RNA–Protein interactions for RNA: ENST00000349228.8

TNFSF13-202, Transcript of TNF superfamily member 13, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13, Length 2,036 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-202ENST00000349228 COPS8Q99627 209 aa15.14■□□□□ 0.01
TNFSF13-202ENST00000349228 KCNH6Q9H252 994 aa15.14■□□□□ 0.01
TNFSF13-202ENST00000349228 HPS4Q9NQG7 708 aa15.14■□□□□ 0.01
TNFSF13-202ENST00000349228 SNX6Q9UNH7 406 aa15.14■□□□□ 0.01
TNFSF13-202ENST00000349228 TMED5Q9Y3A6 229 aa15.14■□□□□ 0.01
TNFSF13-202ENST00000349228 A0A096LPI6 279 aa15.13■□□□□ 0.01
TNFSF13-202ENST00000349228 C16orf96A6NNT2 1141 aa15.13■□□□□ 0.01
TNFSF13-202ENST00000349228 FAM220BPB1ANY3 271 aa15.13■□□□□ 0.01
TNFSF13-202ENST00000349228 G3V2T6 193 aa15.13■□□□□ 0.01
TNFSF13-202ENST00000349228 SLC16A5O15375 505 aa15.13■□□□□ 0.01
TNFSF13-202ENST00000349228 URODP06132 367 aa15.13■□□□□ 0.01
TNFSF13-202ENST00000349228 OR56A5P0C7T3 313 aa15.13■□□□□ 0.01
TNFSF13-202ENST00000349228 MPC1LP0DKB6 136 aa15.13■□□□□ 0.01
TNFSF13-202ENST00000349228 NRIP1P48552 1158 aa15.13■□□□□ 0.01
TNFSF13-202ENST00000349228 SLC7A9P82251 487 aa15.13■□□□□ 0.01
TNFSF13-202ENST00000349228 ZNF33BQ06732 778 aa15.13■□□□□ 0.01
TNFSF13-202ENST00000349228 LRIF1Q5T3J3 769 aa15.13■□□□□ 0.01
TNFSF13-202ENST00000349228 ZNF773Q6PK81 442 aa15.13■□□□□ 0.01
TNFSF13-202ENST00000349228 TBPL2Q6SJ96 375 aa15.13■□□□□ 0.01
TNFSF13-202ENST00000349228 THAP5Q7Z6K1 395 aa15.13■□□□□ 0.01
TNFSF13-202ENST00000349228 STK32CQ86UX6 486 aa15.13■□□□□ 0.01
TNFSF13-202ENST00000349228 ADHFE1Q8IWW8 467 aa15.13■□□□□ 0.01
TNFSF13-202ENST00000349228 MICU2Q8IYU8 434 aa15.13■□□□□ 0.01
TNFSF13-202ENST00000349228 SLC39A11Q8N1S5 342 aa15.13■□□□□ 0.01
TNFSF13-202ENST00000349228 LSM14AQ8ND56 463 aaKnown RBP15.13■□□□□ 0.01
TNFSF13-202ENST00000349228 FIG4Q92562 907 aa15.13■□□□□ 0.01
TNFSF13-202ENST00000349228 MRPS31Q92665 395 aaKnown RBP15.13■□□□□ 0.01
TNFSF13-202ENST00000349228 ASIC4Q96FT7 647 aa15.13■□□□□ 0.01
TNFSF13-202ENST00000349228 ITCHQ96J02 903 aa15.13■□□□□ 0.01
TNFSF13-202ENST00000349228 OR52E6Q96RD3 313 aa15.13■□□□□ 0.01
TNFSF13-202ENST00000349228 SLC22A12Q96S37 553 aa15.13■□□□□ 0.01
TNFSF13-202ENST00000349228 IL21Q9HBE4 155 aa15.13■□□□□ 0.01
TNFSF13-202ENST00000349228 LIMD1Q9UGP4 676 aa15.13■□□□□ 0.01
TNFSF13-202ENST00000349228 TSR3Q9UJK0 312 aaKnown RBP15.13■□□□□ 0.01
TNFSF13-202ENST00000349228 INVSQ9Y283 1065 aa15.13■□□□□ 0.01
TNFSF13-202ENST00000349228 TRBV5-3A0A0A0MS03 114 aa15.12■□□□□ 0.01
TNFSF13-202ENST00000349228 PABPN1LA6NDY0 278 aaKnown RBP15.12■□□□□ 0.01
TNFSF13-202ENST00000349228 CXCR6O00574 342 aa15.12■□□□□ 0.01
TNFSF13-202ENST00000349228 FFAR3O14843 346 aa15.12■□□□□ 0.01
TNFSF13-202ENST00000349228 KPNA5O15131 536 aa15.12■□□□□ 0.01
TNFSF13-202ENST00000349228 GPR42O15529 346 aa15.12■□□□□ 0.01
TNFSF13-202ENST00000349228 BCKDHAP12694 445 aa15.12■□□□□ 0.01
TNFSF13-202ENST00000349228 PFKLP17858 780 aa15.12■□□□□ 0.01
TNFSF13-202ENST00000349228 GDF5P43026 501 aa15.12■□□□□ 0.01
TNFSF13-202ENST00000349228 RPIAP49247 311 aa15.12■□□□□ 0.01
TNFSF13-202ENST00000349228 TOP3AQ13472 1001 aaPredicted RBP15.12■□□□□ 0.01
TNFSF13-202ENST00000349228 ARHGEF7Q14155 803 aa15.12■□□□□ 0.01
TNFSF13-202ENST00000349228 PTGR1Q14914 329 aa15.12■□□□□ 0.01
TNFSF13-202ENST00000349228 PLEKHG6Q3KR16 790 aa15.12■□□□□ 0.01
TNFSF13-202ENST00000349228 SPANXN4Q5MJ08 99 aa15.12■□□□□ 0.01
TNFSF13-202ENST00000349228 SPOUT1Q5T280 376 aaKnown RBP15.12■□□□□ 0.01
TNFSF13-202ENST00000349228 OTUD3Q5T2D3 398 aaPredicted RBP15.12■□□□□ 0.01
TNFSF13-202ENST00000349228 TMEM214Q6NUQ4 689 aaKnown RBP15.12■□□□□ 0.01
TNFSF13-202ENST00000349228 CRTC1Q6UUV9 634 aa15.12■□□□□ 0.01
TNFSF13-202ENST00000349228 GPR149Q86SP6 731 aa15.12■□□□□ 0.01
TNFSF13-202ENST00000349228 ZNF555Q8NEP9 628 aa15.12■□□□□ 0.01
TNFSF13-202ENST00000349228 OR10A6Q8NH74 314 aa15.12■□□□□ 0.01
TNFSF13-202ENST00000349228 EZH1Q92800 747 aaPredicted RBP15.12■□□□□ 0.01
TNFSF13-202ENST00000349228 FAM162AQ96A26 154 aa15.12■□□□□ 0.01
TNFSF13-202ENST00000349228 C12orf43Q96C57 262 aaKnown RBP15.12■□□□□ 0.01
TNFSF13-202ENST00000349228 NRBF2Q96F24 287 aa15.12■□□□□ 0.01
TNFSF13-202ENST00000349228 SLC47A1Q96FL8 570 aa15.12■□□□□ 0.01
TNFSF13-202ENST00000349228 RPL10LQ96L21 214 aaKnown RBP15.12■□□□□ 0.01
TNFSF13-202ENST00000349228 RBM4BQ9BQ04 359 aaKnown RBP15.12■□□□□ 0.01
TNFSF13-202ENST00000349228 RBM4Q9BWF3 364 aaKnown RBP15.12■□□□□ 0.01
TNFSF13-202ENST00000349228 SLC12A9Q9BXP2 914 aa15.12■□□□□ 0.01
TNFSF13-202ENST00000349228 CPEB1Q9BZB8 566 aaKnown RBP15.12■□□□□ 0.01
TNFSF13-202ENST00000349228 ACTR8Q9H981 624 aa15.12■□□□□ 0.01
TNFSF13-202ENST00000349228 POLR1BQ9H9Y6 1135 aa15.12■□□□□ 0.01
TNFSF13-202ENST00000349228 ZNF334Q9HCZ1 680 aaPredicted RBP15.12■□□□□ 0.01
TNFSF13-202ENST00000349228 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.12■□□□□ 0.01
TNFSF13-202ENST00000349228 IFT80Q9P2H3 777 aaPredicted RBP15.12■□□□□ 0.01
TNFSF13-202ENST00000349228 IGLV3-16A0A075B6K0 115 aa15.12■□□□□ 0.01
TNFSF13-202ENST00000349228 TRIM64BA6NI03 449 aa15.12■□□□□ 0.01
TNFSF13-202ENST00000349228 NOL3O60936 208 aaKnown RBP15.12■□□□□ 0.01
TNFSF13-202ENST00000349228 RECQL5O94762 991 aaPredicted RBP15.12■□□□□ 0.01
TNFSF13-202ENST00000349228 CPNE6O95741 557 aa15.12■□□□□ 0.01
TNFSF13-202ENST00000349228 CST1P01037 141 aa15.12■□□□□ 0.01
TNFSF13-202ENST00000349228 HIST1H2AGP0C0S8 130 aaPredicted RBP15.12■□□□□ 0.01
TNFSF13-202ENST00000349228 HIST1H2ADP20671 130 aa15.12■□□□□ 0.01
TNFSF13-202ENST00000349228 S100A3P33764 101 aa15.12■□□□□ 0.01
TNFSF13-202ENST00000349228 CA5AP35218 305 aa15.12■□□□□ 0.01
TNFSF13-202ENST00000349228 SOX11P35716 441 aa15.12■□□□□ 0.01
TNFSF13-202ENST00000349228 VASPP50552 380 aaPredicted RBP15.12■□□□□ 0.01
TNFSF13-202ENST00000349228 RPS14P62263 151 aaKnown RBP15.12■□□□□ 0.01
TNFSF13-202ENST00000349228 HMGCS1Q01581 520 aa15.12■□□□□ 0.01
TNFSF13-202ENST00000349228 CREMQ03060 361 aa15.12■□□□□ 0.01
TNFSF13-202ENST00000349228 LMAN2Q12907 356 aa15.12■□□□□ 0.01
TNFSF13-202ENST00000349228 SP140Q13342 867 aa15.12■□□□□ 0.01
TNFSF13-202ENST00000349228 RFX4Q33E94 735 aa15.12■□□□□ 0.01
TNFSF13-202ENST00000349228 PLA2G4EQ3MJ16 856 aa15.12■□□□□ 0.01
TNFSF13-202ENST00000349228 BROXQ5VW32 411 aa15.12■□□□□ 0.01
TNFSF13-202ENST00000349228 TXNDC8Q6A555 127 aa15.12■□□□□ 0.01
TNFSF13-202ENST00000349228 KCTD8Q6ZWB6 473 aa15.12■□□□□ 0.01
TNFSF13-202ENST00000349228 DDX53Q86TM3 631 aaKnown RBP15.12■□□□□ 0.01
TNFSF13-202ENST00000349228 CALHM3Q86XJ0 350 aa15.12■□□□□ 0.01
TNFSF13-202ENST00000349228 OFCC1Q8IZS5 231 aa15.12■□□□□ 0.01
TNFSF13-202ENST00000349228 C8orf59Q8N0T1 100 aaPredicted RBP15.12■□□□□ 0.01
TNFSF13-202ENST00000349228 TMEM132CQ8N3T6 1108 aa15.12■□□□□ 0.01
TNFSF13-202ENST00000349228 KLHL23Q8NBE8 558 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms