RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 IL12AP29459 219 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 PRR23BQ6ZRT6 265 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 UTS2BQ765I0 119 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 CHST15Q7LFX5 561 aaPredicted RBP7.05□□□□□ -1.28
VCAN-202ENST00000342785 C16orf62Q7Z3J2 963 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 CMTM8Q8IZV2 173 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 ST13P5Q8NFI4 369 aaPredicted RBP7.05□□□□□ -1.28
VCAN-202ENST00000342785 PIH1D2Q8WWB5 315 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 KHSRPQ92945 711 aaKnown RBP eCLIP7.05□□□□□ -1.28
VCAN-202ENST00000342785 COX4I2Q96KJ9 171 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 AIF1LQ9BQI0 150 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 HDHD2Q9H0R4 259 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 KLHL1Q9NR64 748 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 ZNF232Q9UNY5 417 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 AIREO43918 545 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 GJB5O95377 273 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 GJA1P17302 382 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 GPAT3Q53EU6 434 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 RNF19BQ6ZMZ0 732 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 VN1R5Q7Z5H4 357 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 SCD5Q86SK9 330 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 GATAD2AQ86YP4 633 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 WRAP53Q9BUR4 548 aaKnown RBP7.05□□□□□ -1.28
VCAN-202ENST00000342785 VPS29Q9UBQ0 182 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 PCDHGB3Q9Y5G1 929 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 MYH7BA7E2Y1 1941 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 A0A1W2PRU2 124 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 RBM47A0AV96 593 aaKnown RBP7.05□□□□□ -1.28
VCAN-202ENST00000342785 MANBAO00462 879 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 FEN1P39748 380 aaKnown RBP7.05□□□□□ -1.28
VCAN-202ENST00000342785 ARSFP54793 590 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 SH3BP2P78314 561 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 ABHD18Q0P651 414 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 SYT16Q17RD7 645 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 PIGGQ5H8A4 983 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 PPP4R4Q6NUP7 873 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 OTOP2Q7RTS6 562 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 PHYKPLQ8IUZ5 450 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 TMEM199Q8N511 208 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 DCAF4L2Q8NA75 395 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 KREMEN2Q8NCW0 462 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 C3orf58Q8NDZ4 430 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 RAD51AP1Q96B01 352 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 C12orf43Q96C57 262 aaKnown RBP7.05□□□□□ -1.28
VCAN-202ENST00000342785 ZNF382Q96SR6 550 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 COPS4Q9BT78 406 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 SERHL2Q9H4I8 314 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 SOX17Q9H6I2 414 aaPredicted RBP7.05□□□□□ -1.28
VCAN-202ENST00000342785 MEAF6Q9HAF1 191 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 SERHLQ9NQF3 203 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 TRNAU1APQ9NX07 287 aaKnown RBP7.05□□□□□ -1.28
VCAN-202ENST00000342785 CCL16O15467 120 aa7.04□□□□□ -1.28
VCAN-202ENST00000342785 BMP10O95393 424 aa7.04□□□□□ -1.28
VCAN-202ENST00000342785 CENPAP49450 140 aa7.04□□□□□ -1.28
VCAN-202ENST00000342785 TEAD4Q15561 434 aa7.04□□□□□ -1.28
VCAN-202ENST00000342785 RFTN2Q52LD8 501 aaPredicted RBP7.04□□□□□ -1.28
VCAN-202ENST00000342785 FAM46CQ5VWP2 391 aa7.04□□□□□ -1.28
VCAN-202ENST00000342785 PLPP4Q5VZY2 271 aa7.04□□□□□ -1.28
VCAN-202ENST00000342785 BEND5Q7L4P6 421 aa7.04□□□□□ -1.28
VCAN-202ENST00000342785 GPR65Q8IYL9 337 aa7.04□□□□□ -1.28
VCAN-202ENST00000342785 GATA6Q92908 595 aa7.04□□□□□ -1.28
VCAN-202ENST00000342785 HTATIP2Q9BUP3 242 aa7.04□□□□□ -1.28
VCAN-202ENST00000342785 SLC29A3Q9BZD2 475 aa7.04□□□□□ -1.28
VCAN-202ENST00000342785 CCDC177Q9NQR7 707 aaPredicted RBP7.04□□□□□ -1.28
VCAN-202ENST00000342785 EXD2Q9NVH0 621 aa7.04□□□□□ -1.28
VCAN-202ENST00000342785 DHRS7Q9Y394 339 aa7.04□□□□□ -1.28
VCAN-202ENST00000342785 C4AP0C0L4 1744 aa7.04□□□□□ -1.28
VCAN-202ENST00000342785 C4BP0C0L5 1744 aa7.04□□□□□ -1.28
VCAN-202ENST00000342785 LRP5O75197 1615 aa7.04□□□□□ -1.28
VCAN-202ENST00000342785 FGBP02675 491 aa7.04□□□□□ -1.28
VCAN-202ENST00000342785 PRNPP04156 253 aa7.04□□□□□ -1.28
VCAN-202ENST00000342785 ITGB1P05556 798 aa7.04□□□□□ -1.28
VCAN-202ENST00000342785 TLX1P31314 330 aaPredicted RBP7.04□□□□□ -1.28
VCAN-202ENST00000342785 PTSQ03393 145 aa7.04□□□□□ -1.28
VCAN-202ENST00000342785 TRIM32Q13049 653 aa7.04□□□□□ -1.28
VCAN-202ENST00000342785 LAPTM5Q13571 262 aa7.04□□□□□ -1.28
VCAN-202ENST00000342785 IFI44LQ53G44 452 aa7.04□□□□□ -1.28
VCAN-202ENST00000342785 C9orf64Q5T6V5 341 aa7.04□□□□□ -1.28
VCAN-202ENST00000342785 PSAPL1Q6NUJ1 521 aa7.04□□□□□ -1.28
VCAN-202ENST00000342785 TPRG1Q6ZUI0 275 aa7.04□□□□□ -1.28
VCAN-202ENST00000342785 SYVN1Q86TM6 617 aa7.04□□□□□ -1.28
VCAN-202ENST00000342785 SH3RF2Q8TEC5 729 aa7.04□□□□□ -1.28
VCAN-202ENST00000342785 MZB1Q8WU39 189 aa7.04□□□□□ -1.28
VCAN-202ENST00000342785 HTRA1Q92743 480 aa7.04□□□□□ -1.28
VCAN-202ENST00000342785 EXOSC8Q96B26 276 aaKnown RBP7.04□□□□□ -1.28
VCAN-202ENST00000342785 AURKBQ96GD4 344 aaPredicted RBP7.04□□□□□ -1.28
VCAN-202ENST00000342785 SLC38A2Q96QD8 506 aa7.04□□□□□ -1.28
VCAN-202ENST00000342785 CXCL16Q9H2A7 254 aa7.04□□□□□ -1.28
VCAN-202ENST00000342785 SRRDQ9UH36 339 aa7.04□□□□□ -1.28
VCAN-202ENST00000342785 RNF11Q9Y3C5 154 aa7.04□□□□□ -1.28
VCAN-202ENST00000342785 FADS2P1A8MWK0 482 aa7.04□□□□□ -1.28
VCAN-202ENST00000342785 ARVCFO00192 962 aa7.04□□□□□ -1.28
VCAN-202ENST00000342785 CASP9P55211 416 aa7.04□□□□□ -1.28
VCAN-202ENST00000342785 TLE2Q04725 743 aa7.04□□□□□ -1.28
VCAN-202ENST00000342785 OR2T5Q6IEZ7 315 aa7.04□□□□□ -1.28
VCAN-202ENST00000342785 PAQR9Q6ZVX9 377 aa7.04□□□□□ -1.28
VCAN-202ENST00000342785 OR2T29Q8NH02 315 aa7.04□□□□□ -1.28
VCAN-202ENST00000342785 WDR83Q9BRX9 315 aaKnown RBP7.04□□□□□ -1.28
VCAN-202ENST00000342785 C1QTNF7Q9BXJ2 289 aa7.04□□□□□ -1.28
VCAN-202ENST00000342785 GULP1Q9UBP9 304 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms