RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 C1orf74Q96LT6 269 aa18.16■□□□□ 0.5
SMPD1-201ENST00000342245 SMURF1Q9HCE7 757 aa18.16■□□□□ 0.5
SMPD1-201ENST00000342245 NDFIP2Q9NV92 336 aa18.16■□□□□ 0.5
SMPD1-201ENST00000342245 MRPL39Q9NYK5 338 aaKnown RBP18.16■□□□□ 0.5
SMPD1-201ENST00000342245 A0A0U1RQS6 177 aa18.16■□□□□ 0.5
SMPD1-201ENST00000342245 B4DXG7 233 aa18.16■□□□□ 0.5
SMPD1-201ENST00000342245 TOR1AO14656 332 aa18.16■□□□□ 0.5
SMPD1-201ENST00000342245 CCNYL3P0C7X3 344 aa18.16■□□□□ 0.5
SMPD1-201ENST00000342245 KYAT1Q16773 422 aa18.16■□□□□ 0.5
SMPD1-201ENST00000342245 PPP1R26Q5T8A7 1209 aaPredicted RBP18.16■□□□□ 0.5
SMPD1-201ENST00000342245 ESRP1Q6NXG1 681 aaKnown RBP18.16■□□□□ 0.5
SMPD1-201ENST00000342245 TMEM65Q6PI78 240 aa18.16■□□□□ 0.5
SMPD1-201ENST00000342245 PLEKHM3Q6ZWE6 761 aa18.16■□□□□ 0.5
SMPD1-201ENST00000342245 FAM131BQ86XD5 332 aa18.16■□□□□ 0.5
SMPD1-201ENST00000342245 FNDC5Q8NAU1 212 aa18.16■□□□□ 0.5
SMPD1-201ENST00000342245 ZNF548Q8NEK5 533 aaPredicted RBP18.16■□□□□ 0.5
SMPD1-201ENST00000342245 UBASH3BQ8TF42 649 aa18.16■□□□□ 0.5
SMPD1-201ENST00000342245 CDCA5Q96FF9 252 aa18.16■□□□□ 0.5
SMPD1-201ENST00000342245 HYLS1Q96M11 299 aa18.16■□□□□ 0.5
SMPD1-201ENST00000342245 Q96MT0 163 aa18.16■□□□□ 0.5
SMPD1-201ENST00000342245 RAD9AQ99638 391 aa18.16■□□□□ 0.5
SMPD1-201ENST00000342245 PITX2Q99697 317 aa18.16■□□□□ 0.5
SMPD1-201ENST00000342245 TBL1YQ9BQ87 522 aa18.16■□□□□ 0.5
SMPD1-201ENST00000342245 PPA2Q9H2U2 334 aa18.16■□□□□ 0.5
SMPD1-201ENST00000342245 ERVMER34-1Q9H9K5 563 aa18.16■□□□□ 0.5
SMPD1-201ENST00000342245 DCAF13Q9NV06 445 aaKnown RBP18.16■□□□□ 0.5
SMPD1-201ENST00000342245 SEC14L5O43304 696 aa18.15■□□□□ 0.5
SMPD1-201ENST00000342245 SLC22A5O76082 557 aa18.15■□□□□ 0.5
SMPD1-201ENST00000342245 DNTTP04053 509 aa18.15■□□□□ 0.5
SMPD1-201ENST00000342245 MATKP42679 507 aa18.15■□□□□ 0.5
SMPD1-201ENST00000342245 MTPNP58546 118 aa18.15■□□□□ 0.5
SMPD1-201ENST00000342245 LCP2Q13094 533 aa18.15■□□□□ 0.5
SMPD1-201ENST00000342245 GARNL3Q5VVW2 1013 aa18.15■□□□□ 0.5
SMPD1-201ENST00000342245 TMPRSS11AQ6ZMR5 421 aa18.15■□□□□ 0.5
SMPD1-201ENST00000342245 P3H2Q8IVL5 708 aa18.15■□□□□ 0.5
SMPD1-201ENST00000342245 LINC00469Q8N7U9 141 aa18.15■□□□□ 0.5
SMPD1-201ENST00000342245 PTGR2Q8N8N7 351 aaPredicted RBP18.15■□□□□ 0.5
SMPD1-201ENST00000342245 C2orf69Q8N8R5 385 aa18.15■□□□□ 0.5
SMPD1-201ENST00000342245 ZNF675Q8TD23 568 aa18.15■□□□□ 0.5
SMPD1-201ENST00000342245 C12orf42Q96LP6 360 aa18.15■□□□□ 0.5
SMPD1-201ENST00000342245 PPM1MQ96MI6 270 aa18.15■□□□□ 0.5
SMPD1-201ENST00000342245 MMP28Q9H239 520 aa18.15■□□□□ 0.5
SMPD1-201ENST00000342245 INVSQ9Y283 1065 aa18.15■□□□□ 0.5
SMPD1-201ENST00000342245 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.15■□□□□ 0.5
SMPD1-201ENST00000342245 ELOVL7A1L3X0 281 aa18.15■□□□□ 0.5
SMPD1-201ENST00000342245 H3BUI4 141 aa18.15■□□□□ 0.5
SMPD1-201ENST00000342245 CXCR6O00574 342 aa18.15■□□□□ 0.5
SMPD1-201ENST00000342245 MITFO75030 526 aaPredicted RBP18.15■□□□□ 0.5
SMPD1-201ENST00000342245 VPS26AO75436 327 aa18.15■□□□□ 0.5
SMPD1-201ENST00000342245 AIF1P55008 147 aa18.15■□□□□ 0.5
SMPD1-201ENST00000342245 FOXA1P55317 472 aa18.15■□□□□ 0.5
SMPD1-201ENST00000342245 DALRD3Q5D0E6 543 aaKnown RBP18.15■□□□□ 0.5
SMPD1-201ENST00000342245 HECTD2Q5U5R9 776 aa18.15■□□□□ 0.5
SMPD1-201ENST00000342245 CPZQ66K79 652 aa18.15■□□□□ 0.5
SMPD1-201ENST00000342245 GALNT5Q7Z7M9 940 aa18.15■□□□□ 0.5
SMPD1-201ENST00000342245 CYP4Z1Q86W10 505 aa18.15■□□□□ 0.5
SMPD1-201ENST00000342245 TTLQ8NG68 377 aa18.15■□□□□ 0.5
SMPD1-201ENST00000342245 GIMAP5Q96F15 307 aa18.15■□□□□ 0.5
SMPD1-201ENST00000342245 B3GNT5Q9BYG0 378 aa18.15■□□□□ 0.5
SMPD1-201ENST00000342245 SCPEP1Q9HB40 452 aa18.15■□□□□ 0.5
SMPD1-201ENST00000342245 AGO1Q9UL18 857 aaKnown RBP18.15■□□□□ 0.5
SMPD1-201ENST00000342245 I3L521 148 aa18.14■□□□□ 0.5
SMPD1-201ENST00000342245 CACNG3O60359 315 aa18.14■□□□□ 0.5
SMPD1-201ENST00000342245 ERN1O75460 977 aaKnown RBP18.14■□□□□ 0.5
SMPD1-201ENST00000342245 WISP3O95389 354 aaPredicted RBP18.14■□□□□ 0.5
SMPD1-201ENST00000342245 CHMP24386 653 aa18.14■□□□□ 0.5
SMPD1-201ENST00000342245 RGS6P49758 472 aa18.14■□□□□ 0.5
SMPD1-201ENST00000342245 SULT1E1P49888 294 aa18.14■□□□□ 0.5
SMPD1-201ENST00000342245 GALEQ14376 348 aa18.14■□□□□ 0.5
SMPD1-201ENST00000342245 SMN1Q16637 294 aaKnown RBP18.14■□□□□ 0.5
SMPD1-201ENST00000342245 XKR7Q5GH72 579 aa18.14■□□□□ 0.5
SMPD1-201ENST00000342245 PRSS36Q5K4E3 855 aa18.14■□□□□ 0.5
SMPD1-201ENST00000342245 SLC35F1Q5T1Q4 408 aa18.14■□□□□ 0.5
SMPD1-201ENST00000342245 GPR149Q86SP6 731 aa18.14■□□□□ 0.5
SMPD1-201ENST00000342245 NETO2Q8NC67 525 aa18.14■□□□□ 0.5
SMPD1-201ENST00000342245 NPLOC4Q8TAT6 608 aa18.14■□□□□ 0.5
SMPD1-201ENST00000342245 REPS1Q96D71 796 aa18.14■□□□□ 0.5
SMPD1-201ENST00000342245 SPATA9Q9BWV2 254 aa18.14■□□□□ 0.5
SMPD1-201ENST00000342245 TREX1Q9NSU2 369 aa18.14■□□□□ 0.5
SMPD1-201ENST00000342245 PGAP2Q9UHJ9 254 aa18.14■□□□□ 0.5
SMPD1-201ENST00000342245 PSORS1C1Q9UIG5 152 aa18.14■□□□□ 0.5
SMPD1-201ENST00000342245 HSPB11Q9Y547 144 aa18.14■□□□□ 0.5
SMPD1-201ENST00000342245 CSNK1G3Q9Y6M4 447 aa18.14■□□□□ 0.5
SMPD1-201ENST00000342245 TRIP11Q15643 1979 aa18.14■□□□□ 0.49
SMPD1-201ENST00000342245 EFCAB10A6NFE3 127 aa18.14■□□□□ 0.49
SMPD1-201ENST00000342245 ANXA9O76027 345 aa18.14■□□□□ 0.49
SMPD1-201ENST00000342245 CDK1P06493 297 aa18.14■□□□□ 0.49
SMPD1-201ENST00000342245 TNNI3P19429 210 aa18.14■□□□□ 0.49
SMPD1-201ENST00000342245 RHAGQ02094 409 aa18.14■□□□□ 0.49
SMPD1-201ENST00000342245 RIN1Q13671 783 aa18.14■□□□□ 0.49
SMPD1-201ENST00000342245 SOWAHAQ2M3V2 549 aa18.14■□□□□ 0.49
SMPD1-201ENST00000342245 SETMARQ53H47 684 aaPredicted RBP18.14■□□□□ 0.49
SMPD1-201ENST00000342245 CLVS2Q5SYC1 327 aa18.14■□□□□ 0.49
SMPD1-201ENST00000342245 C12orf29Q8N999 325 aa18.14■□□□□ 0.49
SMPD1-201ENST00000342245 COL21A1Q96P44 957 aa18.14■□□□□ 0.49
SMPD1-201ENST00000342245 RHNO1Q9BSD3 238 aa18.14■□□□□ 0.49
SMPD1-201ENST00000342245 SRRQ9GZT4 340 aa18.14■□□□□ 0.49
SMPD1-201ENST00000342245 OR51E2Q9H255 320 aa18.14■□□□□ 0.49
SMPD1-201ENST00000342245 PTPRHQ9HD43 1115 aa18.14■□□□□ 0.49
SMPD1-201ENST00000342245 NRBP2Q9NSY0 501 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms