RNA–Protein interactions for RNA: ENST00000344683.9

MCPH1-201, Transcript of microcephalin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MCPH1, Length 8,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCPH1-201ENST00000344683 ZNF132P52740 706 aa8.21□□□□□ -1.1
MCPH1-201ENST00000344683 CRADDP78560 199 aa8.21□□□□□ -1.1
MCPH1-201ENST00000344683 CBX2Q14781 532 aaPredicted RBP8.21□□□□□ -1.1
MCPH1-201ENST00000344683 CRYBG2Q8N1P7 616 aa8.21□□□□□ -1.1
MCPH1-201ENST00000344683 PIAS4Q8N2W9 510 aaPredicted RBP8.21□□□□□ -1.1
MCPH1-201ENST00000344683 PHTF2Q8N3S3 785 aa8.21□□□□□ -1.1
MCPH1-201ENST00000344683 CHCHD4Q8N4Q1 142 aa8.21□□□□□ -1.1
MCPH1-201ENST00000344683 GEMIN6Q8WXD5 167 aaKnown RBP8.21□□□□□ -1.1
MCPH1-201ENST00000344683 ARL11Q969Q4 196 aa8.21□□□□□ -1.1
MCPH1-201ENST00000344683 CCDC120Q96HB5 630 aa8.21□□□□□ -1.1
MCPH1-201ENST00000344683 TMEM80Q96HE8 168 aa8.21□□□□□ -1.1
MCPH1-201ENST00000344683 CNTNAP3BQ96NU0 1288 aa8.21□□□□□ -1.1
MCPH1-201ENST00000344683 SLC5A7Q9GZV3 580 aa8.21□□□□□ -1.1
MCPH1-201ENST00000344683 SLC17A7Q9P2U7 560 aa8.21□□□□□ -1.1
MCPH1-201ENST00000344683 ZNHIT2Q9UHR6 403 aa8.21□□□□□ -1.1
MCPH1-201ENST00000344683 DNMT3LQ9UJW3 386 aa8.21□□□□□ -1.1
MCPH1-201ENST00000344683 SH2B3Q9UQQ2 575 aa8.21□□□□□ -1.1
MCPH1-201ENST00000344683 NPEPPSL1A6NEC2 478 aa8.21□□□□□ -1.1
MCPH1-201ENST00000344683 E2F3O00716 465 aa8.21□□□□□ -1.1
MCPH1-201ENST00000344683 ATP6AP2O75787 350 aa8.21□□□□□ -1.1
MCPH1-201ENST00000344683 HLA-DPB1P04440 258 aa8.21□□□□□ -1.1
MCPH1-201ENST00000344683 USP17L7P0C7H9 530 aa8.21□□□□□ -1.1
MCPH1-201ENST00000344683 MATN1P21941 496 aa8.21□□□□□ -1.1
MCPH1-201ENST00000344683 MPSTP25325 297 aa8.21□□□□□ -1.1
MCPH1-201ENST00000344683 RXRBP28702 533 aa8.21□□□□□ -1.1
MCPH1-201ENST00000344683 HSD17B2P37059 387 aa8.21□□□□□ -1.1
MCPH1-201ENST00000344683 HERV-K104P61576 105 aa8.21□□□□□ -1.1
MCPH1-201ENST00000344683 OR51D1Q8NGF3 324 aa8.21□□□□□ -1.1
MCPH1-201ENST00000344683 RPLP0P6Q8NHW5 317 aa8.21□□□□□ -1.1
MCPH1-201ENST00000344683 FNDC8Q8TC99 324 aa8.21□□□□□ -1.1
MCPH1-201ENST00000344683 CLIP3Q96DZ5 547 aa8.21□□□□□ -1.1
MCPH1-201ENST00000344683 C5orf34Q96MH7 638 aa8.21□□□□□ -1.1
MCPH1-201ENST00000344683 PCDHB12Q9Y5F1 795 aa8.21□□□□□ -1.1
MCPH1-201ENST00000344683 CREBL2O60519 120 aaPredicted RBP8.2□□□□□ -1.1
MCPH1-201ENST00000344683 IGKV5-2P06315 115 aa8.2□□□□□ -1.1
MCPH1-201ENST00000344683 SRPRAP08240 638 aaKnown RBP8.2□□□□□ -1.1
MCPH1-201ENST00000344683 ZSCAN5DPP0CG00 497 aa8.2□□□□□ -1.1
MCPH1-201ENST00000344683 RAB3BP20337 219 aa8.2□□□□□ -1.1
MCPH1-201ENST00000344683 AQP1P29972 269 aa8.2□□□□□ -1.1
MCPH1-201ENST00000344683 THPOP40225 353 aa8.2□□□□□ -1.1
MCPH1-201ENST00000344683 GTF2H2Q13888 395 aa8.2□□□□□ -1.1
MCPH1-201ENST00000344683 BATFQ16520 125 aa8.2□□□□□ -1.1
MCPH1-201ENST00000344683 CTC1Q2NKJ3 1217 aa8.2□□□□□ -1.1
MCPH1-201ENST00000344683 UAP1L1Q3KQV9 507 aa8.2□□□□□ -1.1
MCPH1-201ENST00000344683 KANK2Q63ZY3 851 aa8.2□□□□□ -1.1
MCPH1-201ENST00000344683 GTF2H2CQ6P1K8 395 aa8.2□□□□□ -1.1
MCPH1-201ENST00000344683 ZPBP2Q6X784 338 aa8.2□□□□□ -1.1
MCPH1-201ENST00000344683 C17orf64Q86WR6 236 aa8.2□□□□□ -1.1
MCPH1-201ENST00000344683 RASGEF1CQ8N431 466 aa8.2□□□□□ -1.1
MCPH1-201ENST00000344683 TMED9Q9BVK6 235 aa8.2□□□□□ -1.1
MCPH1-201ENST00000344683 TMEM121BQ9BXQ6 578 aaPredicted RBP8.2□□□□□ -1.1
MCPH1-201ENST00000344683 GNG13Q9P2W3 67 aa8.2□□□□□ -1.1
MCPH1-201ENST00000344683 TRAPPC13A5PLN9 417 aa8.2□□□□□ -1.1
MCPH1-201ENST00000344683 NKRFO15226 690 aaKnown RBP eCLIP8.2□□□□□ -1.1
MCPH1-201ENST00000344683 ALDH2P05091 517 aa8.2□□□□□ -1.1
MCPH1-201ENST00000344683 MAGEA11P43364 429 aa8.2□□□□□ -1.1
MCPH1-201ENST00000344683 CREMQ03060 361 aa8.2□□□□□ -1.1
MCPH1-201ENST00000344683 FOXM1Q08050 763 aa8.2□□□□□ -1.1
MCPH1-201ENST00000344683 BNIP3Q12983 259 aa8.2□□□□□ -1.1
MCPH1-201ENST00000344683 DOK6Q6PKX4 331 aa8.2□□□□□ -1.1
MCPH1-201ENST00000344683 ZNF527Q8NB42 609 aa8.2□□□□□ -1.1
MCPH1-201ENST00000344683 RDH12Q96NR8 316 aa8.2□□□□□ -1.1
MCPH1-201ENST00000344683 FERD3LQ96RJ6 166 aa8.2□□□□□ -1.1
MCPH1-201ENST00000344683 PCBD2Q9H0N5 130 aa8.2□□□□□ -1.1
MCPH1-201ENST00000344683 KCTD5Q9NXV2 234 aa8.2□□□□□ -1.1
MCPH1-201ENST00000344683 ZNF226Q9NYT6 803 aa8.2□□□□□ -1.1
MCPH1-201ENST00000344683 TNFRSF10DQ9UBN6 386 aa8.2□□□□□ -1.1
MCPH1-201ENST00000344683 NINQ8N4C6 2090 aa8.2□□□□□ -1.1
MCPH1-201ENST00000344683 CSF1RP07333 972 aa8.2□□□□□ -1.1
MCPH1-201ENST00000344683 CAPN3P20807 821 aa8.2□□□□□ -1.1
MCPH1-201ENST00000344683 CERS1P27544 350 aa8.2□□□□□ -1.1
MCPH1-201ENST00000344683 TRIM23P36406 574 aa8.2□□□□□ -1.1
MCPH1-201ENST00000344683 CAP2P40123 477 aa8.2□□□□□ -1.1
MCPH1-201ENST00000344683 ANTXR2P58335 489 aa8.2□□□□□ -1.1
MCPH1-201ENST00000344683 ZNF674Q2M3X9 581 aa8.2□□□□□ -1.1
MCPH1-201ENST00000344683 PTPN20Q4JDL3 420 aa8.2□□□□□ -1.1
MCPH1-201ENST00000344683 NOL9Q5SY16 702 aaKnown RBP8.2□□□□□ -1.1
MCPH1-201ENST00000344683 HHIPL2Q6UWX4 724 aa8.2□□□□□ -1.1
MCPH1-201ENST00000344683 UBE2R2Q712K3 238 aaPredicted RBP8.2□□□□□ -1.1
MCPH1-201ENST00000344683 FOXRED2Q8IWF2 684 aa8.2□□□□□ -1.1
MCPH1-201ENST00000344683 OSTF1Q92882 214 aa8.2□□□□□ -1.1
MCPH1-201ENST00000344683 TWNKQ96RR1 684 aa8.2□□□□□ -1.1
MCPH1-201ENST00000344683 OR10A4Q9H209 315 aa8.2□□□□□ -1.1
MCPH1-201ENST00000344683 PPA2Q9H2U2 334 aa8.2□□□□□ -1.1
MCPH1-201ENST00000344683 MROH8Q9H579 483 aa8.2□□□□□ -1.1
MCPH1-201ENST00000344683 COLEC10Q9Y6Z7 277 aa8.2□□□□□ -1.1
MCPH1-201ENST00000344683 CHD4Q14839 1912 aa8.2□□□□□ -1.1
MCPH1-201ENST00000344683 hCG_1818297A0A087WSY0 165 aa8.2□□□□□ -1.1
MCPH1-201ENST00000344683 LGR5O75473 907 aa8.2□□□□□ -1.1
MCPH1-201ENST00000344683 LYPLA1O75608 230 aaPredicted RBP8.2□□□□□ -1.1
MCPH1-201ENST00000344683 ERAL1O75616 437 aaKnown RBP8.2□□□□□ -1.1
MCPH1-201ENST00000344683 NPPAP01160 153 aa8.2□□□□□ -1.1
MCPH1-201ENST00000344683 TSPAN8P19075 237 aa8.2□□□□□ -1.1
MCPH1-201ENST00000344683 EDNRAP25101 427 aa8.2□□□□□ -1.1
MCPH1-201ENST00000344683 PCBP1Q15365 356 aaKnown RBP eCLIP8.2□□□□□ -1.1
MCPH1-201ENST00000344683 ZNF410Q86VK4 478 aa8.2□□□□□ -1.1
MCPH1-201ENST00000344683 ESX1Q8N693 406 aa8.2□□□□□ -1.1
MCPH1-201ENST00000344683 CADM1Q9BY67 442 aaKnown RBP8.2□□□□□ -1.1
MCPH1-201ENST00000344683 ZFP57Q9NU63 452 aa8.2□□□□□ -1.1
MCPH1-201ENST00000344683 GSKIPQ9P0R6 139 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms