RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 ZNF786Q8N393 782 aa13.6□□□□□ -0.23
TRIM4-201ENST00000349062 HEPHQ9BQS7 1158 aa13.6□□□□□ -0.23
TRIM4-201ENST00000349062 MRPS26Q9BYN8 205 aaKnown RBP13.6□□□□□ -0.23
TRIM4-201ENST00000349062 PKD2L2Q9NZM6 624 aa13.6□□□□□ -0.23
TRIM4-201ENST00000349062 VPS4AQ9UN37 437 aa13.6□□□□□ -0.23
TRIM4-201ENST00000349062 SLC8A2Q9UPR5 921 aa13.6□□□□□ -0.23
TRIM4-201ENST00000349062 ERVW-1Q9UQF0 538 aa13.6□□□□□ -0.23
TRIM4-201ENST00000349062 GPR45Q9Y5Y3 372 aa13.6□□□□□ -0.23
TRIM4-201ENST00000349062 FGF4P08620 206 aa13.59□□□□□ -0.23
TRIM4-201ENST00000349062 SLC6A2P23975 617 aa13.59□□□□□ -0.23
TRIM4-201ENST00000349062 BDKRB1P46663 353 aa13.59□□□□□ -0.23
TRIM4-201ENST00000349062 SPINT3P49223 89 aa13.59□□□□□ -0.23
TRIM4-201ENST00000349062 DGKGP49619 791 aa13.59□□□□□ -0.23
TRIM4-201ENST00000349062 CLCN4P51793 760 aa13.59□□□□□ -0.23
TRIM4-201ENST00000349062 CTSCP53634 463 aa13.59□□□□□ -0.23
TRIM4-201ENST00000349062 NAA20P61599 178 aa13.59□□□□□ -0.23
TRIM4-201ENST00000349062 PRKG2Q13237 762 aa13.59□□□□□ -0.23
TRIM4-201ENST00000349062 ZIK1Q3SY52 487 aaPredicted RBP13.59□□□□□ -0.23
TRIM4-201ENST00000349062 SPANXN4Q5MJ08 99 aa13.59□□□□□ -0.23
TRIM4-201ENST00000349062 ADIPOR2Q86V24 386 aa13.59□□□□□ -0.23
TRIM4-201ENST00000349062 ZNF513Q8N8E2 541 aaPredicted RBP13.59□□□□□ -0.23
TRIM4-201ENST00000349062 CYGBQ8WWM9 190 aa13.59□□□□□ -0.23
TRIM4-201ENST00000349062 GAB3Q8WWW8 586 aa13.59□□□□□ -0.23
TRIM4-201ENST00000349062 AP2M1Q96CW1 435 aa13.59□□□□□ -0.23
TRIM4-201ENST00000349062 EGLN2Q96KS0 407 aa13.59□□□□□ -0.23
TRIM4-201ENST00000349062 RAD9AQ99638 391 aa13.59□□□□□ -0.23
TRIM4-201ENST00000349062 NRTNQ99748 197 aa13.59□□□□□ -0.23
TRIM4-201ENST00000349062 TRIM54Q9BYV2 358 aa13.59□□□□□ -0.23
TRIM4-201ENST00000349062 DPY30Q9C005 99 aa13.59□□□□□ -0.23
TRIM4-201ENST00000349062 C6orf203Q9P0P8 240 aaPredicted RBP13.59□□□□□ -0.23
TRIM4-201ENST00000349062 SARDHQ9UL12 918 aa13.59□□□□□ -0.23
TRIM4-201ENST00000349062 CNOT6Q9ULM6 557 aaKnown RBP13.59□□□□□ -0.23
TRIM4-201ENST00000349062 PDE10AQ9Y233 779 aa13.59□□□□□ -0.23
TRIM4-201ENST00000349062 SPEGQ15772 3267 aa13.59□□□□□ -0.23
TRIM4-201ENST00000349062 SAP18O00422 153 aaKnown RBP13.59□□□□□ -0.23
TRIM4-201ENST00000349062 GSTA4O15217 222 aa13.59□□□□□ -0.23
TRIM4-201ENST00000349062 TSPAN6O43657 245 aa13.59□□□□□ -0.23
TRIM4-201ENST00000349062 NRIP1P48552 1158 aa13.59□□□□□ -0.23
TRIM4-201ENST00000349062 GSK3BP49841 420 aa13.59□□□□□ -0.23
TRIM4-201ENST00000349062 NR1H2P55055 460 aa13.59□□□□□ -0.23
TRIM4-201ENST00000349062 ZNF284Q2VY69 593 aa13.59□□□□□ -0.23
TRIM4-201ENST00000349062 ADNP2Q6IQ32 1131 aa13.59□□□□□ -0.23
TRIM4-201ENST00000349062 ANGPTL8Q6UXH0 198 aa13.59□□□□□ -0.23
TRIM4-201ENST00000349062 GCNT7Q6ZNI0 430 aa13.59□□□□□ -0.23
TRIM4-201ENST00000349062 PHYKPLQ8IUZ5 450 aa13.59□□□□□ -0.23
TRIM4-201ENST00000349062 RGL4Q8IZJ4 473 aa13.59□□□□□ -0.23
TRIM4-201ENST00000349062 P2RY13Q9BPV8 354 aa13.59□□□□□ -0.23
TRIM4-201ENST00000349062 ALG2Q9H553 416 aa13.59□□□□□ -0.23
TRIM4-201ENST00000349062 SAGE1Q9NXZ1 904 aa13.59□□□□□ -0.23
TRIM4-201ENST00000349062 ZDHHC3Q9NYG2 299 aa13.59□□□□□ -0.23
TRIM4-201ENST00000349062 STOML2Q9UJZ1 356 aa13.59□□□□□ -0.23
TRIM4-201ENST00000349062 STX16O14662 325 aa13.58□□□□□ -0.23
TRIM4-201ENST00000349062 LZTS3O60299 673 aaPredicted RBP13.58□□□□□ -0.23
TRIM4-201ENST00000349062 DFNA5O60443 496 aa13.58□□□□□ -0.23
TRIM4-201ENST00000349062 MOSPD3O75425 235 aa13.58□□□□□ -0.23
TRIM4-201ENST00000349062 CTSLP07711 333 aa13.58□□□□□ -0.23
TRIM4-201ENST00000349062 MAP4P27816 1152 aaKnown RBP13.58□□□□□ -0.23
TRIM4-201ENST00000349062 ERVK-8P63133 956 aa13.58□□□□□ -0.23
TRIM4-201ENST00000349062 NAE1Q13564 534 aa13.58□□□□□ -0.23
TRIM4-201ENST00000349062 DHCR24Q15392 516 aa13.58□□□□□ -0.23
TRIM4-201ENST00000349062 FAM180BQ6P0A1 224 aa13.58□□□□□ -0.23
TRIM4-201ENST00000349062 BLOC1S3Q6QNY0 202 aa13.58□□□□□ -0.23
TRIM4-201ENST00000349062 MARVELD2Q8N4S9 558 aa13.58□□□□□ -0.23
TRIM4-201ENST00000349062 PROKR1Q8TCW9 393 aa13.58□□□□□ -0.23
TRIM4-201ENST00000349062 NXPE3Q969Y0 559 aa13.58□□□□□ -0.23
TRIM4-201ENST00000349062 PARVBQ9HBI1 364 aa13.58□□□□□ -0.23
TRIM4-201ENST00000349062 SDR39U1Q9NRG7 319 aaPredicted RBP13.58□□□□□ -0.23
TRIM4-201ENST00000349062 RSL24D1Q9UHA3 163 aaKnown RBP13.58□□□□□ -0.23
TRIM4-201ENST00000349062 OTOL1A6NHN0 477 aaPredicted RBP13.58□□□□□ -0.24
TRIM4-201ENST00000349062 K7ESM1 405 aa13.58□□□□□ -0.24
TRIM4-201ENST00000349062 ADSLP30566 484 aaPredicted RBP13.58□□□□□ -0.24
TRIM4-201ENST00000349062 OR4D2P58180 307 aa13.58□□□□□ -0.24
TRIM4-201ENST00000349062 TMEM240Q5SV17 173 aa13.58□□□□□ -0.24
TRIM4-201ENST00000349062 GALNT10Q86SR1 603 aa13.58□□□□□ -0.24
TRIM4-201ENST00000349062 MMAAQ8IVH4 418 aaKnown RBP13.58□□□□□ -0.24
TRIM4-201ENST00000349062 OR10A6Q8NH74 314 aa13.58□□□□□ -0.24
TRIM4-201ENST00000349062 GIPC3Q8TF64 312 aa13.58□□□□□ -0.24
TRIM4-201ENST00000349062 RHBDF1Q96CC6 855 aa13.58□□□□□ -0.24
TRIM4-201ENST00000349062 THAP11Q96EK4 314 aa13.58□□□□□ -0.24
TRIM4-201ENST00000349062 CD244Q9BZW8 370 aa13.58□□□□□ -0.24
TRIM4-201ENST00000349062 AIG1Q9NVV5 245 aa13.58□□□□□ -0.24
TRIM4-201ENST00000349062 RIMKLBQ9ULI2 386 aa13.58□□□□□ -0.24
TRIM4-201ENST00000349062 ZNF510Q9Y2H8 683 aa13.58□□□□□ -0.24
TRIM4-201ENST00000349062 DHRS12A0PJE2 317 aa13.58□□□□□ -0.24
TRIM4-201ENST00000349062 MMP20O60882 483 aa13.58□□□□□ -0.24
TRIM4-201ENST00000349062 SOCS5O75159 536 aa13.58□□□□□ -0.24
TRIM4-201ENST00000349062 XYLBO75191 536 aa13.58□□□□□ -0.24
TRIM4-201ENST00000349062 PDHA2P29803 388 aa13.58□□□□□ -0.24
TRIM4-201ENST00000349062 RFC2P35250 354 aa13.58□□□□□ -0.24
TRIM4-201ENST00000349062 MAPK8P45983 427 aa13.58□□□□□ -0.24
TRIM4-201ENST00000349062 MEF2AQ02078 507 aaPredicted RBP13.58□□□□□ -0.24
TRIM4-201ENST00000349062 GALNT1Q10472 559 aaPredicted RBP13.58□□□□□ -0.24
TRIM4-201ENST00000349062 ATP1A4Q13733 1029 aa13.58□□□□□ -0.24
TRIM4-201ENST00000349062 ANKDD1AQ495B1 522 aa13.58□□□□□ -0.24
TRIM4-201ENST00000349062 NANOGP8Q6NSW7 305 aa13.58□□□□□ -0.24
TRIM4-201ENST00000349062 ELMSAN1Q6PJG2 1045 aa13.58□□□□□ -0.24
TRIM4-201ENST00000349062 TRMT11Q7Z4G4 463 aaKnown RBP13.58□□□□□ -0.24
TRIM4-201ENST00000349062 KIAA2013Q8IYS2 634 aa13.58□□□□□ -0.24
TRIM4-201ENST00000349062 GANCQ8TET4 914 aa13.58□□□□□ -0.24
TRIM4-201ENST00000349062 ZBTB18Q99592 522 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms