RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 HSPA14Q0VDF9 509 aa20.93■□□□□ 0.94
CCDC38-201ENST00000344280 USP39Q53GS9 565 aaKnown RBP20.93■□□□□ 0.94
CCDC38-201ENST00000344280 ASTLQ6HA08 431 aaPredicted RBP20.93■□□□□ 0.94
CCDC38-201ENST00000344280 CNKSR3Q6P9H4 555 aa20.93■□□□□ 0.94
CCDC38-201ENST00000344280 SLC39A5Q6ZMH5 540 aa20.93■□□□□ 0.94
CCDC38-201ENST00000344280 USP51Q70EK9 711 aa20.93■□□□□ 0.94
CCDC38-201ENST00000344280 PATL1Q86TB9 770 aaKnown RBP20.93■□□□□ 0.94
CCDC38-201ENST00000344280 TNIP2Q8NFZ5 429 aa20.93■□□□□ 0.94
CCDC38-201ENST00000344280 PYCR2Q96C36 320 aa20.93■□□□□ 0.94
CCDC38-201ENST00000344280 ECHDC3Q96DC8 303 aa20.93■□□□□ 0.94
CCDC38-201ENST00000344280 PHF12Q96QT6 1004 aa20.93■□□□□ 0.94
CCDC38-201ENST00000344280 ZBTB18Q99592 522 aa20.93■□□□□ 0.94
CCDC38-201ENST00000344280 COPS8Q99627 209 aa20.93■□□□□ 0.94
CCDC38-201ENST00000344280 C19orf43Q9BQ61 176 aa20.93■□□□□ 0.94
CCDC38-201ENST00000344280 ZDHHC6Q9H6R6 413 aa20.93■□□□□ 0.94
CCDC38-201ENST00000344280 PAK6Q9NQU5 681 aaPredicted RBP20.93■□□□□ 0.94
CCDC38-201ENST00000344280 LEFTY2O00292 366 aa20.92■□□□□ 0.94
CCDC38-201ENST00000344280 RAP2AP10114 183 aa20.92■□□□□ 0.94
CCDC38-201ENST00000344280 AKT1P31749 480 aa20.92■□□□□ 0.94
CCDC38-201ENST00000344280 SLC7A9P82251 487 aa20.92■□□□□ 0.94
CCDC38-201ENST00000344280 TTLL9Q3SXZ7 439 aa20.92■□□□□ 0.94
CCDC38-201ENST00000344280 MPP7Q5T2T1 576 aa20.92■□□□□ 0.94
CCDC38-201ENST00000344280 DPY19L3Q6ZPD9 716 aa20.92■□□□□ 0.94
CCDC38-201ENST00000344280 AURKBQ96GD4 344 aaPredicted RBP20.92■□□□□ 0.94
CCDC38-201ENST00000344280 SUV39H2Q9H5I1 410 aa20.92■□□□□ 0.94
CCDC38-201ENST00000344280 ACTR8Q9H981 624 aa20.92■□□□□ 0.94
CCDC38-201ENST00000344280 KCTD5Q9NXV2 234 aa20.92■□□□□ 0.94
CCDC38-201ENST00000344280 SLCO3A1Q9UIG8 710 aa20.92■□□□□ 0.94
CCDC38-201ENST00000344280 DENND4CQ5VZ89 1909 aa20.92■□□□□ 0.94
CCDC38-201ENST00000344280 TULP3O75386 442 aa20.92■□□□□ 0.94
CCDC38-201ENST00000344280 MTX2O75431 263 aa20.92■□□□□ 0.94
CCDC38-201ENST00000344280 WDR47O94967 919 aa20.92■□□□□ 0.94
CCDC38-201ENST00000344280 CLDN9O95484 217 aa20.92■□□□□ 0.94
CCDC38-201ENST00000344280 UGT2B4P06133 528 aa20.92■□□□□ 0.94
CCDC38-201ENST00000344280 ANXA5P08758 320 aa20.92■□□□□ 0.94
CCDC38-201ENST00000344280 SNRPD1P62314 119 aaKnown RBP20.92■□□□□ 0.94
CCDC38-201ENST00000344280 CACHD1Q5VU97 1274 aa20.92■□□□□ 0.94
CCDC38-201ENST00000344280 C22orf39Q6P5X5 142 aa20.92■□□□□ 0.94
CCDC38-201ENST00000344280 ABRAXAS1Q6UWZ7 409 aa20.92■□□□□ 0.94
CCDC38-201ENST00000344280 SLC22A15Q8IZD6 547 aa20.92■□□□□ 0.94
CCDC38-201ENST00000344280 CHCHD4Q8N4Q1 142 aa20.92■□□□□ 0.94
CCDC38-201ENST00000344280 SKA2Q8WVK7 121 aaPredicted RBP20.92■□□□□ 0.94
CCDC38-201ENST00000344280 SLC46A2Q9BY10 475 aa20.92■□□□□ 0.94
CCDC38-201ENST00000344280 C8orf4Q9NR00 106 aa20.92■□□□□ 0.94
CCDC38-201ENST00000344280 THEGQ9P2T0 379 aa20.92■□□□□ 0.94
CCDC38-201ENST00000344280 EBF1Q9UH73 591 aa20.92■□□□□ 0.94
CCDC38-201ENST00000344280 PRSS23O95084 383 aa20.91■□□□□ 0.94
CCDC38-201ENST00000344280 C1SP09871 688 aa20.91■□□□□ 0.94
CCDC38-201ENST00000344280 ARSFP54793 590 aa20.91■□□□□ 0.94
CCDC38-201ENST00000344280 MAD2L1Q13257 205 aaPredicted RBP20.91■□□□□ 0.94
CCDC38-201ENST00000344280 LAPTM5Q13571 262 aa20.91■□□□□ 0.94
CCDC38-201ENST00000344280 CHST14Q8NCH0 376 aa20.91■□□□□ 0.94
CCDC38-201ENST00000344280 SLC22A17Q8WUG5 538 aa20.91■□□□□ 0.94
CCDC38-201ENST00000344280 CCDC115Q96NT0 180 aa20.91■□□□□ 0.94
CCDC38-201ENST00000344280 OR52E6Q96RD3 313 aa20.91■□□□□ 0.94
CCDC38-201ENST00000344280 BEGAINQ9BUH8 593 aa20.91■□□□□ 0.94
CCDC38-201ENST00000344280 GPBP1L1Q9HC44 474 aaPredicted RBP20.91■□□□□ 0.94
CCDC38-201ENST00000344280 LTB4R2Q9NPC1 389 aa20.91■□□□□ 0.94
CCDC38-201ENST00000344280 C1orf109Q9NX04 203 aa20.91■□□□□ 0.94
CCDC38-201ENST00000344280 ADGRE2Q9UHX3 823 aa20.91■□□□□ 0.94
CCDC38-201ENST00000344280 B4GAT1O43505 415 aa20.9■□□□□ 0.94
CCDC38-201ENST00000344280 LILRB3O75022 631 aa20.9■□□□□ 0.94
CCDC38-201ENST00000344280 FKTNO75072 461 aa20.9■□□□□ 0.94
CCDC38-201ENST00000344280 TACR1P25103 407 aa20.9■□□□□ 0.94
CCDC38-201ENST00000344280 MTHFRP42898 656 aa20.9■□□□□ 0.94
CCDC38-201ENST00000344280 FAM98BQ52LJ0 330 aaKnown RBP20.9■□□□□ 0.94
CCDC38-201ENST00000344280 SERPINA13PQ6UXR4 307 aa20.9■□□□□ 0.94
CCDC38-201ENST00000344280 FAM43BQ6ZT52 329 aaPredicted RBP20.9■□□□□ 0.94
CCDC38-201ENST00000344280 UBE2R2Q712K3 238 aaPredicted RBP20.9■□□□□ 0.94
CCDC38-201ENST00000344280 REM2Q8IYK8 340 aaPredicted RBP20.9■□□□□ 0.94
CCDC38-201ENST00000344280 HS3ST5Q8IZT8 346 aa20.9■□□□□ 0.94
CCDC38-201ENST00000344280 MUS81Q96NY9 551 aa20.9■□□□□ 0.94
CCDC38-201ENST00000344280 NPLQ9BXD5 320 aaPredicted RBP20.9■□□□□ 0.94
CCDC38-201ENST00000344280 SLC32A1Q9H598 525 aa20.9■□□□□ 0.94
CCDC38-201ENST00000344280 GORASP2Q9H8Y8 452 aa20.9■□□□□ 0.94
CCDC38-201ENST00000344280 TUBA8Q9NY65 449 aaPredicted RBP20.9■□□□□ 0.94
CCDC38-201ENST00000344280 LIMD1Q9UGP4 676 aa20.9■□□□□ 0.94
CCDC38-201ENST00000344280 PCDHB14Q9Y5E9 798 aa20.9■□□□□ 0.94
CCDC38-201ENST00000344280 IL6P05231 212 aa20.9■□□□□ 0.94
CCDC38-201ENST00000344280 CDK4P11802 303 aa20.9■□□□□ 0.94
CCDC38-201ENST00000344280 CHRNB3Q05901 458 aa20.9■□□□□ 0.94
CCDC38-201ENST00000344280 PPP1R8Q12972 351 aaKnown RBP20.9■□□□□ 0.94
CCDC38-201ENST00000344280 TMEM259Q4ZIN3 620 aa20.9■□□□□ 0.94
CCDC38-201ENST00000344280 ANKRD34AQ69YU3 496 aa20.9■□□□□ 0.94
CCDC38-201ENST00000344280 GCNT7Q6ZNI0 430 aa20.9■□□□□ 0.94
CCDC38-201ENST00000344280 RNF165Q6ZSG1 346 aa20.9■□□□□ 0.94
CCDC38-201ENST00000344280 USP45Q70EL2 814 aa20.9■□□□□ 0.94
CCDC38-201ENST00000344280 GPR141Q7Z602 305 aa20.9■□□□□ 0.94
CCDC38-201ENST00000344280 ANKRD46Q86W74 232 aa20.9■□□□□ 0.94
CCDC38-201ENST00000344280 CLVS1Q8IUQ0 354 aaPredicted RBP20.9■□□□□ 0.94
CCDC38-201ENST00000344280 ALDH16A1Q8IZ83 802 aa20.9■□□□□ 0.94
CCDC38-201ENST00000344280 ADAMTS16Q8TE57 1224 aa20.9■□□□□ 0.94
CCDC38-201ENST00000344280 MCCC1Q96RQ3 725 aaPredicted RBP20.9■□□□□ 0.94
CCDC38-201ENST00000344280 HPS4Q9NQG7 708 aa20.9■□□□□ 0.94
CCDC38-201ENST00000344280 CDC14AQ9UNH5 594 aa20.9■□□□□ 0.94
CCDC38-201ENST00000344280 HS3ST2Q9Y278 367 aa20.9■□□□□ 0.94
CCDC38-201ENST00000344280 GSTA4O15217 222 aa20.89■□□□□ 0.94
CCDC38-201ENST00000344280 PRAMEF4O60810 478 aa20.89■□□□□ 0.94
CCDC38-201ENST00000344280 DEAF1O75398 565 aaPredicted RBP20.89■□□□□ 0.94
CCDC38-201ENST00000344280 PARNO95453 639 aaKnown RBP20.89■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms