RNA–Protein interactions for RNA: ENST00000340840.6

TRERF1-201, Transcript of transcriptional regulating factor 1, humanhuman

TSL 5 BASIC

Gene TRERF1, Length 4,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-201ENST00000340840 IPCEF1Q8WWN9 437 aaPredicted RBP9.25□□□□□ -0.93
TRERF1-201ENST00000340840 PYURFQ96I23 114 aa9.25□□□□□ -0.93
TRERF1-201ENST00000340840 CIPCQ9C0C6 399 aa9.25□□□□□ -0.93
TRERF1-201ENST00000340840 GORASP2Q9H8Y8 452 aa9.25□□□□□ -0.93
TRERF1-201ENST00000340840 IKZF3Q9UKT9 509 aa9.25□□□□□ -0.93
TRERF1-201ENST00000340840 EFCAB9A8MZ26 197 aa9.25□□□□□ -0.93
TRERF1-201ENST00000340840 PER2O15055 1255 aa9.25□□□□□ -0.93
TRERF1-201ENST00000340840 BNIP3LO60238 219 aa9.25□□□□□ -0.93
TRERF1-201ENST00000340840 IRF1P10914 325 aa9.25□□□□□ -0.93
TRERF1-201ENST00000340840 IGFBP6P24592 240 aaPredicted RBP9.25□□□□□ -0.93
TRERF1-201ENST00000340840 IL12AP29459 219 aa9.25□□□□□ -0.93
TRERF1-201ENST00000340840 DCTP40126 519 aa9.25□□□□□ -0.93
TRERF1-201ENST00000340840 RXRGP48443 463 aa9.25□□□□□ -0.93
TRERF1-201ENST00000340840 CCL23P55773 120 aa9.25□□□□□ -0.93
TRERF1-201ENST00000340840 DNASE1L3Q13609 305 aa9.25□□□□□ -0.93
TRERF1-201ENST00000340840 SPCS2Q15005 226 aa9.25□□□□□ -0.93
TRERF1-201ENST00000340840 NDUFA5Q16718 116 aa9.25□□□□□ -0.93
TRERF1-201ENST00000340840 ATG9BQ674R7 924 aa9.25□□□□□ -0.93
TRERF1-201ENST00000340840 OR2T5Q6IEZ7 315 aa9.25□□□□□ -0.93
TRERF1-201ENST00000340840 ERICH5Q6P6B1 374 aa9.25□□□□□ -0.93
TRERF1-201ENST00000340840 ARMC8Q8IUR7 673 aa9.25□□□□□ -0.93
TRERF1-201ENST00000340840 OR2T29Q8NH02 315 aa9.25□□□□□ -0.93
TRERF1-201ENST00000340840 SPPL2AQ8TCT8 520 aa9.25□□□□□ -0.93
TRERF1-201ENST00000340840 FCGR1BQ92637 280 aa9.25□□□□□ -0.93
TRERF1-201ENST00000340840 C8orf48Q96LL4 319 aa9.25□□□□□ -0.93
TRERF1-201ENST00000340840 ANKHQ9HCJ1 492 aa9.25□□□□□ -0.93
TRERF1-201ENST00000340840 DNMT3LQ9UJW3 386 aa9.25□□□□□ -0.93
TRERF1-201ENST00000340840 DLGAP1O14490 977 aa9.24□□□□□ -0.93
TRERF1-201ENST00000340840 AIREO43918 545 aa9.24□□□□□ -0.93
TRERF1-201ENST00000340840 STK16O75716 305 aa9.24□□□□□ -0.93
TRERF1-201ENST00000340840 FABP3P05413 133 aa9.24□□□□□ -0.93
TRERF1-201ENST00000340840 HSMCR30P0CW71 290 aa9.24□□□□□ -0.93
TRERF1-201ENST00000340840 PRPS2P11908 318 aa9.24□□□□□ -0.93
TRERF1-201ENST00000340840 PCSK2P16519 638 aa9.24□□□□□ -0.93
TRERF1-201ENST00000340840 KIR3DL1P43629 444 aa9.24□□□□□ -0.93
TRERF1-201ENST00000340840 VBP1P61758 197 aa9.24□□□□□ -0.93
TRERF1-201ENST00000340840 RUNX1T1Q06455 604 aa9.24□□□□□ -0.93
TRERF1-201ENST00000340840 ABHD18Q0P651 414 aa9.24□□□□□ -0.93
TRERF1-201ENST00000340840 ELP6Q0PNE2 266 aa9.24□□□□□ -0.93
TRERF1-201ENST00000340840 FOXD4Q12950 439 aaPredicted RBP9.24□□□□□ -0.93
TRERF1-201ENST00000340840 DDX39BQ13838 428 aaKnown RBP9.24□□□□□ -0.93
TRERF1-201ENST00000340840 SEMA3AQ14563 771 aa9.24□□□□□ -0.93
TRERF1-201ENST00000340840 TIMM50Q3ZCQ8 353 aa9.24□□□□□ -0.93
TRERF1-201ENST00000340840 LETMD1Q6P1Q0 360 aa9.24□□□□□ -0.93
TRERF1-201ENST00000340840 TMEM53Q6P2H8 277 aa9.24□□□□□ -0.93
TRERF1-201ENST00000340840 SLC22A16Q86VW1 577 aa9.24□□□□□ -0.93
TRERF1-201ENST00000340840 SYT12Q8IV01 421 aa9.24□□□□□ -0.93
TRERF1-201ENST00000340840 TAGAPQ8N103 731 aa9.24□□□□□ -0.93
TRERF1-201ENST00000340840 TEX26Q8N6G2 289 aa9.24□□□□□ -0.93
TRERF1-201ENST00000340840 CNIH3Q8TBE1 160 aa9.24□□□□□ -0.93
TRERF1-201ENST00000340840 PSKH2Q96QS6 385 aa9.24□□□□□ -0.93
TRERF1-201ENST00000340840 PANX1Q96RD7 426 aa9.24□□□□□ -0.93
TRERF1-201ENST00000340840 MAGIXQ9H6Y5 334 aa9.24□□□□□ -0.93
TRERF1-201ENST00000340840 RAPGEFL1Q9UHV5 662 aa9.24□□□□□ -0.93
TRERF1-201ENST00000340840 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.24□□□□□ -0.93
TRERF1-201ENST00000340840 GABRQQ9UN88 632 aa9.24□□□□□ -0.93
TRERF1-201ENST00000340840 SCN4AP35499 1836 aa9.24□□□□□ -0.93
TRERF1-201ENST00000340840 STK25O00506 426 aa9.24□□□□□ -0.93
TRERF1-201ENST00000340840 ACSL4O60488 711 aa9.24□□□□□ -0.93
TRERF1-201ENST00000340840 WDR47O94967 919 aa9.24□□□□□ -0.93
TRERF1-201ENST00000340840 ANK1P16157 1881 aa9.24□□□□□ -0.93
TRERF1-201ENST00000340840 AGXTP21549 392 aa9.24□□□□□ -0.93
TRERF1-201ENST00000340840 GGT5P36269 586 aa9.24□□□□□ -0.93
TRERF1-201ENST00000340840 SEPHS1P49903 392 aa9.24□□□□□ -0.93
TRERF1-201ENST00000340840 CDH4P55283 916 aa9.24□□□□□ -0.93
TRERF1-201ENST00000340840 CSNK2BP67870 215 aa9.24□□□□□ -0.93
TRERF1-201ENST00000340840 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.24□□□□□ -0.93
TRERF1-201ENST00000340840 XKR7Q5GH72 579 aa9.24□□□□□ -0.93
TRERF1-201ENST00000340840 AFMIDQ63HM1 303 aa9.24□□□□□ -0.93
TRERF1-201ENST00000340840 FAM151BQ6UXP7 276 aa9.24□□□□□ -0.93
TRERF1-201ENST00000340840 CYHR1Q6ZMK1 362 aa9.24□□□□□ -0.93
TRERF1-201ENST00000340840 BHLHA9Q7RTU4 235 aa9.24□□□□□ -0.93
TRERF1-201ENST00000340840 ZNF605Q86T29 641 aa9.24□□□□□ -0.93
TRERF1-201ENST00000340840 ANKRD46Q86W74 232 aa9.24□□□□□ -0.93
TRERF1-201ENST00000340840 HS3ST5Q8IZT8 346 aa9.24□□□□□ -0.93
TRERF1-201ENST00000340840 UTP15Q8TED0 518 aaKnown RBP9.24□□□□□ -0.93
TRERF1-201ENST00000340840 CAPSLQ8WWF8 208 aa9.24□□□□□ -0.93
TRERF1-201ENST00000340840 MUL1Q969V5 352 aa9.24□□□□□ -0.93
TRERF1-201ENST00000340840 ROGDIQ9GZN7 287 aa9.24□□□□□ -0.93
TRERF1-201ENST00000340840 REXO4Q9GZR2 422 aaKnown RBP9.24□□□□□ -0.93
TRERF1-201ENST00000340840 NSUN3Q9H649 340 aaKnown RBP9.24□□□□□ -0.93
TRERF1-201ENST00000340840 VAPAQ9P0L0 249 aa9.24□□□□□ -0.93
TRERF1-201ENST00000340840 SLC27A5Q9Y2P5 690 aa9.24□□□□□ -0.93
TRERF1-201ENST00000340840 RBMX2Q9Y388 322 aaKnown RBP9.24□□□□□ -0.93
TRERF1-201ENST00000340840 OR1I1O60431 355 aa9.24□□□□□ -0.93
TRERF1-201ENST00000340840 SLC25A14O95258 325 aaPredicted RBP9.24□□□□□ -0.93
TRERF1-201ENST00000340840 CLDN9O95484 217 aa9.24□□□□□ -0.93
TRERF1-201ENST00000340840 RETP07949 1114 aa9.24□□□□□ -0.93
TRERF1-201ENST00000340840 MYCLP1P12525 358 aaPredicted RBP9.24□□□□□ -0.93
TRERF1-201ENST00000340840 IDH2P48735 452 aaKnown RBP9.24□□□□□ -0.93
TRERF1-201ENST00000340840 DAB2P98082 770 aa9.24□□□□□ -0.93
TRERF1-201ENST00000340840 GSTM4Q03013 218 aa9.24□□□□□ -0.93
TRERF1-201ENST00000340840 ACVR1Q04771 509 aa9.24□□□□□ -0.93
TRERF1-201ENST00000340840 TSTA3Q13630 321 aaPredicted RBP9.24□□□□□ -0.93
TRERF1-201ENST00000340840 PON2Q15165 354 aa9.24□□□□□ -0.93
TRERF1-201ENST00000340840 CCL14Q16627 93 aa9.24□□□□□ -0.93
TRERF1-201ENST00000340840 TRIM69Q86WT6 500 aa9.24□□□□□ -0.93
TRERF1-201ENST00000340840 ZNF641Q96N77 438 aaPredicted RBP9.24□□□□□ -0.93
TRERF1-201ENST00000340840 DCSTAMPQ9H295 470 aa9.24□□□□□ -0.93
TRERF1-201ENST00000340840 ERVK-18Q9QC07 812 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms