ENST00000352818 MED16Q9Y2X0 877 aa8.06□□□□□ -1.12
CD44-205ENST00000352818 PPIL1Q9Y3C6 166 aa8.06□□□□□ -1.12
CD44-205ENST00000352818 ZNF469Q96JG9 3925 aaPredicted RBP8.06□□□□□ -1.12
CD44-205ENST00000352818 A0A1W2PPC4 97 aa8.05□□□□□ -1.12
CD44-205ENST00000352818 A8MUI8 341 aa8.05□□□□□ -1.12
CD44-205ENST00000352818 BUD23O43709 281 aaKnown RBP8.05□□□□□ -1.12
CD44-205ENST00000352818 ZBTB14O43829 449 aa8.05□□□□□ -1.12
CD44-205ENST00000352818 KLK8O60259 260 aa8.05□□□□□ -1.12
CD44-205ENST00000352818 ZNF821O75541 412 aaPredicted RBP8.05□□□□□ -1.12
CD44-205ENST00000352818 TM7SF2O76062 418 aa8.05□□□□□ -1.12
CD44-205ENST00000352818 SRP72O76094 671 aaKnown RBP8.05□□□□□ -1.12
CD44-205ENST00000352818 MT-CO1P00395 513 aa8.05□□□□□ -1.12
CD44-205ENST00000352818 THEGLP0DJG4 465 aa8.05□□□□□ -1.12
CD44-205ENST00000352818 CKMT1AP12532 417 aa8.05□□□□□ -1.12
CD44-205ENST00000352818 SRCP12931 536 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms