RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 RNF220Q5VTB9 566 aa18.18■□□□□ 0.5
HOXA9-201ENST00000343483 IL23RQ5VWK5 629 aa18.18■□□□□ 0.5
HOXA9-201ENST00000343483 BLOC1S3Q6QNY0 202 aa18.18■□□□□ 0.5
HOXA9-201ENST00000343483 MRPL38Q96DV4 380 aaKnown RBP18.18■□□□□ 0.5
HOXA9-201ENST00000343483 P2RY13Q9BPV8 354 aa18.18■□□□□ 0.5
HOXA9-201ENST00000343483 PLXNA2O75051 1894 aa18.17■□□□□ 0.5
HOXA9-201ENST00000343483 TMEM265A0A087WTH1 108 aa18.17■□□□□ 0.5
HOXA9-201ENST00000343483 LOC730098B7Z3J9 87 aa18.17■□□□□ 0.5
HOXA9-201ENST00000343483 QSOX1O00391 747 aa18.17■□□□□ 0.5
HOXA9-201ENST00000343483 ATG13O75143 517 aa18.17■□□□□ 0.5
HOXA9-201ENST00000343483 SLC22A3O75751 556 aa18.17■□□□□ 0.5
HOXA9-201ENST00000343483 RNASEH2AO75792 299 aaKnown RBP18.17■□□□□ 0.5
HOXA9-201ENST00000343483 RECQL5O94762 991 aaPredicted RBP18.17■□□□□ 0.5
HOXA9-201ENST00000343483 EPHX1P07099 455 aa18.17■□□□□ 0.5
HOXA9-201ENST00000343483 CYP2A7P20853 494 aa18.17■□□□□ 0.5
HOXA9-201ENST00000343483 IL12RB1P42701 662 aa18.17■□□□□ 0.5
HOXA9-201ENST00000343483 KCNK10P57789 538 aa18.17■□□□□ 0.5
HOXA9-201ENST00000343483 UFM1P61960 85 aa18.17■□□□□ 0.5
HOXA9-201ENST00000343483 IRX1P78414 480 aaPredicted RBP18.17■□□□□ 0.5
HOXA9-201ENST00000343483 CDKL1Q00532 357 aa18.17■□□□□ 0.5
HOXA9-201ENST00000343483 TMEM115Q12893 351 aaPredicted RBP18.17■□□□□ 0.5
HOXA9-201ENST00000343483 SP140Q13342 867 aa18.17■□□□□ 0.5
HOXA9-201ENST00000343483 PDK3Q15120 406 aa18.17■□□□□ 0.5
HOXA9-201ENST00000343483 SGO1Q5FBB7 561 aa18.17■□□□□ 0.5
HOXA9-201ENST00000343483 PHC3Q8NDX5 983 aa18.17■□□□□ 0.5
HOXA9-201ENST00000343483 BRINP2Q9C0B6 783 aa18.17■□□□□ 0.5
HOXA9-201ENST00000343483 SLC32A1Q9H598 525 aa18.17■□□□□ 0.5
HOXA9-201ENST00000343483 GFYI3L273 518 aa18.16■□□□□ 0.5
HOXA9-201ENST00000343483 LSM1O15116 133 aaKnown RBP18.16■□□□□ 0.5
HOXA9-201ENST00000343483 MMP20O60882 483 aa18.16■□□□□ 0.5
HOXA9-201ENST00000343483 DNAJA2O60884 412 aa18.16■□□□□ 0.5
HOXA9-201ENST00000343483 EBLN1P0CF75 366 aa18.16■□□□□ 0.5
HOXA9-201ENST00000343483 PBLDP30039 288 aaPredicted RBP18.16■□□□□ 0.5
HOXA9-201ENST00000343483 HYAL1Q12794 435 aa18.16■□□□□ 0.5
HOXA9-201ENST00000343483 ANKRD54Q6NXT1 300 aa18.16■□□□□ 0.5
HOXA9-201ENST00000343483 TRIM74Q86UV6 250 aa18.16■□□□□ 0.5
HOXA9-201ENST00000343483 TCAIMQ8N3R3 496 aa18.16■□□□□ 0.5
HOXA9-201ENST00000343483 MCOLN3Q8TDD5 553 aa18.16■□□□□ 0.5
HOXA9-201ENST00000343483 VPS33AQ96AX1 596 aa18.16■□□□□ 0.5
HOXA9-201ENST00000343483 PYCR2Q96C36 320 aa18.16■□□□□ 0.5
HOXA9-201ENST00000343483 NUS1Q96E22 293 aa18.16■□□□□ 0.5
HOXA9-201ENST00000343483 NTMT1Q9BV86 223 aa18.16■□□□□ 0.5
HOXA9-201ENST00000343483 ACTR8Q9H981 624 aa18.16■□□□□ 0.5
HOXA9-201ENST00000343483 FARSBQ9NSD9 589 aaKnown RBP18.16■□□□□ 0.5
HOXA9-201ENST00000343483 MAP10Q9P2G4 905 aa18.16■□□□□ 0.5
HOXA9-201ENST00000343483 AP4S1Q9Y587 144 aa18.16■□□□□ 0.5
HOXA9-201ENST00000343483 K7ESM1 405 aa18.16■□□□□ 0.5
HOXA9-201ENST00000343483 AREL1O15033 823 aa18.16■□□□□ 0.5
HOXA9-201ENST00000343483 SLC16A5O15375 505 aa18.16■□□□□ 0.5
HOXA9-201ENST00000343483 LZTS3O60299 673 aaPredicted RBP18.16■□□□□ 0.5
HOXA9-201ENST00000343483 ULK1O75385 1050 aa18.16■□□□□ 0.5
HOXA9-201ENST00000343483 SLCO2B1O94956 709 aa18.16■□□□□ 0.5
HOXA9-201ENST00000343483 WDR47O94967 919 aa18.16■□□□□ 0.5
HOXA9-201ENST00000343483 KAT7O95251 611 aa18.16■□□□□ 0.5
HOXA9-201ENST00000343483 C6P13671 934 aa18.16■□□□□ 0.5
HOXA9-201ENST00000343483 GGT5P36269 586 aa18.16■□□□□ 0.5
HOXA9-201ENST00000343483 PREPP48147 710 aa18.16■□□□□ 0.5
HOXA9-201ENST00000343483 HNMTP50135 292 aa18.16■□□□□ 0.5
HOXA9-201ENST00000343483 RHDQ02161 417 aa18.16■□□□□ 0.5
HOXA9-201ENST00000343483 ABRQ12979 859 aa18.16■□□□□ 0.5
HOXA9-201ENST00000343483 GRIK2Q13002 908 aa18.16■□□□□ 0.5
HOXA9-201ENST00000343483 ZXDCQ2QGD7 858 aaPredicted RBP18.16■□□□□ 0.5
HOXA9-201ENST00000343483 AP5B1Q2VPB7 878 aa18.16■□□□□ 0.5
HOXA9-201ENST00000343483 PDCD4Q53EL6 469 aaKnown RBP18.16■□□□□ 0.5
HOXA9-201ENST00000343483 C6orf10Q5SRN2 563 aa18.16■□□□□ 0.5
HOXA9-201ENST00000343483 CYP2R1Q6VVX0 501 aa18.16■□□□□ 0.5
HOXA9-201ENST00000343483 TICAM1Q8IUC6 712 aa18.16■□□□□ 0.5
HOXA9-201ENST00000343483 CHCHD4Q8N4Q1 142 aa18.16■□□□□ 0.5
HOXA9-201ENST00000343483 TMEM102Q8N9M5 508 aaPredicted RBP18.16■□□□□ 0.5
HOXA9-201ENST00000343483 TMEM159Q96B96 161 aa18.16■□□□□ 0.5
HOXA9-201ENST00000343483 MYADMQ96S97 322 aa18.16■□□□□ 0.5
HOXA9-201ENST00000343483 HOPXQ9BPY8 73 aaPredicted RBP18.16■□□□□ 0.5
HOXA9-201ENST00000343483 Q9H521 79 aa18.16■□□□□ 0.5
HOXA9-201ENST00000343483 TRPS1Q9UHF7 1281 aa18.16■□□□□ 0.5
HOXA9-201ENST00000343483 CLDN9O95484 217 aa18.15■□□□□ 0.5
HOXA9-201ENST00000343483 STAMBPO95630 424 aa18.15■□□□□ 0.5
HOXA9-201ENST00000343483 PRLHRP49683 370 aa18.15■□□□□ 0.5
HOXA9-201ENST00000343483 RCAN2Q14206 197 aa18.15■□□□□ 0.5
HOXA9-201ENST00000343483 CCDC85BQ15834 202 aaPredicted RBP18.15■□□□□ 0.5
HOXA9-201ENST00000343483 PTCHD3Q3KNS1 767 aa18.15■□□□□ 0.5
HOXA9-201ENST00000343483 RAET1GQ6H3X3 334 aa18.15■□□□□ 0.5
HOXA9-201ENST00000343483 PRMT9Q6P2P2 845 aa18.15■□□□□ 0.5
HOXA9-201ENST00000343483 TMEM220Q6QAJ8 160 aa18.15■□□□□ 0.5
HOXA9-201ENST00000343483 NEK10Q6ZWH5 1172 aa18.15■□□□□ 0.5
HOXA9-201ENST00000343483 LRRC70Q7Z2Q7 622 aa18.15■□□□□ 0.5
HOXA9-201ENST00000343483 CYP2U1Q7Z449 544 aa18.15■□□□□ 0.5
HOXA9-201ENST00000343483 DSG4Q86SJ6 1040 aa18.15■□□□□ 0.5
HOXA9-201ENST00000343483 LILRA3Q8N6C8 439 aaPredicted RBP18.15■□□□□ 0.5
HOXA9-201ENST00000343483 GBP5Q96PP8 586 aa18.15■□□□□ 0.5
HOXA9-201ENST00000343483 GPATCH1Q9BRR8 931 aaKnown RBP18.15■□□□□ 0.5
HOXA9-201ENST00000343483 CCM2Q9BSQ5 444 aa18.15■□□□□ 0.5
HOXA9-201ENST00000343483 ZNHIT2Q9UHR6 403 aa18.15■□□□□ 0.5
HOXA9-201ENST00000343483 ZNF490Q9ULM2 529 aaPredicted RBP18.15■□□□□ 0.5
HOXA9-201ENST00000343483 MAP3K13O43283 966 aa18.14■□□□□ 0.5
HOXA9-201ENST00000343483 RGS14O43566 566 aa18.14■□□□□ 0.5
HOXA9-201ENST00000343483 SOD1P00441 154 aa18.14■□□□□ 0.5
HOXA9-201ENST00000343483 PSMC3P17980 439 aa18.14■□□□□ 0.5
HOXA9-201ENST00000343483 EPORP19235 508 aa18.14■□□□□ 0.5
HOXA9-201ENST00000343483 MRPL19P49406 292 aaKnown RBP18.14■□□□□ 0.5
HOXA9-201ENST00000343483 AP1S2P56377 157 aa18.14■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms