RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 ZFHX4Q86UP3 3567 aa15.3■□□□□ 0.04
TSPAN4-201ENST00000346501 ASPMQ8IZT6 3477 aa15.3■□□□□ 0.04
TSPAN4-201ENST00000346501 PTPRQQ9UMZ3 2332 aa15.29■□□□□ 0.04
TSPAN4-201ENST00000346501 EFCAB8A8MWE9 144 aa15.29■□□□□ 0.04
TSPAN4-201ENST00000346501 ISM1B1AKI9 464 aa15.29■□□□□ 0.04
TSPAN4-201ENST00000346501 ERVH48-1M5A8F1 160 aa15.29■□□□□ 0.04
TSPAN4-201ENST00000346501 EFSO43281 561 aa15.29■□□□□ 0.04
TSPAN4-201ENST00000346501 SPAG6O75602 509 aa15.29■□□□□ 0.04
TSPAN4-201ENST00000346501 KIAA0754O94854 1291 aa15.29■□□□□ 0.04
TSPAN4-201ENST00000346501 MAGEA3P43357 314 aa15.29■□□□□ 0.04
TSPAN4-201ENST00000346501 ARL4CP56559 192 aa15.29■□□□□ 0.04
TSPAN4-201ENST00000346501 ETF1P62495 437 aaKnown RBP15.29■□□□□ 0.04
TSPAN4-201ENST00000346501 TUBB4BP68371 445 aa15.29■□□□□ 0.04
TSPAN4-201ENST00000346501 MC1RQ01726 317 aa15.29■□□□□ 0.04
TSPAN4-201ENST00000346501 TUBB2AQ13885 445 aa15.29■□□□□ 0.04
TSPAN4-201ENST00000346501 KIR2DS3Q14952 304 aa15.29■□□□□ 0.04
TSPAN4-201ENST00000346501 BBS9Q3SYG4 887 aa15.29■□□□□ 0.04
TSPAN4-201ENST00000346501 SPANXN3Q5MJ09 141 aa15.29■□□□□ 0.04
TSPAN4-201ENST00000346501 D2HGDHQ8N465 521 aa15.29■□□□□ 0.04
TSPAN4-201ENST00000346501 LSM14AQ8ND56 463 aaKnown RBP15.29■□□□□ 0.04
TSPAN4-201ENST00000346501 SNRNP27Q8WVK2 155 aaKnown RBP15.29■□□□□ 0.04
TSPAN4-201ENST00000346501 PMEPA1Q969W9 287 aa15.29■□□□□ 0.04
TSPAN4-201ENST00000346501 RAD51AP1Q96B01 352 aa15.29■□□□□ 0.04
TSPAN4-201ENST00000346501 LRRC39Q96DD0 335 aa15.29■□□□□ 0.04
TSPAN4-201ENST00000346501 SIGLEC10Q96LC7 697 aa15.29■□□□□ 0.04
TSPAN4-201ENST00000346501 ARHGAP9Q9BRR9 750 aa15.29■□□□□ 0.04
TSPAN4-201ENST00000346501 TUBB2BQ9BVA1 445 aa15.29■□□□□ 0.04
TSPAN4-201ENST00000346501 SERTAD3Q9UJW9 196 aa15.29■□□□□ 0.04
TSPAN4-201ENST00000346501 BTRCQ9Y297 605 aa15.29■□□□□ 0.04
TSPAN4-201ENST00000346501 FAM169AQ9Y6X4 670 aa15.29■□□□□ 0.04
TSPAN4-201ENST00000346501 FREM2Q5SZK8 3169 aa15.28■□□□□ 0.04
TSPAN4-201ENST00000346501 ZCWPW2A0A1B0GU75 182 aa15.28■□□□□ 0.04
TSPAN4-201ENST00000346501 SLC9B1P1A6NJY1 282 aa15.28■□□□□ 0.04
TSPAN4-201ENST00000346501 BTN3A3O00478 584 aa15.28■□□□□ 0.04
TSPAN4-201ENST00000346501 CHRM5P08912 532 aaPredicted RBP15.28■□□□□ 0.04
TSPAN4-201ENST00000346501 EBLN1P0CF75 366 aa15.28■□□□□ 0.04
TSPAN4-201ENST00000346501 FOLR1P15328 257 aa15.28■□□□□ 0.04
TSPAN4-201ENST00000346501 ATP5DP30049 168 aa15.28■□□□□ 0.04
TSPAN4-201ENST00000346501 PTGIRP43119 386 aa15.28■□□□□ 0.04
TSPAN4-201ENST00000346501 RAB28P51157 221 aa15.28■□□□□ 0.04
TSPAN4-201ENST00000346501 DHX9Q08211 1270 aaKnown RBP15.28■□□□□ 0.04
TSPAN4-201ENST00000346501 CALCOCO2Q13137 446 aa15.28■□□□□ 0.04
TSPAN4-201ENST00000346501 HIF1AQ16665 826 aa15.28■□□□□ 0.04
TSPAN4-201ENST00000346501 UGT3A1Q6NUS8 523 aa15.28■□□□□ 0.04
TSPAN4-201ENST00000346501 SPESP1Q6UW49 350 aa15.28■□□□□ 0.04
TSPAN4-201ENST00000346501 UNC5AQ6ZN44 842 aa15.28■□□□□ 0.04
TSPAN4-201ENST00000346501 KCNMB4Q86W47 210 aa15.28■□□□□ 0.04
TSPAN4-201ENST00000346501 TMEM126BQ8IUX1 230 aa15.28■□□□□ 0.04
TSPAN4-201ENST00000346501 ADGRF3Q8IZF5 1079 aa15.28■□□□□ 0.04
TSPAN4-201ENST00000346501 ZBTB2Q8N680 514 aa15.28■□□□□ 0.04
TSPAN4-201ENST00000346501 LKAAEAR1Q8TD35 194 aa15.28■□□□□ 0.04
TSPAN4-201ENST00000346501 KRT12Q99456 494 aa15.28■□□□□ 0.04
TSPAN4-201ENST00000346501 EBNA1BP2Q99848 306 aaKnown RBP15.28■□□□□ 0.04
TSPAN4-201ENST00000346501 TRIM31Q9BZY9 425 aa15.28■□□□□ 0.04
TSPAN4-201ENST00000346501 PPANQ9NQ55 473 aaKnown RBP15.28■□□□□ 0.04
TSPAN4-201ENST00000346501 FAM114A2Q9NRY5 505 aa15.28■□□□□ 0.04
TSPAN4-201ENST00000346501 INTS7Q9NVH2 962 aaKnown RBP15.28■□□□□ 0.04
TSPAN4-201ENST00000346501 PADI1Q9ULC6 663 aa15.28■□□□□ 0.04
TSPAN4-201ENST00000346501 ICKQ9UPZ9 632 aa15.28■□□□□ 0.04
TSPAN4-201ENST00000346501 PCDHB3Q9Y5E6 796 aa15.28■□□□□ 0.04
TSPAN4-201ENST00000346501 CFAP47Q6ZTR5 3102 aa15.27■□□□□ 0.04
TSPAN4-201ENST00000346501 FAM187AA6NFU0 413 aa15.27■□□□□ 0.04
TSPAN4-201ENST00000346501 ZNF891A8MT65 544 aaPredicted RBP15.27■□□□□ 0.04
TSPAN4-201ENST00000346501 TTI1O43156 1089 aa15.27■□□□□ 0.04
TSPAN4-201ENST00000346501 NIPSNAP2O75323 286 aa15.27■□□□□ 0.04
TSPAN4-201ENST00000346501 KLK3P07288 261 aaPredicted RBP15.27■□□□□ 0.04
TSPAN4-201ENST00000346501 CTBP1Q13363 440 aa15.27■□□□□ 0.04
TSPAN4-201ENST00000346501 KCNAB1Q14722 419 aa15.27■□□□□ 0.04
TSPAN4-201ENST00000346501 CRYMQ14894 314 aa15.27■□□□□ 0.04
TSPAN4-201ENST00000346501 HSP90AA5PQ58FG0 334 aa15.27■□□□□ 0.04
TSPAN4-201ENST00000346501 SYT10Q6XYQ8 523 aa15.27■□□□□ 0.04
TSPAN4-201ENST00000346501 CENPUQ71F23 418 aa15.27■□□□□ 0.04
TSPAN4-201ENST00000346501 GPR135Q8IZ08 494 aa15.27■□□□□ 0.04
TSPAN4-201ENST00000346501 TCTN2Q96GX1 697 aa15.27■□□□□ 0.04
TSPAN4-201ENST00000346501 BIRC8Q96P09 236 aa15.27■□□□□ 0.04
TSPAN4-201ENST00000346501 IL1RAPL1Q9NZN1 696 aa15.27■□□□□ 0.04
TSPAN4-201ENST00000346501 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.27■□□□□ 0.04
TSPAN4-201ENST00000346501 KCND3Q9UK17 655 aa15.27■□□□□ 0.04
TSPAN4-201ENST00000346501 FBXO5Q9UKT4 447 aa15.27■□□□□ 0.04
TSPAN4-201ENST00000346501 CDYLQ9Y232 598 aa15.27■□□□□ 0.04
TSPAN4-201ENST00000346501 PCDHGA4Q9Y5G9 962 aa15.27■□□□□ 0.04
TSPAN4-201ENST00000346501 A0A0J9YY10 115 aa15.26■□□□□ 0.03
TSPAN4-201ENST00000346501 TK2O00142 265 aa15.26■□□□□ 0.03
TSPAN4-201ENST00000346501 ATXN7O15265 892 aaPredicted RBP15.26■□□□□ 0.03
TSPAN4-201ENST00000346501 CPNE3O75131 537 aaKnown RBP15.26■□□□□ 0.03
TSPAN4-201ENST00000346501 VPS26AO75436 327 aa15.26■□□□□ 0.03
TSPAN4-201ENST00000346501 SCRG1O75711 98 aa15.26■□□□□ 0.03
TSPAN4-201ENST00000346501 DLGAP3O95886 979 aa15.26■□□□□ 0.03
TSPAN4-201ENST00000346501 S1PR4O95977 384 aa15.26■□□□□ 0.03
TSPAN4-201ENST00000346501 CATP04040 527 aaKnown RBP15.26■□□□□ 0.03
TSPAN4-201ENST00000346501 CYP2A7P20853 494 aa15.26■□□□□ 0.03
TSPAN4-201ENST00000346501 CD9P21926 228 aa15.26■□□□□ 0.03
TSPAN4-201ENST00000346501 PKLRP30613 574 aa15.26■□□□□ 0.03
TSPAN4-201ENST00000346501 ITGA8P53708 1063 aa15.26■□□□□ 0.03
TSPAN4-201ENST00000346501 CKAP4Q07065 602 aaKnown RBP15.26■□□□□ 0.03
TSPAN4-201ENST00000346501 KYNUQ16719 465 aa15.26■□□□□ 0.03
TSPAN4-201ENST00000346501 CTSL3PQ5NE16 218 aa15.26■□□□□ 0.03
TSPAN4-201ENST00000346501 CNSTQ6PJW8 725 aa15.26■□□□□ 0.03
TSPAN4-201ENST00000346501 VRK3Q8IV63 474 aa15.26■□□□□ 0.03
TSPAN4-201ENST00000346501 GALNT6Q8NCL4 622 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms