RNA–Protein interactions for RNA: ENST00000340480.8

HIPK1-201, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene HIPK1, Length 6,997 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-201ENST00000340480 A0A1W2PP18 115 aa7.46□□□□□ -1.21
HIPK1-201ENST00000340480 H3BUI4 141 aa7.46□□□□□ -1.21
HIPK1-201ENST00000340480 CNOT3O75175 753 aaKnown RBP7.46□□□□□ -1.21
HIPK1-201ENST00000340480 TYRP14679 529 aa7.46□□□□□ -1.21
HIPK1-201ENST00000340480 PAICSP22234 425 aaKnown RBP7.46□□□□□ -1.21
HIPK1-201ENST00000340480 RPS14P62263 151 aaKnown RBP7.46□□□□□ -1.21
HIPK1-201ENST00000340480 STX4Q12846 297 aa7.46□□□□□ -1.21
HIPK1-201ENST00000340480 LMAN2Q12907 356 aa7.46□□□□□ -1.21
HIPK1-201ENST00000340480 PDK3Q15120 406 aa7.46□□□□□ -1.21
HIPK1-201ENST00000340480 NDUFA9Q16795 377 aa7.46□□□□□ -1.21
HIPK1-201ENST00000340480 MED27Q6P2C8 311 aa7.46□□□□□ -1.21
HIPK1-201ENST00000340480 TRAM1L1Q8N609 369 aa7.46□□□□□ -1.21
HIPK1-201ENST00000340480 WDR36Q8NI36 951 aaKnown RBP7.46□□□□□ -1.21
HIPK1-201ENST00000340480 SHDQ96IW2 340 aa7.46□□□□□ -1.21
HIPK1-201ENST00000340480 SEPHS2Q99611 448 aa7.46□□□□□ -1.21
HIPK1-201ENST00000340480 DNAAF2Q9NVR5 837 aaKnown RBP7.46□□□□□ -1.21
HIPK1-201ENST00000340480 ZNF232Q9UNY5 417 aa7.46□□□□□ -1.21
HIPK1-201ENST00000340480 TPRKBQ9Y3C4 175 aa7.46□□□□□ -1.21
HIPK1-201ENST00000340480 STON1Q9Y6Q2 735 aa7.46□□□□□ -1.21
HIPK1-201ENST00000340480 RASGRP1O95267 797 aa7.46□□□□□ -1.21
HIPK1-201ENST00000340480 HSD3B1P14060 373 aa7.46□□□□□ -1.21
HIPK1-201ENST00000340480 ATP1B2P14415 290 aaPredicted RBP7.46□□□□□ -1.21
HIPK1-201ENST00000340480 HSD3B2P26439 372 aa7.46□□□□□ -1.21
HIPK1-201ENST00000340480 FEN1P39748 380 aaKnown RBP7.46□□□□□ -1.21
HIPK1-201ENST00000340480 BLMHQ13867 455 aa7.46□□□□□ -1.21
HIPK1-201ENST00000340480 AFMIDQ63HM1 303 aa7.46□□□□□ -1.21
HIPK1-201ENST00000340480 ZNF621Q6ZSS3 439 aa7.46□□□□□ -1.21
HIPK1-201ENST00000340480 CHSY3Q70JA7 882 aa7.46□□□□□ -1.21
HIPK1-201ENST00000340480 BNIPLQ7Z465 357 aa7.46□□□□□ -1.21
HIPK1-201ENST00000340480 MICU2Q8IYU8 434 aa7.46□□□□□ -1.21
HIPK1-201ENST00000340480 POF1BQ8WVV4 589 aa7.46□□□□□ -1.21
HIPK1-201ENST00000340480 PANX1Q96RD7 426 aa7.46□□□□□ -1.21
HIPK1-201ENST00000340480 BCL2L14Q9BZR8 327 aa7.46□□□□□ -1.21
HIPK1-201ENST00000340480 REEP1Q9H902 201 aa7.46□□□□□ -1.21
HIPK1-201ENST00000340480 PSMD11O00231 422 aa7.46□□□□□ -1.22
HIPK1-201ENST00000340480 LDB2O43679 373 aa7.46□□□□□ -1.22
HIPK1-201ENST00000340480 OR10H2O60403 315 aa7.46□□□□□ -1.22
HIPK1-201ENST00000340480 BCAS2O75934 225 aaPredicted RBP7.46□□□□□ -1.22
HIPK1-201ENST00000340480 SEC24DO94855 1032 aaPredicted RBP7.46□□□□□ -1.22
HIPK1-201ENST00000340480 PRPS1L1P21108 318 aa7.46□□□□□ -1.22
HIPK1-201ENST00000340480 IDSP22304 550 aa7.46□□□□□ -1.22
HIPK1-201ENST00000340480 WDR5P61964 334 aaKnown RBP7.46□□□□□ -1.22
HIPK1-201ENST00000340480 LIPEQ05469 1076 aa7.46□□□□□ -1.22
HIPK1-201ENST00000340480 CHIT1Q13231 466 aa7.46□□□□□ -1.22
HIPK1-201ENST00000340480 CCSAPQ6IQ19 270 aaPredicted RBP7.46□□□□□ -1.22
HIPK1-201ENST00000340480 CDC73Q6P1J9 531 aa7.46□□□□□ -1.22
HIPK1-201ENST00000340480 FAM92BQ6ZTR7 304 aa7.46□□□□□ -1.22
HIPK1-201ENST00000340480 STK32CQ86UX6 486 aa7.46□□□□□ -1.22
HIPK1-201ENST00000340480 HCAR2Q8TDS4 363 aa7.46□□□□□ -1.22
HIPK1-201ENST00000340480 FAR1Q8WVX9 515 aa7.46□□□□□ -1.22
HIPK1-201ENST00000340480 THAP11Q96EK4 314 aa7.46□□□□□ -1.22
HIPK1-201ENST00000340480 SCRN2Q96FV2 425 aa7.46□□□□□ -1.22
HIPK1-201ENST00000340480 AKTIPQ9H8T0 292 aa7.46□□□□□ -1.22
HIPK1-201ENST00000340480 TIMM22Q9Y584 194 aa7.46□□□□□ -1.22
HIPK1-201ENST00000340480 SNX8Q9Y5X2 465 aa7.46□□□□□ -1.22
HIPK1-201ENST00000340480 H3BNX3 289 aa7.46□□□□□ -1.22
HIPK1-201ENST00000340480 MTRF1O75570 445 aaKnown RBP7.46□□□□□ -1.22
HIPK1-201ENST00000340480 PIK3CBP42338 1070 aa7.46□□□□□ -1.22
HIPK1-201ENST00000340480 ZNF140P52738 457 aaPredicted RBP7.46□□□□□ -1.22
HIPK1-201ENST00000340480 KRR1Q13601 381 aaKnown RBP7.46□□□□□ -1.22
HIPK1-201ENST00000340480 ELOAQ14241 798 aaKnown RBP7.46□□□□□ -1.22
HIPK1-201ENST00000340480 CPTPQ5TA50 214 aa7.46□□□□□ -1.22
HIPK1-201ENST00000340480 CDCA3Q99618 268 aaPredicted RBP7.46□□□□□ -1.22
HIPK1-201ENST00000340480 CPEB1Q9BZB8 566 aaKnown RBP7.46□□□□□ -1.22
HIPK1-201ENST00000340480 POLMQ9NP87 494 aaPredicted RBP7.46□□□□□ -1.22
HIPK1-201ENST00000340480 B4GALT6Q9UBX8 382 aa7.46□□□□□ -1.22
HIPK1-201ENST00000340480 AP4B1Q9Y6B7 739 aa7.46□□□□□ -1.22
HIPK1-201ENST00000340480 OAS3Q9Y6K5 1087 aaKnown RBP7.46□□□□□ -1.22
HIPK1-201ENST00000340480 TP73O15350 636 aa7.46□□□□□ -1.22
HIPK1-201ENST00000340480 IGLV3-27P01718 113 aa7.46□□□□□ -1.22
HIPK1-201ENST00000340480 ATF6P18850 670 aa7.46□□□□□ -1.22
HIPK1-201ENST00000340480 HOXD9P28356 352 aaPredicted RBP7.46□□□□□ -1.22
HIPK1-201ENST00000340480 ADGRE1Q14246 886 aa7.46□□□□□ -1.22
HIPK1-201ENST00000340480 SUZ12Q15022 739 aaKnown RBP7.46□□□□□ -1.22
HIPK1-201ENST00000340480 LRRC66Q68CR7 880 aa7.46□□□□□ -1.22
HIPK1-201ENST00000340480 HID1Q8IV36 788 aa7.46□□□□□ -1.22
HIPK1-201ENST00000340480 NRSN1Q8IZ57 195 aa7.46□□□□□ -1.22
HIPK1-201ENST00000340480 TTC9BQ8N6N2 239 aa7.46□□□□□ -1.22
HIPK1-201ENST00000340480 AUTS2Q8WXX7 1259 aa7.46□□□□□ -1.22
HIPK1-201ENST00000340480 RPL10LQ96L21 214 aaKnown RBP7.46□□□□□ -1.22
HIPK1-201ENST00000340480 RSPH9Q9H1X1 276 aaPredicted RBP7.46□□□□□ -1.22
HIPK1-201ENST00000340480 SMCHD1A6NHR9 2005 aa7.46□□□□□ -1.22
HIPK1-201ENST00000340480 EPHX1P07099 455 aa7.45□□□□□ -1.22
HIPK1-201ENST00000340480 ZCCHC18P0CG32 403 aa7.45□□□□□ -1.22
HIPK1-201ENST00000340480 FSHRP23945 695 aa7.45□□□□□ -1.22
HIPK1-201ENST00000340480 NDUFS1P28331 727 aa7.45□□□□□ -1.22
HIPK1-201ENST00000340480 ARCN1P48444 511 aaKnown RBP7.45□□□□□ -1.22
HIPK1-201ENST00000340480 ADARP55265 1226 aaKnown RBP7.45□□□□□ -1.22
HIPK1-201ENST00000340480 OGFOD2Q6N063 350 aa7.45□□□□□ -1.22
HIPK1-201ENST00000340480 DNAJC14Q6Y2X3 702 aaPredicted RBP7.45□□□□□ -1.22
HIPK1-201ENST00000340480 DET1Q7L5Y6 550 aa7.45□□□□□ -1.22
HIPK1-201ENST00000340480 TREML1Q86YW5 311 aa7.45□□□□□ -1.22
HIPK1-201ENST00000340480 SLC30A8Q8IWU4 369 aa7.45□□□□□ -1.22
HIPK1-201ENST00000340480 KDM1BQ8NB78 822 aa7.45□□□□□ -1.22
HIPK1-201ENST00000340480 PDLIM5Q96HC4 596 aaKnown RBP7.45□□□□□ -1.22
HIPK1-201ENST00000340480 ZNF778Q96MU6 729 aa7.45□□□□□ -1.22
HIPK1-201ENST00000340480 PKMYT1Q99640 499 aa7.45□□□□□ -1.22
HIPK1-201ENST00000340480 CCM2Q9BSQ5 444 aa7.45□□□□□ -1.22
HIPK1-201ENST00000340480 KLHL25Q9H0H3 589 aa7.45□□□□□ -1.22
HIPK1-201ENST00000340480 SFXN1Q9H9B4 322 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms